Cygnus atratus (black swan): 118254366
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Entry
118254366 CDS
T09349
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cata03400
]
118254366 (PARPBP)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118254366 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
118254366 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
118254366
NCBI-ProteinID:
XP_035415454
LinkDB
All DBs
Position
1:complement(59400383..59454667)
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AA seq
619 aa
AA seq
DB search
MVDFQQKILNLIKCFRRQWHLFSNSERTTVCGADCMLMVLQLSMAEVNKQHHGDFMVSLN
HVMETWKYLLHDKLGLSHENMEEPENYADVKKAYDTFLASSNMLDIIDVCQKCYALALLS
EEESIAPVQLLEFISGIMNVPENSGCVPSTPAPVNRQDQSNAKVMFMAKKCVYSYLSLVV
NSKDDLALAHILNVPDRGLGREAFTKLKHASQERKMSIFLMATSFIRTVELGGKGCAASL
FDPLRVHVKGLSNFVNFIDKLEEILGEILDPRIAGGRILSTVKMHLIKGRSNGDPFCQSV
EEVVQDLDLKIKNIIDSQHEVLTASTTGVSPTRGQKIDDCILMPGNMEILNSIKNRMKLM
FSQNGQLWAAYELYVNPKLHSINHGTVYCGRDTVKVLLVLLDEEAVSAPTENKELLLCDD
ENLNMFGITSVLTLFRSPAQSDGSSPKPLRQRIQKSMDEKIIKMKQSSIKSQFACTYKNE
LSEIEGHGFFSSSQMSTCEHPAPKQHLQEGMNSCLDIPVLGTISENVHQNRNYTEMGKLS
CRPRKKNFRNEQMDLNNDKVICDEESELSLPKNAKKRKTSNHPQKKLDSKIDGKRKNNKT
ASKNKLIAGQAKLTQFFRL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggttgatttccagcaaaagattttaaacttgatcaaatgtttcagaagacaatggcac
ttattttcaaactcagaaagaactactgtatgtggagcagattgcatgctgatggtgtta
caactgtcaatggctgaagtcaataaacagcaccacggagatttcatggtatcacttaat
catgtgatggaaacttggaaatatttgttacacgacaaactaggattatcacatgaaaac
atggaagaaccagaaaactatgctgacgttaaaaaagcctatgataccttcttagcaagc
agcaatatgttagatatcatagatgtatgtcagaagtgctatgctcttgcacttctatct
gaagaggaaagcatagcccctgttcaactgctggaatttatttctggcataatgaatgta
ccagaaaatagtggttgtgtgccttctactcctgcaccggtcaacagacaggaccagagc
aatgcaaaggtgatgttcatggcaaagaagtgtgtttattcatatttaagcctggtggtg
aattctaaggatgatctggcattggctcatattctaaatgttcctgacagaggacttggt
agagaagcctttactaaactaaaacatgcctcacaggagagaaaaatgtccattttcctg
atggcaacatcttttatccgaactgtagaacttggaggaaaaggctgtgcagcttcatta
tttgatcccttaagagtccatgtaaagggactttcaaactttgttaactttattgacaag
ctggaagaaattcttggtgaaatcttggatccaagaatcgcaggggggcgaattctgtca
acagtgaagatgcatttgataaaaggccgaagcaatggggatcctttctgtcagtcagta
gaggaagttgtacaagatttggatttgaagattaaaaatattatcgattcacaacatgaa
gtcttgactgccagcaccactggagttagtccaacacgggggcagaagatagatgattgt
atcctgatgccaggaaatatggaaatacttaattccattaagaacagaatgaagctaatg
ttttctcaaaatgggcaactgtgggcagcttatgaactttatgttaatccaaagctgcat
tccataaaccatggtactgtgtattgtggcagagatactgtgaaagtcttactagttctt
ctggatgaagaagcagtcagtgctcctactgagaacaaagaattattattatgtgatgat
gaaaacttaaatatgtttggaatcacctctgttctgacactcttcagatctccagcacag
tccgatggatcttccccaaaacctcttagacagcgtattcagaaatctatggatgaaaaa
ataattaagatgaagcaatcttcgatcaaatctcagtttgcatgtacatataaaaatgaa
ttgagtgagatagagggtcatggtttcttcagcagtagccaaatgtcaacctgtgaacat
cctgcaccaaagcaacatttacaagaaggtatgaattcatgtcttgacataccagtgctt
ggaactatttctgaaaatgttcatcagaatagaaattatacagaaatgggaaaactgagt
tgtcggccaagaaaaaagaacttcaggaatgaacagatggatttgaataatgacaaagtt
atctgtgatgaggaaagtgaattatctttgccaaaaaatgctaagaaacgtaagacttca
aaccaccctcagaagaaattggacagcaaaattgatggaaaaagaaagaacaacaaaact
gcaagcaagaataaattgattgctggtcaggcaaaattaactcaattttttcgactgtaa
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