Cygnus atratus (black swan): 118254016
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Entry
118254016 CDS
T09349
Symbol
UTP6
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118254016 (UTP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cata03009
]
118254016 (UTP6)
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118254016 (UTP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
TPR_14
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
FadR_C
Motif
Other DBs
NCBI-GeneID:
118254016
NCBI-ProteinID:
XP_035414865
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Position
18:complement(8785347..8797707)
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AA seq
597 aa
AA seq
DB search
MAERIEQRLEDRIPELEQLERVGLFTPKEIRAVLRKASALEYKIQRRALRKEDFVNYIQY
EINLLELIKRRRARIGYSFKKEEIESSIVHRVHSLFKRATGKWKEDVQLWLSHVAFCKQW
NAKHQLSKVFSTMLAIHSNKPALWIMAAKWEMETRLSSESARHLFLRALRFHPECPKLYQ
EYFRMELMNAEKQRKEKKEFEQAKMDLGEFSYSEEILNGELARIIYRDAAQKIKGVEFHL
AVLSIAKLFDFTQDLQKEILESLQTEYADDPLTWDYMARRELDLGSLKSTEPTTKQMKVS
EITQREERCCAVFEEAVTAVPTEDMWKCYITFCLERCNRKTNSEELKQKRLERTLSVFSK
AHESSLLLESLYKQWLQLLLESNLSEKATEVAEAATKRFSLSAEMWQMRLQVLIQLKNDN
VTQCFQEAFKHLKSKGTLPLWALWVEWSEGTNSKQDTEALYQRSLHATAPAESVTMKEKY
LDWAYRNGGYKKVKRVFTSLHENRPLSLDFFRKMIQIEKEQESCKMLHLREYYERALREF
GSTESDLWLDYIKEELSHPQGKPENCGSIHWRAVKMLQGDQVEDFISKYTLLQTGHL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcatcgagcagcggctggaggaccgcatcccggagctagagcagctggag
cgggtcggcctcttcacgcccaaggagatcagggctgtcctcaggaaggcctcggctctg
gaatacaagatccagcggagagctcttcggaaggaggattttgtcaattatattcagtat
gaaattaacctgctggaactgatcaagagaagaagagcacgcattggatattcatttaag
aaggaagaaattgaaagctctattgtgcatagggtccatagcctcttcaaacgtgccaca
ggaaaatggaaagaagatgttcagctttggctgtcacatgttgcattttgcaagcagtgg
aatgcaaaacatcagcttagcaaggtgttttctactatgttggccattcattccaataaa
ccagcactgtggattatggcagcaaaatgggaaatggagacacgactctcatcagaaagt
gctaggcacttgttccttcgtgctttgcgcttccatccagagtgtccaaaactttatcaa
gagtatttcagaatggagctgatgaatgctgaaaaacagaggaaggaaaagaaagaattt
gaacaagcaaagatggacttgggggaattcagttattctgaagagattcttaatggggag
ctggctcgcataatctacagggatgctgctcagaaaattaaaggtgttgagttccatctg
gctgtgctttctattgcaaagctttttgattttacccaagatttgcaaaaagaaattctt
gaaagtttgcagactgaatacgccgatgatcctcttacgtgggactacatggcccgtcga
gagctggatctggggtccctgaagtccacagaacccactacaaaacagatgaaagtatcc
gaaatcacacagagggaggaacggtgctgtgcagtctttgaagaggctgtgacagctgtc
cccacagaggacatgtggaaatgctacatcactttttgcttagagagatgtaacaggaaa
accaacagtgaagaattaaagcaaaagagactggagaggacactaagtgtgttcagcaaa
gcgcatgagtccagtttgctgctagaatctctctataagcagtggcttcaactattactg
gagtccaacctttctgagaaggctacagaggtggcagaagccgcaactaagcgcttcagc
ctgtcagcagaaatgtggcagatgaggctgcaggtgttgatccaactgaagaatgacaat
gtgacccagtgttttcaagaagcctttaagcacttgaaatctaagggcactttgccgtta
tgggccctctgggtggaatggagtgaaggcacaaatagcaagcaagacacagaagctctc
taccagagatccttgcatgccacagctcctgctgaatctgtgactatgaaagaaaaatat
ctcgactgggcttataggaatggtggttataagaaagtaaaaagagtctttaccagccta
catgaaaatcgtccactttcacttgacttcttcaggaagatgattcaaatcgaaaaggag
caagaatcctgcaaaatgcttcatctgagagaatactatgaacgtgccttgagagagttt
ggttcaacggagtctgatctctggctggattatatcaaagaggaactaagtcatccccaa
ggcaaaccagaaaactgtgggagtattcactggcgagctgtgaagatgttgcagggagat
caggtggaagacttcatttccaaatacactttattgcaaactggacatttatga
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