KEGG   Cygnus atratus (black swan): 118254536
Entry
118254536         CDS       T09349                                 
Symbol
LARP1
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1
  KO
K18757  la-related protein 1
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cata03019]
    118254536 (LARP1)
Messenger RNA biogenesis [BR:cata03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118254536 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 118254536
NCBI-ProteinID: XP_035415732
LinkDB
Position
14:7313023..7357973
AA seq 1073 aa
MATQVEALLPGAPLLPAEERALVLKPPQDGGREKGEQQQQQPQQQQPQQQQQQPMGPDGG
PAAPRPPSAKQQKEESNNQEKESLLRGAEPEEGGEAGGGGGVGVAGGRREFIEAPPPKVN
PWTKNAAALAVNGQSPPDIFPADGQSEHTTPAKVVRAANPRQRKGSKVGDFGDATNWPTP
GEIAHKSVQQPHKAPSLRKLPVKKDMKEQEKGDGSDGKESLKTKSDESGEEKNGDDDNQK
SAQKKKGNKHKWVPLQIDMKSEVPRDKTASRNNRQNEQHRHPSNNRGELKGWHPDNKHER
SWQDHDETSSVKSEGGAVRGAFRGRGRGRGRGRGRGRGAHFDYQYGYRKFEGSDGSRTQK
YASNITYYFDNISSTELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDSDGFLPI
TLIASFHRVQALTTDISLIIKALKDSKVVEIVDQKIRRKEQPEKWALPGPPMADYTQTDF
SQFINCPEFVPRQSFQKETESAPGSPRPASPVPTKTEEVSNLKTMPKGLSASLPDLDSET
WIEVKKRPRPSPARPKKPEESKTPQQQKQKDQDEPEELDFLFDEEMEQMDGRKNTFTDWS
DEDSDYEIDDRDVNKILIVTQTPPYLRRHPGGDRTGNHTSRAKMSSELAKVINDGLYYYE
QDLWTEQFEPEYSQIKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPT
DALANKLFGVPEPSTIARSLPTTVPESPNYRNARTPRTPRTPQLKDPTQTPRFYPVVKEG
RTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQ
SLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHF
NKKMYEEFKQLAVEDGKEGYRYGLECLFRYYSYGLEKKFRPDIFKDFQEETIKDYEAGQL
YGLEKFWAFLKYSKAKNLDINSKLQEYLSKFKRLEDFRVDPPMGEEGGHKRYPATSGGDG
RKRYPSQSSSKTVSQCPASQAHASPSQPAQEDAKNLSQQVPAPAAAELQTVGK
NT seq 3222 nt   +upstreamnt  +downstreamnt
atggcgacgcaggtggaggcgctgctgcccggcgccccgctgctgcccgccgaggagcgc
gccctggtgctgaagccgccgcaggacggcggccgggagaagggcgagcagcagcagcag
cagccccagcagcagcagccccagcagcagcagcagcagcccatgggccccgacggcggc
cccgcggctccgcggccgcccagcgccaagcagcagaaggaggagagcaacaaccaggag
aaggagagcctgctgcggggcgccgagcccgaggagggcggcgaggccggcggcggaggc
ggcgtgggcgttgcgggggggcgccgggagttcatcgaggcccccccgcccaaggtgaac
ccctggacgaagaacgccgccgcgctggcggtcaacgggcagtcgcctccagacatattt
ccagctgacggccagtctgagcacacgactcctgcgaaagtggtgagggctgccaacccc
aggcagcggaagggaagcaaggttggtgactttggtgatgctacgaattggcctacacct
ggagaaatagcccacaagagcgtccagcagccacacaaagctccttccctccggaaactg
cctgtcaagaaagacatgaaagaacaggagaaaggagatgggagcgatggcaaagagagc
ctgaaaaccaaatcggatgagtctggggaggagaagaatggtgacgatgacaaccagaag
tcagcccagaagaagaaaggcaacaaacacaagtgggtccctttgcagatagacatgaag
