Cygnus atratus (black swan): 118253817
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Entry
118253817 CDS
T09349
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118253817 (DENND4C)
Membrane trafficking [BR:
cata04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118253817 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
118253817
NCBI-ProteinID:
XP_035414502
LinkDB
All DBs
Position
Z:36330735..36408117
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AA seq
1953 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLLDQEISRQETKSTGPKAPITDIAVIIKSAGETVP
EGYTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKERIISGCEVI
QATPYGRCANVNNSSTSSQRIFITYRRAPPIRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPASNSIAYKAGLIFRYPQENYESFPLSESVPLFCLPMGA
TIECWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQLQLGLLTAVE
RKVVTSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGADFSTLLMNLGPENCATLLLFVLLEGKI
LLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPVPFIVGVDSRYFDLY
DPPQDIVCIDLDTNMVYISDDKKSTNWKQFPKKPCKSLLSTLKKLHPQLAAVHKKTPEGS
AVEMTPIEADFSWQKKMTELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYTKFYTHLTKTQIFSSFIEECSFVSDKDTGLAFFDDCIEKLFPDKGT
EKGDKVDVDSVEDARLIELDESQKSEHTVFIMPPEPPPDDGQDRAPKYSYKNFPRLDFKL
FDRPQELTLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKYYVSPPQWAKCLYSHS
YSLWFICLPAYIRVAHPKVKALQQAYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESPWPSSNRSGIFLWTKVRNVVRGTAQFRQCL
KKATQSPRVPVISALRNTTGGSDGDMVSHGSVDSSNDANSGEHTLFVSDLVRLDSNDNHS
STGGQSDQGYGSKDELLKDDGDSLLATETQMEQDISSKAEELIGDVCIEESDENKQLNIE
THSPTDTPAWGNSIVKVPSGIFDSIGRKNSGETGSSPLFITQDSVEDVVFGDVSPKKISE
KGQKRQKLFSERSCSFSSESRAGMLLKKGSLDLHSREIAIMMGADAKILTAALSGAKTSP
CHMNKSHSFDSAVDQQVSGKGGSWSRVTDSDWELEHRTSPVLEEPGEGQEHFENGRDENA
SNVEEMNIEQLAESKNQKTESKDAAPKRNSFYGVVKPIEREDVEVGLDPLSLLATDSIQP
RLPEPEEKLVSPVAARNLADEIESYMNLKNPLGSKFPSMELHKPGREAEAPGSPAHSQER
RSSLPLDSIPPSSESYENRRSPSVSRSKTFTGRPKQQMHPRIQKERSSSLTGLGRSSPHG
SLGSVVTTLSNLKLDNILSGPKMDVLKSGMKQAANVASKMWGVVTSVYNYSDDEEENSRP
DFNFPAGFEDNILGDNLSSRSGVPGLIANELGQSTTSLGSSSSSGDAGRQHYSAGEASFP
RSMKVPDSEKSELSSSHNTSLSSIFQNYAMEVLMSSCSQCRACGALVYDEEIMAGWTPND
SNLNTTCPFCKSTFLPLLNVEFKDLRGSASFFLKQSTSGDSLQSGNTPLTTDPLEQKLLS
GPAVADLISFSDHPQSSHAIAEENSPASEQSDVAEEQSKDPRTMKTSTSNPPKRGVSLTR
SHSVGGPLQNIDLSQRPSHGISTVSLPNSLQEVVDPLIKRPNPLPVSVPYLSPLVLRKEL
ESLLENEGEQVIHTSKFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNDGVQLPLT
SLAQDSKLVYIHLLWDNINLHQEPGEPLYISWRNLNSSEKRLSTVAEDQQAVNTLLENIK
LSIQHNNVVKPIHLLLQNVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLAHK
NLPKDDLEKMQKIDAPPSSRVEYCRKYFGAPFI
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccacgagtggctgactattttgtagtggcaggactcactgat
acagatactgcaaccctcctggaccaagaaataagccgccaggaaacaaagtcaactggt
ccaaaggctccaattactgacattgctgtgatcattaaatcagctggtgaaactgtccca
gagggatacacctgtgttgaagctacccctacagcccttcaagccaacctaaactatgga
agtcttaagagccctgaactttttctctgctacaagagaggccgagacaaaccacctctt
