Cygnus atratus (black swan): 118254084
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Entry
118254084 CDS
T09349
Symbol
MMP28
Name
(RefSeq) matrix metalloproteinase-28
KO
K08006
matrix metalloproteinase-28 (epilysin) [EC:3.4.24.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118254084 (MMP28)
Peptidases and inhibitors [BR:
cata01002
]
Metallo peptidases
Family M10
118254084 (MMP28)
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
DUF4953
Reprolysin_4
Reprolysin_5
Reprolysin_3
Peptidase_M57
Peptidase_M66
Metallopep
Reprolysin_2
Peptidase_M54
Astacin
Motif
Other DBs
NCBI-GeneID:
118254084
NCBI-ProteinID:
XP_035414957
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Position
20:5238075..5250460
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AA seq
499 aa
AA seq
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MAAVLRAALALGLLAAVRAAAGGSRRRQAEQFLQKYGYLGAAHPSPHSPVEFTAALRDFQ
RVSHLLPSGVLDAPTLRQMGRPRCGTGDGESWGHLAAPRHRRSAQHGSKWHKRHLTYRVV
NWPPYLPQHEVRLAVRAAFELWSNVSSLVFWEARDGPADIRLTFFHGDHNDGLSNAFDGP
GGALAHAFFPRRGEAHFDSAERWSLRSGKGRNLFVVVAHEVGHTLGLEHSPARSALMSPY
YKKLSKDFVLSWDDILAIQNLYGKPSRGSAIQLPGRVFTHFQDWSGDLYGGDRQRQGAST
YYCHSFFDAVTADADHSLYIFKGGHFWVVSASGNASQPQPLHARWPGLPAGIDACACSPL
SRSFYFFKGGRCWRYQGSTLASGFPQKCSARGLPRHPDTALYFQRLRRLVLFKGAKYFVA
SEETLAVEPYYPRSLRDWDGVPPGTTGALTHRDGSVYFFRDEQYWRFDQAKLRVVATGKW
ATQLPWMGCWDANGGQVLF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgctgagggcagcgctggcgctggggctgctggcggccgtgagggcggcg
gcgggcggcagccggcggcggcaggcggagcaattcctgcagaagtacggctacctggga
gcagcacaccccagcccgcacagccccgtggagttcacggcggcgctgagggacttccag
cgggtgagccacctcctgcccagcggggtcctggacgcccccacgctgcggcagatgggc
cgcccgcggtgcggcacgggcgatggggagagctggggccaccttgccgcaccgcgccac
cggcgctcggcgcagcatggcagcaagtggcacaagcggcacctgacgtaccgggtggtg
aactggccgccgtacctgccgcagcacgaggtgcgcctggccgtcagggccgccttcgag
ctctggagcaacgtctcctcgctggtcttttgggaagcgcgggacggcccggccgacatc
cgcctcaccttcttccacggggaccacaacgacgggctcagcaacgccttcgatgggcca
ggaggtgccctggcccacgccttcttcccccgccgcggagaagcccacttcgacagtgct
gagcgctggtccctgcgcagcggcaaggggcgcaacctcttcgtggtggtggcgcacgag
gtcggccacacgctggggctggagcactcccccgcccggagcgccctcatgtccccctac
tacaagaagctcagcaaggacttcgtcctcagctgggatgacatcttggccatccagaac
ttgtacgggaagccctccaggggctcggccatccagctgccgggaagggtcttcactcac
ttccaggactggagcggggacctgtacggcggggaccggcagcggcagggcgccagcacc
tattactgccactccttcttcgacgccgtgaccgccgacgcggaccacagcctgtacatc
ttcaagggcggccacttctgggtggtgtcggccagcggcaatgccagccagccccagccg
ctgcacgcgcgctggcccggcctccccgccggcatcgacgcctgcgcctgctccccgctc
agccgcagcttctacttcttcaaaggcggccgatgctggcgctaccaaggctccaccctg
gcgtcaggcttcccgcagaagtgcagcgcccgcggcctcccgcggcaccccgacacggcc
ctctacttccagcggctccggcgcctggtgctcttcaagggcgccaagtacttcgtggcg
agcgaggagacccttgccgtggagccctactacccccgcagcctgcgggactgggacggc
gtcccccccggcacgacgggggccctgacgcaccgcgacggctccgtctacttctttcgg
gatgagcagtactggcggttcgaccaggccaagctgcgggtggtggccacaggcaagtgg
gccacgcagctgccgtggatgggctgctgggacgccaacggcgggcaggtcctcttctga
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