Cygnus atratus (black swan): 118254421
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Entry
118254421 CDS
T09349
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118254421 (SOX30)
Transcription factors [BR:
cata03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118254421 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
118254421
NCBI-ProteinID:
XP_035415508
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Position
14:complement(8166085..8173012)
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AA seq
628 aa
AA seq
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MERGGGGGEPGLGPGPQGLGGDCGEPLPERPLSAERPRRGAEAPAEGGGESGSGTGSPAA
AGGAPGEALGGPRTDAGRGRGGGDGRRGSAEEPRGAPRARAGVGGSPHGSPHGPGAGITA
AQPRGEPPGVLPQALRVPLVLRPLPAAGRLQLQGPVPAELLRLPQVPLEQVPLKMQALLE
PSVKIETKNVPLTVLPSDSGMPDTPFSKDKSGHVKRPMNAFMVWARIHRPALAKANPTAN
NAEISVQLGLEWSKLSEEQKQPYYDEARKIKQRHREEFPGWVYQPRPGKRKRFPLNVSGL
LSGTTQTIITANPAAVLPFQSPGYSVVIPTVQNSIGHPVCEALSAIRLPASSVQRPGPMT
LFQSTFASTTSLAVPAPTLPLHPVIATQHFAESVQTEACDVSSGSTCSLKRLTPVFVESS
SRNPSNTVTAHGRFSVSTIELPKEYSGLSACPRGVPLSQATPLPHSHLYESPPIGQPVHL
FGAPPRFSFHHPYFVPGPYYFPSSTCPFSRPPFGCGNFSSSVPECLGFYENRYQKQEMKF
SVLDRDYPFREYPEEVVHEDSHNCESLEEVTCHSSHGEEECVSPIPQLDIGAIEKVLSAT
PPTPSSIQLINVTDSEEEEEEEKVLREL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggcgggggcggcggcgagcccgggcttggccccggcccccaggggctgggc
ggggactgcggggagccgctcccggagcgccccctcagcgccgagcggccccggcgggga
gccgaggcccctgctgagggcggcggggagtcggggagcgggacggggagccccgcggcc
gcggggggagccccgggggaggctctcggtggcccccggacggatgcagggcggggaagg
ggcggcggggatgggcggcggggcagcgcggaggagccgcggggagcccccagggcgagg
gcgggcgtggggggctccccgcacggctccccgcacggtcccggtgccggtatcacggcg
gcacagccccgcggggagcccccgggggtgttgccccaggcgctgagggtccccctggtg
ctgcggccgctgcccgccgccggccgcctgcagctgcagggcccggtgcccgccgagctg
ctccgcctgccccaagtgcccctggagcaagtgccgcttaaaatgcaggcgttgctcgag
ccgtcggtgaaaatcgagaccaaaaacgtgcccctcactgtgctgccctccgactcagga
atgccagatactccatttagcaaggacaaaagtggccacgtaaagcgtccaatgaatgca
tttatggtgtgggctaggattcatcggcctgctctagccaaagctaacccgactgccaat
aatgcagaaatcagtgttcagctcgggttggagtggagcaaactgagtgaagagcagaaa
cagccctattatgatgaagctcggaaaataaaacaaaggcacagagaggaatttcctggt
tgggtttatcagccacgaccaggcaaaaggaagcgttttccactgaatgtctctggtcta
ctttccggcaccactcagactatcatcactgcaaatccagctgccgttcttcccttccaa
tcacctgggtactctgttgtcatccccaccgttcagaacagtattggacatccagtctgt
gaagctctttctgccatccgtctgccagcttcttctgttcaacgtccaggtccaatgact
cttttccagtctacttttgcgagcaccacatcattggcagttccagctccaaccctgccc
ctgcaccctgtaattgcaacacagcactttgctgaatctgttcagacagaagcttgtgat
gtatcttctggatccacctgctctctgaagagacttacaccagtttttgttgagagctcc
agtagaaacccaagtaacacagtcactgctcatggcagattttccgtttctaccattgag
ctcccaaaggagtactcagggctttctgcttgtcctagaggagtacctctttcccaagct
actcctcttcctcactcacatctctatgagagtcctcccattgggcagccagttcatctg
tttggagcacctcctcgattttcatttcatcacccttactttgtacctggaccttactat
ttcccctcaagcacgtgcccattcagccggcctccatttggctgtgggaatttctccagc
tcagtgccagaatgtcttggcttttatgaaaacaggtaccagaagcaggagatgaagttt
tcggttctggacagagactatcctttcagggaatacccagaggaagtcgtacacgaggac
tcacacaactgtgagagccttgaggaagtgacctgtcacagcagccacggtgaggaggaa
tgtgtaagccccataccacaactggacattggagcaattgagaaagttttgtcagccacc
ccacctactccttccagcatccagctaatcaatgtgactgacagtgaggaggaggaagaa
gaagaaaaggtgttgcgagagctgtaa
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