actgacattggagttctgtatgaaggcaaggaacgtatcatttcaggctgtgaggtgatt
caagcaactccttatggtcgttgtgctaatgttaacaatagttcaacgtcttctcagagg
atctttatcacatatcgaagggctcctccaatacgacctcaaaattcattggcagtgaca
gatatctgtgttattgttaccagcaaaggagaaacccctcctcatacattctgcaaagtt
gataagaatttaaattgtggtatgtggggttccagtgtatacctttgttataagaagtct
gtgccagcttctaactccatagcgtataaagctggcttaattttcagataccctcaagag
aactatgagtcattcccattgtcagaatctgtacctctcttctgccttcctatgggagct
actattgaatgctgggaccctcaaaccaaatatccactaccagtgttctcaacgtttgta
ctgacctgttcttctgcagaaaaggtttatggtgctgctattcagttttatgagccttat
ccccgggagctgctaacagaaaagcaacaattgcagctgggtctcttgacagctgtagag
aggaaagtggttacttccaagtccatcaattctaataaatgtatctgccttctctcacat
tggcctttctttgaagcatttcgaaaattccttatgttcatctacaaactgtctgtctct
ggacctcatcctcttcccattgaaaagcacatatcccattttatgcacaatatacctttc
ccttcaccacaaaggccaagaattcttgtgcagctttctgcccatgatgcattaatattg
tctcagccagtttctacaccattaccactaagtggagcagacttcagtactctactcatg
aatcttggaccagaaaactgtgccaccctgctactctttgtgttattagaaggcaagatt
ctccttcattctcttagaccagctgtattgacaggagttgctgaagctgtagtagctatg
atatttccatttcagtggcaatgtccatatatccccctatgtcctttgtctctggccacc
gtactcagtgcacctgttccatttattgttggagttgattcacggtattttgatctgtat
gatccaccacaggacattgtgtgcattgacttagacacaaacatggtgtacatatcagat
gataagaagagcacaaactggaagcagtttcctaagaagccatgtaaaagtctgctcagc
accttaaagaaactgcacccacagctggcagcagttcacaagaaaactccagaaggctca
gccgtggagatgactcctatcgaggcagatttctcctggcagaagaagatgacagaactc
gagatggagatccaggaagctttcctacgtttcatggcatctattttaaagggttacaga
acgttcctcaaaccaatcacccaggcaccttcaaataaagcaactgctgctgattccttg
tttgatcatcaaggatttttaaaaagcagagaccgtgcctatacgaagttctacacgcat
ctcaccaaaacgcagatattcagcagctttattgaagagtgcagttttgtgagtgacaag
gatactggcttggcattttttgatgactgcatagaaaagctctttccagataaaggaaca
gaaaaaggagacaaggttgatgtagattctgttgaagatgcacggttgattgagcttgat
gagtcacaaaaaagtgaacacacagtgtttataatgccaccagaacctccccctgatgat
ggacaagaccgagcaccaaaatacagctataaaaactttccacgactagatttcaagctc
tttgacaggcctcaggaactcacgctctccttcagcagacacccagctggaagcagcatt
tcaaatagtccggcactcatggcaaagaggacaaaacaggaaataaaaacagcccataag
ttagccaagaagtattatgtaagccccccacagtgggctaaatgtctctacagtcacagt
tacagcttatggtttatttgtctgccagcctacatcagagttgcacatcccaaggtgaaa
gcactgcagcaggcatatgatgttctaattaaaatgaggaaaactgatgtggaaccacta
gatgaggtgtgctacagagttgtgatgcaactctgtggactgtggggtcagcctgttcag
gccgtgagagtcctcttcgaaatgaaaaatgctggaatacagccaaatgctattacttat
ggctattacaataaggcagtcttagagtctccttggcctagcagtaaccgcagtggcata
tttctgtggacaaaggtacgaaatgtagttcgcggcacagcgcaatttaggcagtgccta
aagaaagcaacgcagagcccacgagtacctgtgatctcagctctgcggaataccacgggt
ggaagtgatggggacatggtgagccatggtagcgtggatagttctaatgatgctaacagt
ggggagcacactctcttcgtcagtgacttagtcaggcttgattccaatgataatcactct
agcacaggtggtcagtcggatcagggctatggatccaaggatgaacttctaaaggatgac
ggagatagtcttcttgcaactgaaacacaaatggagcaagacatttcttctaaagctgaa
gagctaataggagacgtttgcattgaggaatctgatgaaaataaacagctgaatatagag
actcatagtccaacagacacacctgcctggggtaacagtatcgtcaaagttccatctggc
