Cygnus atratus (black swan): 118254534
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Entry
118254534 CDS
T09349
Symbol
RRH
Name
(RefSeq) visual pigment-like receptor peropsin
KO
K04253
visual pigment-like receptor peropsin
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cata04030
]
118254534 (RRH)
G protein-coupled receptors [BR:
cata04030
]
Rhodopsin family
Vision
Opsin
118254534 (RRH)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srt
FtsK_4TM
Motif
Other DBs
NCBI-GeneID:
118254534
NCBI-ProteinID:
XP_035415773
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Position
4:complement(4118315..4129184)
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AA seq
334 aa
AA seq
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MHWNDSSGSSQSDNEAHSAFTQTEHNIVAAYLITAGVISIFSNIVVLGIFVKYKELRTAT
NAIIINLAFTDIGVSGIGYPMSAASDLHGSWKFGYTGCQIYAALNIFFGMASIGLLTVVA
VDRYLTICRPDIGRRMTARTYAALILAAWINAVFWASMPTVGWAGYAPDPTGATCTVNWR
KNDASFVSYTMSVIAVNFVVPLTVMFYCYYNVSRTMKKYTSNNCLESVNTDWSDQVDVTK
MSVVMIVMFLVAWSPYSIVCLWSSFGDPKKISPAMAIIAPLFAKSSTFYNPCIYVIANKK
FRRAILAMVRCQTRQEITINNALPMSVSQSALTS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcattggaatgattcatccggttcctcacaaagtgacaatgaagctcattcagccttt
acacagactgagcacaacatagttgcagcttacttaataacagcaggagtgataagcatt
ttcagtaacattgttgtgctagggatctttgttaagtacaaagaacttcggacagcaacc
aatgcaattattatcaacttggcttttactgacattggtgtcagtggcattggctacccc
atgtcagctgcctcagaccttcatggaagctggaaatttggatatactggatgccagatc
tatgctgccttaaatatcttttttgggatggcgagtattggtttgctcactgttgttgca
gttgaccgttacctgacaatctgcaggcctgatattggaagaagaatgactgcccgtacc
tatgccgccctgatccttgctgcttggataaatgccgtcttttgggcttccatgcctacc
gtaggctgggctggctatgctccggatccaactggagcaacatgcacagtaaattggagg
aaaaatgatgcgtcctttgtttcctacacaatgagtgtaattgctgttaattttgttgta
cccttaacagtcatgttttactgttattacaatgtttcccggacaatgaaaaaatacacc
agcaataactgcctggagagcgtcaacacggattggtctgaccaagtagatgtaacaaag
atgtctgttgtgatgattgtaatgttcttggtggcatggtctccctattccattgtgtgt
ttatggtcttcctttggggacccaaagaaaatttctcctgcaatggccatcatagctcct
ctatttgcaaaatcttccacattctacaatccatgcatttatgtcattgcaaacaaaaag
tttcggagggcaatcctggcaatggtgcggtgtcaaacaagacaagagataactataaac
aatgccttgcccatgagcgtatcgcaaagtgcactgacatcgtaa
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