Cygnus atratus (black swan): 118254017
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Entry
118254017 CDS
T09349
Name
(RefSeq) ATP-binding cassette sub-family A member 10-like
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
cata
Cygnus atratus (black swan)
Pathway
cata02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118254017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cata02000
]
118254017
Transporters [BR:
cata02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
118254017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
Rad17
SMC_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
118254017
NCBI-ProteinID:
XP_035414866
LinkDB
All DBs
Position
18:complement(10412742..10434243)
Genome browser
AA seq
1626 aa
AA seq
DB search
MRRLQRNLSVFQQTKILLWKNVLIKWRMKMQSFQEWMLSLLFLPLMFIVGNFMLHIPYPE
VPHSYLGQLDDPAYDAAGVTIAFTPITPTTRQIMNAVALKSVMTGIKLEAMDSERALEEA
WILNNEIIGVVFKNNFSYYLRFPTGNVAIPNDNLGYVDTCYNFSARYCDSPKYWYKGFLS
LQSSIDAAIIEVVANHSVWEEMKSIAGVRMKSRSVIYSITLEYSYFMITIVMCFSSFMYF
LSMNVVRERKKLKVLMKTMGLQDIAFWLSWSLLYAVYVLVLSCLLTALVVQEAFYVSSFP
AVLLLFFLYGLACIHMVFMLCSLLRTSKLAGSMGFLITFLFGCLSLAVLIENLPEPLKWF
LGLFCPFAFNAGIAKVFHLEKYGIGFSFSNLMEESYFLFSTYIMLIFDSVLYMLLAMYFD
KVLPGKYGIPDPPFFCLKPSYWMRSRRGCPGEGPYSAGSPEEPPGDEVEPVPTAFVGKEA
IRLNNIKKAYKKKDKKTEALRGLSLNIYEGQITALLGHSGAGKTTLLNVLSGLTLPSEGS
ATIYDYKLSEIGDREEIKEMIGICPQFNVQFEVLTVKENLRTFAEIKGIKSKEVEREVQT
ILELLDISNVQDTQAEKLSGGQKRKLSIGIAMLGSPQVLLLDEPTAGLDPLSRHQVWSLL
KEHRAGRVILFSTQFMDEADILADRKAFISHGRLKCVGSSLFLKKKWGIGYHLRIHVSES
CNTESVTSLVKQHIPNVIFSGHGQYELRYKLPLENVNKFPDLFRGLDSCSDRGIINYGVS
MTTLEDVFMRLEEDDTLGQEDEHVPGEEWAEAGPRCPDETEPGSLLLSGTGKATVSGAVL
WRQQVSAMAWVHFLKLKGSVKNLRSILLLYVVFLLPLVLQLALVAAWQSMSAWELSSARY
FMPLGKRAPAETTSLLVHNSTGSGIEDFIHTLESQDLSVEITSQENITEELKHNGAIKVS
REGQSYRFTILCHMEAVNCFPVLVNIISNALLRALNSTAHIRIWSHPFFSIDNPRFWDYF
VSFYLIYMLLLFPGFPPHFAMGYLQDYKTGARAQLRVSGLFPSAYWCGQALVDVPLCWLL
LFSMFGLQFAMSNRISGSIGNIFLLVMGALGYGVSIVLFIYLISFLFRKGWNCDFWSFIL
IVVCLVSFIISRVMDYTLDMSVSLYLMSLLIPLYPLLGVMINSEQIFVEDADLIAASPRN
DVLIAVFAPYIHSVGFIFLLRYLEIKYGRTVLRKDPVFRISPRNESSHQHLEEQEEEDED
VKAERAAVRNAMVAPSQEEKSVIIVSNLCKEYKTKKAGSVFKKKKKMATKNISFCVNKGE
VLGLLGPNGAGKSTAIKMIAGETTPTAGQVLLRRREGATCCLQDHLGHCPQEDPLWPDLT
VHQHLQVYAAVKGVRKEDTAAAVNRIVNALELQDYLKKSARKLSAGITRKLCFAMCALGN
PTVLLLDEPSTGMDPKGQRCVWKTIRAALKTKETGAVLTTHYMEEAEAVCDRVAILVAGQ
LRCIGSIQYLKSKFGKGYLLEIKIKDPESTDLLHAEILRIFPSAARQERFPSLLVYKVPM
EDALPLSQSFSKLEEAKQNFSLEEYSFSLNTLAQVFLELSREQEKDNFDLALDGTFEWKQ
LQQEDS
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacttcagagaaacctgagtgtattccagcaaactaaaattctcttgtggaaa