atttttgatagcattggaaggaaaaacagtggtgaaactggttcaagcccgctgttcata
actcaggattcagttgaagatgtggtctttggtgacgtttctccaaagaaaataagtgaa
aaaggacagaagaggcagaagctgttttcagagagaagctgcagtttcagcagtgaaagc
agggcaggaatgctgctgaaaaaagggagcttggacttgcattccagagaaatagcgata
atgatgggagcagatgccaagattttaacagcagctttatctggggccaaaacttcacct
tgtcatatgaataaatcccatagttttgatagtgctgttgaccagcaggtctctggcaaa
ggtggctcttggagtcgtgtgactgatagtgattgggaattggagcacagaacttcacca
gtgctggaagaacctggggaagggcaggagcattttgagaacggaagagatgaaaatgca
tccaacgtggaagaaatgaacattgaacagttagctgagtccaaaaaccagaaaacggaa
tccaaagatgcagctcctaaaaggaatagcttttatggagtggttaaacctatcgaaagg
gaagatgttgaagtgggcttggatcctttatctttgctggctactgacagcatccaacca
agactccctgaaccagaggaaaagctggtgtcaccagttgcagcacgcaatttggcagat
gaaatagagagctatatgaatctcaagaacccactgggcagtaagtttcccagcatggaa
ctgcacaagccaggtagggaagcagaagcccctggttcacctgctcactcccaggaacgg
aggtcaagcctgcctttggattccatcccaccatcgtctgagtcctatgaaaatcgcaga
agtccttctgtctccagatccaaaacatttactgggcgaccaaaacaacaaatgcatcca
cggattcaaaaggagcgttcttcatctttgacaggactgggtcgttcttctccacatggc
tccttaggatcagttgtaacgactttatccaatctgaagttagacaatatactgtctgga
ccaaaaatggatgttctgaaatcaggcatgaaacaggctgccaatgtggccagtaagatg
tggggagttgtaacttcagtgtataactactcagatgatgaggaagaaaacagtcgacca
gactttaacttccctgctggttttgaagataatattttaggagataatctgtcatcaaga
tctggagtcccaggactaattgcaaatgaacttggccaaagcactactagtcttggcagt
agcagtagcagtggagatgcaggaagacagcattacagtgcaggtgaagcttcattccca
agaagtatgaaagttccagattctgagaagtcagagctcagctcttctcataatactagt
ttatccagcattttccagaactatgcaatggaggtattgatgtcaagctgctctcaatgt
agagcttgtggtgctttggtttatgatgaagaaatcatggctggatggacaccaaatgat
tcaaacttgaacactacctgtcctttctgtaaaagtaccttcctacctttacttaatgtt
gaatttaaagacctacgtggctctgcaagcttcttcctgaagcaaagtacctcaggagat
agtttacagagtggtaatactccattaaccacggatcctctggaacagaaattgttgtcc
ggtccagctgttgctgatttgatcagtttttccgatcacccacagtccagccatgccata
gctgaagaaaacagccctgcatctgagcagagtgatgtggcagaagaacagagcaaagat
cccagaacgatgaagacatctaccagtaatccaccaaaaaggggagtgtctttaactcgg
agccacagtgttggaggtccactgcaaaacattgatctttcccagagaccgtctcatggc
atttcaacagttagtcttccaaatagtttgcaagaagttgtggatcctttaataaaaaga
cctaaccctctgcctgtatctgtaccctacttgagccctttggtactgcgtaaggagctt
gaatcactactggaaaatgagggagagcaagtaattcatacatccaaattcattaatcag
catcccataattttctggaacctagtctggtattttcgacggttggacctacctagcaac
ttacctggactcattctaacatctgaacattgtaatgatggagtgcagcttcctttgaca
tctctcgctcaagatagcaagctagtatacattcatcttctgtgggacaacatcaacctc
caccaagagcctggggagcctctgtatatatcttggagaaatctcaattcttctgaaaag
agactgtccacagtggcagaagatcagcaggcagtgaacactttgttggagaacatcaaa
ctaagtattcaacacaacaatgttgttaagccaatccacctccttctacagaacgttaaa
ccagatgtgaaacgacaaaggagtttttacagagaaatccttttcctatctctggtttct
cttggaagagagaacattgacattgaggtctttgatagtgaatacagacttgcacataaa
aatctaccaaaggatgatcttgaaaagatgcagaaaatagatgctccaccaagcagcaga
gttgagtattgcaggaagtactttggagcaccttttatataa
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