Cygnus atratus (black swan): 118253917
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Entry
118253917 CDS
T09349
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118253917 (RHBDL3)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
118253917 (RHBDL3)
Peptidases and inhibitors [BR:
cata01002
]
Serine peptidases
Family S54: Rhomboid family
118253917 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
DUF5580_M
EF-hand_11
EF-hand_8
AIF-1
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
118253917
NCBI-ProteinID:
XP_050570325
EnsemblRapid:
ENSACYG00000004871
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All DBs
Position
18:8923310..8983035
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AA seq
435 aa
AA seq
DB search
MGDRLPEPHASSSPAVAASSEAEEIEVLDSEDVLPMAAEDHWKALFDQRASCSCRQALKG
EESSWDEAQIRKQAEMFDPDNTGYISTEKFRSLLQRHGSELDPHKLEVLLALADSNSEGR
ICYQDFVNLMSNKRSNSFRQAILQGNRRLCSKALLEETGLSLSQRLIRHVAYETLPREID
RKWYYDSYTCCPPPWFMITITIVEVAFFLYNGVVLDRFVLQVTHPLYLKNALLYHPQLRA
QAWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGAARISFVYVAGVVAGSLAVSVAD
MTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSFEFGRAVWLRFHP
SAYPPCPHPSFMAHLGGVMVGITLGVIILRNYEQRLQDQTLWWIFLSIYLIFVVFAIFWN
IFAYSLLDLKLPPPP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaggctgccggagcctcacgccagctcttcccctgccgtggctgccagctca
gaagcggaagaaatcgaggtgctcgactccgaggatgtcctacctatggccgcagaggat
cactggaaagccctatttgatcagagagctagctgttcctgcaggcaggcactaaaggga
gaggagagcagctgggatgaagcacaaatcaggaagcaggctgaaatgtttgatcctgac
aacactggctacatcagcaccgagaagtttcgttcccttctccagagacacggctcagag
ctggacccccacaagctagaggtcctcctggccctggcagacagcaactcagaggggagg
atctgctaccaggacttcgtcaacctgatgagcaacaaaaggtcgaatagtttccgccaa
gccatccttcaggggaacaggaggctgtgcagcaaggcgctgctggaggaaacagggctg
agcctgtcacagaggctgatccggcacgttgcgtatgagaccctgccacgagagatagac
cgcaagtggtactatgacagctatacctgctgccctccaccctggttcatgattaccatc
actattgtagaggttgcctttttcctttacaacggagtggtattagacagatttgtgctc
caagtcacccatcccttatacctgaagaacgcactactttaccatcctcagctccgtgct
caggcttggaggtacctaacctacatattcatgcatgcagggatagaacacctgggactc
aacgttgtccttcagctcctggttggggttcccctggaaatggtgcatggagctgcaagg
atcagctttgtgtatgtcgctggagttgtagcaggatccctggcagtgtcagtagccgat
atgactgcgcctgtggtgggctcctccggaggcgtgtatgcacttgtctcagctcacttg
gccaatatagtcatgaactggtcaggaatgaagtgccaattcaaactgctgcgcatggct
gttgccttgatctgtatgagttttgaatttggaagagctgtgtggctgcgattccatccc
tctgcttaccctccatgcccacaccccagcttcatggctcacctgggaggggtgatggtt
ggaatcacccttggagttatcatcttgaggaactatgagcagagactccaagatcagact
ttatggtggatcttcctttctatttatctcattttcgtggtgtttgccatcttctggaac
atttttgcctacagtctgttggatctgaaactacctccccctccttga
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