Cygnus atratus (black swan): 118254178
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Entry
118254178 CDS
T09349
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118254178 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118254178 (RNF43)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118254178 (RNF43)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118254178 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
KIAA1549
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
118254178
NCBI-ProteinID:
XP_035415103
LinkDB
All DBs
Position
20:complement(709720..768143)
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AA seq
833 aa
AA seq
DB search
MSGGPQLQLAVLWPWLLMATLQVGLGHTGLALAAAVESERSAAQKAIIRVIPLKVEPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSLQQQTMQAIGQLATR
NYQARCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSVDQAPVAGSRLAPRDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRS
FPPEPAHGNPFFHSPELSQLDFSTIHYMPYRTASSLPTCGHPSPLVPGLRGQQHPSPTAC
GQPLTPHRTCPLQPQPPCLGLKAALAQRQHRAPALRRGASHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
TTDNGQERQRPPRETRPRSLDLVVPGGAAPSKAQVLSHVHYHHHQHHHYRRDTECPPGRA
GQGPGQRKSRYSGTKVSFHGARMQKRAEKSHHCQQPVESSTVLQEAPPAGQTACSQQGRE
PPHAPSASLNRLNFTVDATRQPGAAGTSPVLLPQRHSLQSRHHRRKRKCPLEPDPSLLPE
DSALPKACDTHIPHGHPTGHRCSPEVQPLIPSAPLPCSLGSRPLWKCLVPQSSSELKKQE
EGMSGREGNHTVPAGFSGMGTAKHSLSLRLHCPTQQCSQGSEEEVQDVHEHSV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggcccccagctgcagctggctgtcctctggccttggctgctcatggctacc
ctgcaggtaggacttggccatacagggctggcactggcagcggcagtcgagtctgagagg
tcggcagcacagaaggcgatcattagggtgatccccctgaaagtggagccgatcatcctg
gagggagagttcgcaaatgtcgctgaggttactccagccgaaggaaaactgcttcagtcc
cacccgctgtccctgtgcaacaccagtgaggatgagcacacggagtcgggattcatcacc
attgtcaagcttgagcagccagatcgggatcccaacccgtgcctgtcgctggctaacaag
gcaaagctggcaggggaacgtggagcccgtgctatcctttttgacattactgatgatgaa
agcgctgctgatcagctgagaaagcccagagggctgagtcagcctgtggttctgatcagg
ggccatgatgctgagctgctcatgggtgtcgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggccagactacgatgtatggattcttctcacggtg
gtcagcactgttgttgtcatcattttgatctttgttgtccgcacaaagtgccagctgaac
aggactcaggactccttgcagcagcagaccatgcaggccatcgggcagctggccacacgc
aactaccaggccaggtgccggcaggcgtcacggtgggactccgccagcagctgcagctca
gccccagtctgtgctatttgcctggaggagttcagcgagggccaggaactgcggatcatc
tcctgctcccatgagtttcaccgggagtgtgttgacccctggctgcagcaacaccacaca
tgtccactttgcatgttcaatattcttgcccgagactcagttgaccaggccccagtagca
ggctccaggttggcccctcgggacatggagcctggacggagactgcaccttttccgccag
cacccaggacatgccctttaccacctcccacatgcctaccctcagagaaacctcaggagc
ttccccccagagccagcccatggcaaccctttcttccactctccagagctctcccagctg
gatttcagcaccatccactacatgccctacaggacagccagctctctgcccacctgtggc
cacccgtcccccctggtccccggcttgcggggccagcagcatccgagccccacagcatgt
gggcagcctctgacaccccataggacgtgccccctgcagccccagcccccctgcctggga
ctcaaggcagccctggcacagcggcagcaccgggcacctgccctgcgccgaggggccagc
catggacaccagcacaacagcagcggctccggggagagctatctcacggagcacagtggg
tacctggcagacgggccgggcagtgactccagctcggggccctgccacggttcctccagc
gactccatgttgaactgcacagacgtcagtctgcagggcatccacggcagctgctccact
ttccgcagctccctcagcagcgactacgacccgttcgtgtactgcagctcagaggggccc
accacagacaatgggcaggagcggcagcggccgccaagggagacgcggcccaggtccttg
gacctggtggtgcctgggggtgctgctccatccaaggcccaggtgctcagccatgtccac
taccaccaccaccagcaccaccactacagaagggacacagagtgcccgcctgggcgggcc
ggccaggggcctgggcagcgcaagtcccggtactctgggaccaaggttagcttccacggt
gctcggatgcaaaagagggctgagaagagccatcactgtcagcagcctgtggaaagcagc
actgtgttacaggaggcacctccagcaggacagacagcctgttcccagcaaggccgggag
cccccacatgccccctctgcttctctaaacaggttgaacttcactgtagatgccaccaga
caaccaggagcagctggcacatcccctgtcctgctgccgcagagacacagcttacagagt
cgtcaccacagaaggaaaagaaaatgtcccctggagcccgacccctctctcctgcctgag
gactcagccttgcccaaagcctgtgacactcacattcctcacggccaccccactggccac
cgctgctcccctgaagtccagcccctgatcccaagcgctcccttgccctgcagcttgggc
tctcggccactttggaagtgtttagtgccacagtccagctcagagctgaaaaagcaggaa
gaggggatgtcaggacgggagggaaaccacacagttcctgctggtttctcagggatgggc
acagcaaagcacagtctgagtcttcgcctgcactgcccaacgcagcagtgtagccaggga
tctgaagaggaggtccaggatgtccatgaacactcagtttaa
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