Cygnus atratus (black swan): 118254164
Help
Entry
118254164 CDS
T09349
Symbol
NSUN5
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cata03009
]
118254164 (NSUN5)
Enzymes [BR:
cata01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
118254164 (NSUN5)
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
Other ribosome biogenesis factors
118254164 (NSUN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
118254164
NCBI-ProteinID:
XP_035415083
LinkDB
All DBs
Position
20:432736..436029
Genome browser
AA seq
466 aa
AA seq
DB search
MSLYGAAAAVLSALERGEGGLSGLVYGSRFPHARQLYALVAETLRYSPVLEAVLDGAALL
RAERRLPLPLAKVLVYDLLFGKGLKCGGRWKALLRRHRARLEAELARLKVRRGVSRNEEL
LAAAPGAGPGAPRVPRYVRVNTLKARVDDVVDFFKRQGYSFLGKAGSMEELRTLSGKKFL
LDLHLPELLVFPPQTDFHDNRLYTSGHIILQDKASCLPAFLLSPVASSYVIDACAAPGNK
TSHLAAILKNKGQIFAFDMDAKRLATMNTMLMRAGVTSFKLAQQDFLTVDPQDPKYSKVT
YILLDPSCSGSGMVNRLPVEEAAPSAERLQALAGFQRKVLSHALSFPAVQRLAYSTCSVH
REENEDVVQAVLQEQGSAFRLVNVFPSWPCRGLATFPGAECCLRASPAATLTQGFFVAVL
ERCRDQTAVPSSLPAAAEESLQQGEEAEPGAAPPKKRRRKKQRVKT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtacggcgcggccgccgccgtgctgagcgcgctggagcgcggcgagggcggc
ctgagcgggctggtgtacggcagccgcttcccgcacgcccggcagctgtacgcgctggtg
gccgagaccctgcgctactccccggtgctggaggcggtgctggacggcgccgcgctgctg
cgggccgagaggaggctgccgctgccgctggccaaggtgctggtgtacgacctgctcttc
ggcaagggcctcaagtgcgggggccgctggaaggcgctgctccggcggcaccgggcgcgg
ctagaggccgagctggcccggctgaaggtgcggcgcggggtgagccgcaacgaggagctg
ctggcggccgccccgggagccggccccggagccccgcgggtcccccgctacgtccgggtc
aacaccctgaaggcgcgcgtggacgacgtggtggacttcttcaagcgccagggctactcc
ttcctgggcaaggcaggcagcatggaggagctgaggaccctgtctgggaagaaattctta
ctggatcttcatctcccagagctgctggtcttccctccacagactgacttccatgacaac
cgtctctatacgtcaggacacatcattctgcaggacaaggccagctgcctccctgccttc
ctgctcagccccgttgccagctcctacgtgattgatgcctgtgctgcccctgggaacaag
accagccacctggctgccatcctgaagaacaagggacagatttttgcctttgatatggac
gccaaacgcctggccaccatgaacaccatgctgatgcgagccggtgtcaccagcttcaag
ctggcccagcaggacttcctgacggttgatccccaggaccctaagtacagcaaagtgacc
tatatcctgctggacccgtcatgcagtggctcagggatggtgaaccggctgccagtggag
gaagctgccccaagtgcagagcggctgcaggcactggctggcttccagcgcaaagtctta
agccatgcactgagcttcccggcggtccagcgcctggcctactccacctgctcagtgcac
cgggaagagaatgaggatgtggtgcaggcagtgctccaggaacagggctcggccttcagg
ctagtgaacgtgttcccatcctggccctgccgaggacttgctaccttccctggggccgag
tgctgcctccgtgcctctcctgcagccacactcactcagggcttctttgtggctgtcctg
gagcgctgcagggaccagactgctgtccccagctccttgcctgcagcagctgaggaaagt
ctgcagcaaggcgaggaagcagagccaggagcagctcctcccaagaagaggagaaggaaa
aagcagcgggtaaagacatga
DBGET
integrated database retrieval system