aatgtacttatcaaatggaggatgaaaatgcagagctttcaggagtggatgctgtctctg
ctcttcctgccgttgatgttcattgtgggcaacttcatgctgcacatcccctaccccgag
gtgccacacagctacctcgggcagctagatgaccctgcctatgatgctgctggcgtcacc
atcgcctttacacctatcaccccaaccacaaggcaaataatgaatgcagtggccttgaag
tctgtaatgacaggtataaaactagaggcaatggacagtgagagagccctggaggaagcc
tggattttgaataatgaaattataggggttgtatttaaaaacaatttctcctattacctc
cggtttcctactgggaatgtggctattccaaatgacaaccttggatacgtagatacctgt
tataatttctcagcacgatactgtgacagccccaagtattggtacaaaggcttcctgtcc
ctgcagtccagcatcgatgctgctatcatagaggtggtggcaaatcattctgtttgggaa
gaaatgaagtcaattgccggtgtccgtatgaagtcccggagtgtcatctactcgattaca
ttagagtacagttatttcatgattactattgtgatgtgtttctcttcattcatgtacttc
ttatcaatgaatgttgtaagggaaaggaaaaagctcaaagtactcatgaagacgatgggg
ctgcaagacattgcattttggctctcctggagcctgctgtatgccgtttacgtgctggtc
ctgtcctgcctgctgacagccctcgtggtgcaggaggctttctacgtcagcagcttcccc
gccgtcctgctactgtttttcctctatggcctcgcatgtatccacatggttttcatgctc
tgctccctcttacggacatccaaactcgctggctccatggggttcctcatcacctttctc
tttggctgcctgagcctcgcagtgctgatagaaaatcttccagaacctttgaagtggttt
ctcggtctcttttgtccatttgcatttaatgctggcattgccaaggttttccatttggaa
aaatatggaataggtttctctttttctaaccttatggaggaatcatactttttattttca
acttacattatgctgatcttcgactcagtcttgtacatgttgttagccatgtacttcgac
aaagttctgccgggcaaatacggcatcccagacccgccttttttctgcctgaagccctcg
tactggatgcggagcaggaggggctgccccggggagggaccctacagcgcagggagcccc
gaggagcccccaggagatgaagtggagccggtgcccaccgcgttcgtggggaaggaggcc
atcagactcaacaatattaaaaaagcatacaaaaagaaagacaagaaaacagaagcccta
agaggtttgtctttaaacatttacgaggggcagatcactgccttactcggtcacagcggg
gctggaaagacaacgctgctaaatgtgctcagcggactgactctgccttctgaaggctcg
gcaaccatctatgactacaagctctctgaaataggagacagggaagagatcaaagagatg
atcggcatttgcccacaattcaacgtacagttcgaagtcctgacggtgaaagaaaacttg
cgaacttttgcagagatcaagggcatcaagtccaaagaggtagaacgagaggtgcaaacc
attttggagctgctggatatcagtaacgttcaggacactcaagctgagaaactcagtggt
gggcaaaaacggaagttatccattgggatagccatgcttgggagcccccaggtgctgctg
ctggacgagccgacggctgggctggatcctctttcccggcaccaggtgtggagcctgctg
aaggagcacagagccgggcgggtgatcctgttcagcacccagttcatggacgaggccgac
atcctcgccgaccgcaaggcttttatctcacatgggaggctgaagtgtgtcggctcttcc
ctgttcttgaagaaaaaatgggggatcggctatcatttaaggatccatgtcagtgagtcc
tgtaacacagagagcgtgacatctctggttaagcagcacatccccaatgtcatattctcg
ggacatggtcaatatgagctgagatataaactgccgttagaaaacgtgaataaattccca
gatctgttccgtggcctcgacagctgttccgaccggggaattatcaattacggagttagc
atgacaaccctggaggatgttttcatgaggctggaagaagacgacacattgggacaagaa
gatgagcacgtccctggggaggagtgggcagaagcaggaccgcggtgccccgacgagaca
