Cygnus atratus (black swan): 118254116
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Entry
118254116 CDS
T09349
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03030
DNA replication
cata03410
Base excision repair
cata03420
Nucleotide excision repair
cata03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118254116 (RFC2)
03410 Base excision repair
118254116 (RFC2)
03420 Nucleotide excision repair
118254116 (RFC2)
03430 Mismatch repair
118254116 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cata03032
]
118254116 (RFC2)
03036 Chromosome and associated proteins [BR:
cata03036
]
118254116 (RFC2)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118254116 (RFC2)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118254116 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
118254116 (RFC2)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118254116 (RFC2)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118254116 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
118254116 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
AAA_24
Mg_chelatase
AAA_11
Rad17
AAA_assoc_2
DNAX_ATPase_lid
MipZ
AAA_19
nSTAND3
RuvB_N
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_30
AAA_25
AAA_23
NTPase_1
MeaB
RNA_helicase
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
118254116
NCBI-ProteinID:
XP_035415004
LinkDB
All DBs
Position
20:3462063..3477315
Genome browser
AA seq
352 aa
AA seq
DB search
MEAEETEKAGAQGEKLGPADAPGPAPAASGHYELPWVEKYRPVKLCEIVGNEDTVSRLEV
FAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFTAQGDMRQALNNLQSTYSG
FGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGNIFRV
CKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagaggagaccgagaaggccggggcccagggcgagaagctagggcccgccgac
gccccggggcccgctcccgccgccagcggccattacgagctgccgtgggtggaaaaatac
agaccggtgaaactatgtgaaatagttggaaatgaagatacggtgagcaggttggaggtc
tttgcaaaagaggggaatgtaccaaatattatcattgctggtcccccaggaacaggtaaa
accaccagtatcctctgcttggctcgtgctctgcttggtcctgcattaaaggatgctgtt
ttggagctgaatgcctcaaatgacagaggcattgacgttgtgagaaacaaaatcaaaatg
tttgcccagcaaaaggtcacacttccaaaaggtcggcataaaataatcatccttgatgaa
gcagacagcatgacagatggagcacagcaagcgttgagaagaacaatggaaatttattcc
aaaacaacacgcttcgcacttgcatgcaatgcctctgacaaaatcatagagcctattcaa
tctcggtgtgcggtgctgcgttacaccaagctgacggattcacaaatccttgcaaggcta
ctgaaaattgttgagaaagaggatgtaccatatacagatgatggattggaagccattatc
ttcacagcccaaggagatatgagacaggcattaaacaacttgcagtccacatattctgga
tttggctttataaacagtgaaaatgtctttaaggtatgtgacgagcctcatcctctgctt
gtgaaagaaatgatacaacactgcataaatgcaaatattgatgaagcatacaagattctt
gctcacctttggagacttggatactctccagaagatgtgattggtaacatcttccgtgtg
tgcaaaacctttcaaatgcccgaatatctgaaactggaatttatcaaggaaattggctac
acacatatgaaaatagcagaaggagtgaactcgcttttacaaatggctggactgttggcc
aggctgtgtcagaagactgcagcccctgcagcaagttag
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