tcagaggtgcctcgggacaaaacggcctcgcggaacaaccggcagaacgagcagcacagg
cacccctccaacaaccgcggcgagctgaaaggctggcacccggacaacaagcacgagcgc
agctggcaggaccacgacgagacctccagcgtgaagagcgaggggggagccgtgcgagga
gccttccgcggccgaggcaggggccgtggcaggggccggggccgcggcagaggagcgcac
tttgactaccagtatgggtaccggaaatttgagggctcggacggctcccgcacccagaag
tacgctagcaacatcacttactacttcgacaacatcagcagcaccgagctctacagcgtg
gaccaggaactgctcaaggactacatcaagcgccaaatagaatattacttcagcgtggac
aacctggagcgagacttcttcctgcgtcgcaagatggactcggacggcttcctgcccatc
accctgattgccagcttccaccgggtgcaggcgctgaccactgacatcagcctcatcatc
aaggccctgaaggacagcaaggtggtggaaatcgtggaccagaagatcagaagaaaagag
cagccagaaaaatgggctctgcctggccctcccatggcagactacacacagacggacttc
tcgcagttcatcaactgccctgagtttgtgccccggcaaagcttccagaaggagacagag
tccgctcctggctccccgcgtcctgccagcccggtgcccaccaagacagaggaggtcagt
aacctgaagacgatgcccaagggcctgtccgccagcctgccggacctggattcagagacg
tggatcgaagtgaagaagaggcctcggccctctcctgccaggcccaagaaaccagaggag
tcaaagaccccgcagcagcagaagcaaaaggaccaagacgaacccgaggagttggatttc
ctcttcgacgaggagatggagcagatggacggccgcaagaacacgttcaccgactggtca
gacgaggattcggattatgaaatcgatgatcgggatgtgaacaagatcctcatcgtgaca
cagacgcctccttacctgcgccggcatcctggcggggaccggactggcaaccatacatcc
agggctaaaatgagctcagagctggccaaggtgatcaacgacgggctgtactactacgag
caagacctgtggacggagcagtttgagccggagtactcgcagatcaagcaagaggtggag
aacttcaagaaggtgaacatgatcagcagggagcagttcgataccctgaccccagagccc
cctgtggatccaaaccaggaggtccctcctggcccccccaggttccagcaagtacccaca
gacgcgttggctaacaagctgtttggagtccccgaaccttccaccatcgcccggtctttg
cctacaaccgtaccagaatcacccaactatcgcaacgccaggaccccccggacccctcgc
acgccgcagctgaaggacccgacccagaccccccggttctacccggtggtgaaggagggc
aggacaatagatgccaagaccccacggaagaggaagacgaggcacagttcaaaccccccg
atggagtgccacgtgggctgggtgatggactcgcgggagcacaggccccgaaccgcctct
atcagctccagcccctcagaggggaccccagctgtcggaagctacggctgcaccccgcag
tccctgcccaagttccaacacccttcccacgagctgctcaaggagaacggcttcacgcaa
catgtctaccacaagtaccgtcggcgctgccttaacgagcggaaacgactgggcattggt
cagtcccaggagatgaacacgctcttccggttctggtccttcttcctacgagatcacttc
aacaagaaaatgtacgaggaattcaagcaactggctgtggaggatggaaaggagggatac
aggtacggtctggagtgccttttcagatactacagctatgggctggagaagaaattccgg
ccagacatatttaaggactttcaagaagagaccatcaaggattacgaagctggtcagctc
tacgggctggaaaagttctgggccttcctaaaatattccaaagccaaaaacctggacatc
aacagcaaactgcaagaatacctcagcaagttcaagcgcctcgaggacttccgagtggac
ccacccatgggagaggaaggaggacacaagagatacccggcgacatcggggggagacggc
aggaagcgctacccgtcccagtcttccagcaaaacggtcagccagtgcccagccagccaa
gcccacgcctcgcccagccagcctgcacaagaggatgccaaaaacctgagccagcaagtc
cctgcccctgcagccgcagaattgcagacagtggggaagtag

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