Cygnus atratus (black swan): 118254511
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Entry
118254511 CDS
T09349
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118254511
Cell adhesion molecules [BR:
cata04515
]
Cadherins
Protocadherins
118254511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
118254511
NCBI-ProteinID:
XP_035415680
LinkDB
All DBs
Position
14:12076707..12081070
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AA seq
962 aa
AA seq
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MGAGAGCGRGQLFLPSLLLLLFLLAAPRSASGQLRYAVPEEQEHGAFVANLGEDLRLDVS
TLSARRFRIVARAGARQHLEVNLENGILFVNERIDREEVCEAGGTCLLHLQLLVESPLEL
YRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYQLSPNG
FFSLEVQTRSDASKFAELVLERTLDREQQRTHRVLLTALDGGIPRRSGTAHILITVLDAN
DNVPAFDQPSYRVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRVRELFRVE
PRSGQVLLKGPLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVS
TPVQEDAPTGTVIAVISVLDRDSGDNGRVSCEISPNVPFELRSSFRNYYTLVTTEALDRE
VVPEYNVSITARDMGSPALLTRSTLTIPVSDVNDNAPRFLQPSYSVYVMENNAPGASICS
VSALDPDCQQNAYLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQVQ
AQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSAGPGYLVGTVSAV
DADAGLNSRLSYQLLQATDFTLFSLAPDTGELRTLRSFLEQDAARQRLVVQVRDGGQPAL
SATMSLLLSVVETMPQTLSDFSNFSLPPEDSSSSPLTLYLLVSLGSISFTFLLAILILTA
IRCRGEQRSXRRDGCHCCPRPRSSPDSLKTSNLTAQPTTSTAAHLDVPDGGPPGYCYKLC
LGPESAQSDFMFLKPCSLPRNNEKGPGNLPAAGKRSQPGQQFHVSKQIKQPNTDWLPPSM
QRPALKSSQSLEDMGEIRRALQKEHERLCTLVTPVSEFQKASAGANSIWAPQHSPLYPGH
IPALDYQHNVYIPGTPTLLSSKDGPLFPGRENRNSFSTFGKRKKMTTYCDMPDSVVINND
LK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgggggccggggcaggctgcgggcgggggcagcttttcctcccctccctcctcctcctc
ctcttcctcctggccgcgccgcgctccgcgagcgggcagctgcgctacgccgtgcccgag
gagcaggagcacggcgccttcgtggccaacctcggcgaggacctgcggttggacgtgtcc
acgctgtcggcgcggcggttccgcatcgtggcccgggccggggccaggcagcacctggag
gtgaacctggagaacgggatcctcttcgtgaacgagcggatcgaccgggaggaggtgtgc
gaggcggggggcacctgcctgctccacctgcagctgctcgtcgagagcccgctggagctg
taccgtgtggaggtggaggtgctggacatcaatgaccacgcgcccacgttcccctggcaa
gagtacgtgttggaggtggccgagtctgccgtgcttggtgcccgcttcccgcttgagagc
gcccaggatcctgacgtgggtaccaactcggtgcacacctaccagctcagccccaatggc
ttcttctcacttgaggtgcagacacgcagcgacgccagcaagtttgcggagctggtgctg
gagcgcaccctggaccgcgagcagcaacgcacgcaccgggtgctgctcactgctctcgat
ggcggcatccccaggcgctcaggcacagcccacatcctcatcacagtgctggacgctaat
gacaatgtgcctgccttcgatcagccctcatacagagtgagcctgcctgaggatgcccct
gccggcaccctggtcatccagctgaatgccactgacctggatgagggtcccaacggggag
atcgagtactccttcagtgggcatgcaccaccgcgcgtccgggagctcttccgtgtggag
ccccgcagtgggcaggtgctgctgaagggccccctggactatgagcgggcaagccttcat
gagctctatgtgcaagccaaggaccgcggaccctcggctgtggctgtgcactgtcgggtg
cttgtgcacctccttgatgtgaatgacaacgcaccagaggtgaccctcacctctgtgtcc
acgcctgtgcaggaggatgccccaacaggcaccgtcatcgcggtcatcagtgttctggac
cgggactctggggacaatgggcgcgtgagctgcgagatcagccccaatgtgcctttcgag
ctccgctcctccttccgcaactactacactctggtgaccacagaggcgttggaccgggag
gtagtgcccgagtataatgtaagcatcacagcacgggacatgggctcccctgccctgctg
acccgcagcaccctcaccatcccagtgtccgatgtgaatgacaacgccccacgcttcctc
cagccctcctacagtgtgtacgtgatggagaacaatgcgccaggagcctccatctgctcc
gtcagtgctttggaccccgactgccaacagaacgcctatctgtcctactccatcgctgat
gggcacatccatggcatgccagtgggcacctatgtgtccatcaactcggacagtgggcac
atgtatgccctgcgctcccttgattatgagcaaatccgcagcttccagatccaggtgcaa
gcgcaggatgcaggcttccccccgctcagtgccaacgtcaccgttcacatctttgtgctg
gaccagaacgacaacgcccctgtcattgtgtcccccatgccacgcaatggctctgtggct
accgagctggtgccacggtcagctgggcctggctacttggtgggcacggtgtcagcagtg
gatgcagatgcagggctgaactcccgcctctcctaccagctcctccaagccaccgacttc
accctcttcagcctggcgccagacacgggcgagctgcgcaccctccgctcctttctggag
caggacgcagcccggcagcggctggtggtgcaagtgcgtgatggggggcagccggcgctc
tcagccaccatgtccctcctgctttctgtggtggagaccatgccacagactctctctgac
ttcagcaacttcagtctccccccagaggactcctcctcctccccactcacactctacctc
cttgtctccctgggctccatctccttcaccttcctcctggccatcctcatcctcacagcc
attcggtgccgcggagagcagcgctcctgacgacgtgatggctgccactgctgtcctagg
cccaggtcctcccctgatagcctcaagacatccaaccttacggcacagcccaccacgagc
acagccgcccaccttgatgtccccgatggtggccccccgggctactgctacaagctctgc
cttggtcccgagtctgcccagagcgacttcatgttcctcaaaccctgcagcctgccccgc
aacaacgagaaaggccccgggaacctgccggctgctgggaagcgatcccagcccggccag
caattccatgtctccaagcagatcaagcagcccaacacggactggctgccccccagcatg
cagcgacctgccctgaagagctcccagagcctggaggacatgggggaaatccgcagagca
ctgcagaaggagcacgagaggctgtgcacgttggtgacccctgtctctgagtttcagaag
gcctcagcaggtgccaacagcatctgggcaccccagcacagccccttgtacccggggcac
atcccggccctggattatcagcacaacgtctacatccctggcacccccactctgctttcc
agcaaagacgggccccttttcccaggccgggagaacagaaacagcttctccacctttggc
aagaggaagaagatgacaacttactgcgacatgcctgacagcgtggtcatcaacaacgac
ctgaagtag
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