Cygnus atratus (black swan): 118254388
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Entry
118254388 CDS
T09349
Symbol
PDLIM7
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 7
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118254388 (PDLIM7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118254388 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118254388 (PDLIM7)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
118254388
NCBI-ProteinID:
XP_035415479
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Position
14:9377848..9395185
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AA seq
813 aa
AA seq
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MGDMESYKVMLNGPAPWGFRLQGGKDFSMPLSISRLTPGGKAAQAGVGVGDWVLYIDGES
TSAMTHIEAQNRIRACGDRLCLTLSRAQNHLGKPQKVQSLDKQPPQHPTTPIYDPSKLHL
IEDSEDWQPRNTNTQSRSFLKLAQLTGTDSLEDHDEELVRKPRGPRVSFWGTEEEWXPLH
SPGTPTRDPGKLRLIEDAEDWQPRTGTSQSRSFRKLARLTGTDGLEDHDEELVRKPRDSR
GSFYGTVEQRQPLQPVEPPETPACDPGKLRLIEDAVDWQPRTGTSQSRSFRKLARLTGTD
GRKFLRALMEDHNEELVRKPRDSHGSFYGTEEQWQPVEPEEPPETPACDPGKLRLFEDAV
DWQPRTGTSQSRSFRKLARLTGTDGHDDVFVRKPRDSRGSFCGTVEQRQPLQPVEPPETP
ACDPGKLRLIEDAEDWQPRTGTSQSRSFRKLARLTGTDDLEDHDEELVRKPRGPRVSFCG
TEEQRQPMEPEEPPETPACDPGKLRLFEDAVDWQPRTGTSQSRSFRKLARLTGTDGLEDD
DVFVRKPSQVSVLDPSPGAAMKTEPGLAPRTPAATPGPASRPPWAVDPSFAERYAPDKTS
TVLSKHSQPATPTPMQNRSSIVQAAQQAPEGLGRTPLCYKCNKVIRGRYLVALGHYYHPE
EFTCCQCRKVLDEGGFFEEKGSIFCPKCYDTRYAPSCAKCKKKITGEVMHALKMTWHVQC
FTCAACKTPIRNRAFYMEEGQPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGFSWHDT
CFVCAICQTNLEGKTFYSKKDKPLCKSHAFSHV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatggagtcctacaaggtgatgctcaacgggccggcgccctgggggttcagg
ctgcagggagggaaggatttcagcatgccgctctccatctctaggctgactccgggcggg
aaggcggcccaggctggcgtgggagtaggcgactgggtgctgtacatcgacggggagagc
accagcgccatgacgcatatcgaggcccagaacaggatccgtgcctgcggggacaggctc
tgcctcacgctgagcagagcccagaaccacctggggaagccgcagaaggtgcagagcctt
gacaagcagccgccgcagcaccccactacccctatatatgaccccagcaagttgcatctg
atcgaggactctgaggactggcagccccgcaacaccaacacccagtcccgctccttcctc
aaactggcccagctgacgggcacagacagcctggaggatcacgatgaggagcttgttagg
aagcccaggggtcctcgtgtgtcattctggggtaccgaggaggagtggtgacccctgcac
tcccctgggacccccacgcgtgacccgggcaagctgcggctgatcgaggatgctgaggac
tggcagccccgcaccggcacctcccagtcccgctccttccgcaaactggcccggctgacg
ggcacagacggcctggaggatcacgatgaggagcttgttaggaagcccagggattcccgc
gggtcattctatggcacagtggagcagcggcagcccctgcagcccgtggagccccccgag
acacccgcgtgtgacccgggcaagttgcggctgatcgaggacgctgtggactggcagccc
cgcaccggcacctcccagtcccgctccttccgcaaactggcccggctgacgggcacagac
ggccgtaagttcctgcgggccctgatggaggatcacaatgaggagcttgttaggaagccc
agggattcccatgggtcgttctatggcacagaagagcagtggcagcccgtggagcctgag
gagccccccgagacccctgcttgtgacccgggcaagttgcggctgttcgaggacgctgtg
gactggcagccccgcaccggcacctcccagtcccgctccttccgcaaactggcccggctg
acgggcacagacggccatgatgatgtgtttgttaggaagcccagggattcccgtgggtcc
ttctgtggcacagtggagcagcggcagcccctgcagcccgtggagccccccgagacaccc
gcatgtgacccaggcaagttgaggctgatcgaggacgctgaggactggcagccccgcacc
ggcacctcccagtcccgctccttccgcaaactggcccggctgacgggcacagatgacctg
gaggatcacgatgaggagcttgttaggaagcccaggggaccccgcgtgtcgttctgtggc
acagaggagcagcggcagcccatggagcctgaggagccccctgagacccccgcgtgtgac
ccgggcaagttgcggctgttcgaggacgctgtggactggcagccccgcaccggcacctcc
cagtcccgctccttccgcaaactggcccggctgacgggcacagacggcctggaagatgat
gatgtgtttgttaggaagcccagccaggtctccgtgttggatccgtccccgggagcagcg
atgaaaacagagccgggactggcccccaggacccccgctgccacccctggccctgccagc
cgcccaccctgggctgtggacccgtcatttgccgagcgctacgccccggacaagacgagc
acggtgctgagcaagcacagccagccggccacgccgacccccatgcagaaccgcagctcc
atcgtgcaggcggcccagcaggcgcccgaaggcctcggccgcacaccgctctgctacaag
tgcaacaaggtcatcaggggacgctacctggtggcactgggacattactaccaccccgag
gagttcacctgctgccagtgcaggaaggtgctggatgagggtggtttcttcgaggagaag
ggctccatcttctgccccaagtgctacgacacgcgctacgcgcccagctgcgccaagtgc
aagaagaagatcaccggggaggtgatgcacgcgctgaagatgacctggcacgtgcagtgc
ttcacctgtgcagcctgcaaaactcccatccgcaaccgtgccttctacatggaggaggga
cagccctactgcgagagagactacgagaagatgtttggcaccaagtgccacggctgcgac
ttcaagatcgatgctggggaccggttcctggaggcgctggggttcagctggcacgacact
tgcttcgtctgtgcgatctgccagaccaacctggaagggaagacgttctactccaagaag
gacaagccgctgtgcaagagccacgctttctcccacgtgtga
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