Cygnus atratus (black swan): 118254001
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Entry
118254001 CDS
T09349
Symbol
TRIM65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118254001 (TRIM65)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118254001 (TRIM65)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
SPRY
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_2
PRY
zf-RING_5
zf-B_box
zf-C3HC4_3
zf-RING_6
U-box
EzrA
Leu_zip
Apolipoprotein
YkyA
DUF4446
Motif
Other DBs
NCBI-GeneID:
118254001
NCBI-ProteinID:
XP_035414831
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Position
18:5445814..5449719
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AA seq
518 aa
AA seq
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MALPVSPNLAEKLVCSICLELFTVPVTLPCGHNFCERCIGDHRSKQEQAAAGAKRGYPCP
ECRWSCEPQLELKKNVTLCSVVELARAGKAWVQRCEVADGGLCPRHGRPLELYCEEEQRC
ICCVCTVQQCQRHRRALFEDERSRKQALLEKSLKEAQEESEKIERALQELEERTQSIKDS
SEGLRSVILSKFTHLEKGLEAFRCQMVAKVEQELVAALGRVEEDSSTLKDHLDTLRQHQE
QARHLLACTADHRTFLEEFPLLPAWESLAVPPPVQFDAAGVVEPVSEILAGISRLLLEDL
PNAVAPKAPDPVVPGPVQPKGTEMKAATPLPKCQIRAELLKDHRNLTFDPDTANKYLELS
KGHRRAKHGTGAAGGWQERGSPFEPWQVLCVQGYRQGCHYWEVTISSHSVILGVTYRSLP
RQQLPGHKFSIGLDGGSWGLQVREDSYLAWHKGREEKIQQRLYAELGVRLDYGRGLLSFY
GLGEETQLIHCFHAVFTEPLYPVFWLCEGRTITLGHRD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctctgccagtctcgccgaatctggcggagaagctggtgtgctccatctgcctggag
ctcttcacggtgcccgtcaccttgccctgcggccacaacttctgcgagcggtgcatcggc
gaccacaggagcaagcaggagcaggcggccgccggggccaagcggggctacccgtgcccc
gagtgccgctggagctgcgagccccagctggagctgaagaagaacgtgaccctgtgcagc
gtggtggagctggcgcgggcgggcaaggcgtgggtgcagcggtgcgaggtggccgacggc
gggctgtgcccgcggcacgggcgcccgctggagctgtactgcgaggaggagcagcggtgc
atctgctgcgtctgcaccgtgcagcagtgccagcggcaccggcgggcgctcttcgaggac
gagcgctccaggaagcaggcccttctggaaaagtccctgaaagaagcccaggaggagtcg
gagaagatcgagcgggcgttgcaggagctggaggagcgaacgcagagcatcaaggactcc
tccgaggggctcagatcagtgatcctgagcaaattcacccacctggagaaaggcctggag
gctttccggtgtcagatggtggccaaggtcgagcaagagctggtggcggcgctggggcgg
gtggaggaggactccagcaccctgaaggatcacctggacaccctcagacagcaccaggag
caggcacggcacctgctggcctgcaccgcggaccacaggaccttcctcgaggaattcccc
ctgctcccggcctgggagagcctggcggtgccgcccccggtgcagtttgacgcggccggt
gtggtggagcccgtcagcgagatcctcgccggcatctcccggctcctgctggaggatttg
cccaatgccgtggcccccaaagcccccgaccccgttgtcccaggcccggtgcagcccaag
gggacagagatgaaggcggcgacccctctccccaagtgccagatccgagctgagcttctg
aaggaccaccgcaacctcaccttcgatcccgacacggccaacaagtacctggagctgtcg
aagggccaccggcgagccaagcacggcaccggcgccgcgggcgggtggcaggagcggggc
agccccttcgagccctggcaggtgctgtgcgtgcagggctacaggcagggctgccactac
tgggaggtgaccatctccagccactccgtcatcctgggggtgacataccgcagcctcccc
cggcagcagctgccgggtcacaagttcagtatcgggctggacgggggctcatgggggctg
caggtgcgggaggacagctacctggcctggcacaagggccgggaggagaaaatccagcag
cggctctacgccgagctgggggtccgcctggattacggccgggggctgctttccttctac
gggctcggggaggagacgcagctcatccactgcttccacgccgtcttcaccgagccgctc
taccccgtcttctggctgtgcgagggccgcaccatcacgctgggccacagggactga
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