gagccgggctccctgctgctctcaggcaccggcaaggcgacggtgagcggcgcggtgctc
tggaggcagcaggtctctgccatggcctgggtgcacttcctaaagctcaagggttcggtg
aaaaacctccggtccattttgctgctctatgtggtttttctgcttcctctggttttgcaa
ctggccctggttgctgcctggcagagcatgagcgcctgggagctctcctcggcgcggtac
ttcatgcccctggggaagagggctccggcggagaccaccagcctgttggtccacaacagc
acgggctcaggcattgaagactttatccacactctcgagagccaagatctctcagtagaa
atcacaagccaggaaaatatcacagaggagctgaaacacaatggggctataaaagtgtct
cgtgaaggccagagctacaggttcaccatcttgtgccacatggaggccgtcaactgcttc
ccagtgcttgtgaacatcatcagcaatgctctgctgagagctctcaattccaccgcgcac
attaggatctggagtcacccttttttctctatagataatccacgattctgggattacttt
gtttctttctacctcatttacatgctgttgctgttccctggttttcctcctcactttgcg
atgggctacttgcaggattacaagacaggagctcgcgcccagctacgggtctcggggctc
ttcccctcggcatactggtgtggccaggcgctggtggatgtcccgctctgctggctcctt
ctcttctccatgttcgggcttcagttcgccatgagcaacaggatttccgggagcatcggc
aacatcttcttgctggtcatgggtgctttgggctacggagtttccattgttctcttcatc
tatttaatctccttcctctttcgcaaaggatggaactgtgatttttggtcttttatcctg
atagtggtatgcctcgtgtctttcattatcagccgagtcatggattacacacttgatatg
agtgtctccctctacctcatgtctctcttgattcccctgtacccactgctgggcgttatg
atcaacagcgagcagatttttgtagaggacgctgacttaatcgctgctagtccaaggaac
gacgtgctaatagctgtctttgcaccttatatccattctgtgggtttcatttttcttctt
cgatatttggagataaaatatggaagaacagttctgagaaaggacccagtatttagaatt
tccccgagaaatgagagcagccaccagcatcttgaggagcaagaagaggaggatgaagat
gttaaagctgaaagagcagcagtgagaaatgccatggtagctcctagtcaggaggagaaa
tcagttattattgtcagcaatctgtgcaaggaatataaaacaaagaaagcaggttcagtt
tttaagaagaagaagaaaatggccaccaaaaatatctccttttgtgttaataaaggggaa
gtattaggacttttggggccaaacggagctggtaaaagcacagctatcaagatgattgct
ggagagacgacaccgactgctgggcaggtgctgctgcggaggcgagaaggagcgacgtgc
tgcctgcaggaccacctggggcactgcccgcaggaggacccgctctggccggacctcacc
gtgcaccagcacctccaggtctacgcggccgtgaaaggagtgcgcaaggaggatacggct
gctgctgtcaaccgaatagtgaatgctctggagcttcaagactatttaaaaaaatcagcc
agaaaattatctgccgggattaccagaaagctgtgcttcgccatgtgtgcgctgggcaac
cccacggtgctgctcctggacgagccatcgaccggcatggaccccaaggggcagcgctgc
gtctggaaaacgatccgtgctgccctgaaaaccaaggagacaggggccgttctgaccacg
cactacatggaggaggcggaggcagtgtgcgaccgcgtggccatcctggtggctggacag
ctacggtgcattggctccattcagtacctgaagagcaagtttggcaaaggctacctgctg
gaaattaaaatcaaggacccagagagcacggatctcctccacgctgagattttgaggatt
ttcccgagtgcagcccgtcaggagcggttcccctctttgctcgtctacaaggtcccaatg
gaagacgcactgcccctgtcccagtctttctccaagctagaggaagccaagcagaacttc
agccttgaggagtacagcttctctttgaacactttggctcaggtgtttttggaactctcc
cgagagcaagagaaggataattttgatctagctttggacgggacctttgaatggaaacag
ctgcagcaggaggacagttag
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