Cygnus atratus (black swan): 118254198
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Entry
118254198 CDS
T09349
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03020
RNA polymerase
cata03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118254198 (POLR2J)
09124 Replication and repair
03420 Nucleotide excision repair
118254198 (POLR2J)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118254198 (POLR2J)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118254198 (POLR2J)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118254198 (POLR2J)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118254198 (POLR2J)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
118254198
NCBI-ProteinID:
XP_035415160
LinkDB
All DBs
Position
20:complement(4996059..4997859)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcctccggccttcgagtccttcctcctcttcgagggcgagaagaagatcacc
atcaacaaggacacgaaggtgcccaacgcctgcctcttcaccatcaacaaggaggaccac
acactggggaacatcatcaaatcgcagttactgaaagaccctcaggtgttatttgcaggg
tacaaggtcccacacccgctggaacacaaaatcatcatccgcgtccaaaccactcctgat
tacagcccccaggaagctttcaccaatgccatcacggatctgatcagtgagctgtccctc
ctggaagagagattcagggttgccatcaaagacaaacaggaaggaattgagtga
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