Cygnus atratus (black swan): 118254603
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Entry
118254603 CDS
T09349
Symbol
MEX3C
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118254603 (MEX3C)
04121 Ubiquitin system [BR:
cata04121
]
118254603 (MEX3C)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118254603 (MEX3C)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118254603 (MEX3C)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118254603 (MEX3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
Prok-RING_4
RING_XB3-XBAT31
zf-C3HC4
KH_2
KH-I_KHDC4-BBP
KH_DEAH11_2nd
zf-RING_UBOX
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
118254603
NCBI-ProteinID:
XP_050572302
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All DBs
Position
Z:2032034..2047766
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AA seq
652 aa
AA seq
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MPSGGGAAAAAAASSPAAASPGEPPRLLLPPPPLLLLQRPDALLRHRLAGLGLRHRGQPA
GSRRQARQQQQQQRRRQRGGGDGSGPPPEPPGEEEEEEEEEEAADEGDLELDEEEEEELA
GEEEEEEEEEEEEEDPAALLLLSSSSSPSLPPPPPLLPPLGSVLLSPAFDAQEAAAALYG
ADEPQGMMAAGLPHAYSGGGGAAAAAAAGLSGEQAALLRRKSVNTTECVPVPSSEHVAEI
VGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREILSAAEHFSMIRASR
NKNGPALGGLPCTPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDK
EPVFEVTGMPENVDRAREEIEMHIAMRTGNYIELNEENDFHYNGTDVSFEGGTLGSAWLT
SNPVPPSRTRMISNYRNDSSSSLGSGSTDSYFGSNRLADFSPTSPFSTGNFWFGETLPSV
GTEELAVDSPAYDSLPTPSQTIWTPFEPVNPLSGFGSDPTSNVKPQRRGSQPSTPRLSPT
FPESLEHPLARRVRSDPPSTGSQAGLPIYIPAFSNGTNSYSSSNGGSTSSSPPESRRKHD
CVICFENEVIAALVPCGHNLFCMECANKICEKETPSCPVCQTAVTQAIQIHS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcggtggcggcgccgccgcggcggcggccgcctcctcccccgccgccgcctcc
cccggcgagccgccgcgcctcctcctgccgccgccgccgctgctgctcctccagcggccc
gacgccctcctgaggcaccgcctcgccggcctcggcctccgccaccgcgggcagcccgcg
gggagccggcggcaagcccggcagcagcagcagcagcagcggcggcggcagcgggggggg
ggggacggctccgggccgccgccggagccccccggggaggaggaggaggaagaggaggag
gaggaggcggccgacgagggggacctggagctggacgaggaggaggaggaggagctggcg
ggggaggaagaagaggaggaagaggaggaggaggaggaggaggacccggccgcgctgctg
ctgctctcctcgtcctcctcgccctcgctgccgccgccccccccgctgctgccgccgctg
ggctccgtgctgctgtcgcccgctttcgatgcgcaggaggcggcggcggcgctgtacggg
gcggacgagccgcagggcatgatggcggcggggctgccccacgcctacagcggcggtggg
ggggcggcggcggcggcggccgcgggcctgagcggcgagcaggcggcgctgctccgccga
aagagcgtcaacaccaccgagtgtgtgcccgtgcccagctccgagcatgtggccgagatc
gtgggccgccagggttgcaaaataaaagcgctaagggccaagacgaatacttacattaag
acccccgttcgtggagaagaacccatcttcgtcgtcactggacggaaagaggatgtagcc
atggccaaaagggaaattctctccgctgctgagcacttctccatgatcagagcgtcgcgc
aacaaaaacggtcctgccctgggaggcttgccatgtacccccaacctgccagggcagaca
acagtccaagtcagggtgccttaccgtgtagttgggctagtggttggacctaaaggagct
acaatcaaaagaattcagcagcagacgcatacctacatagtcactcccagcagggacaag
gagcccgtcttcgaagtcacggggatgcctgaaaacgtcgaccgggcgcgcgaggaaatc
gagatgcacatagccatgcgtaccggcaactacatcgagctgaacgaagagaacgacttc
cattacaacggtaccgatgtgagcttcgagggaggcactcttgggtccgcgtggcttact
tctaaccccgtccctcctagccgcaccagaatgatttctaattacagaaatgacagctcc
agctccttgggaagcggctccacagattcctattttggaagcaatagattggctgacttc
agcccaaccagcccgttcagcacaggcaacttttggttcggagaaacgctaccttccgtg
ggcacagaagagcttgcagtcgactctcctgcgtacgactccttaccgacgccttcccaa
accatttggacccctttcgaacccgtaaacccgctctctggctttggtagcgaccctacg
agtaacgtcaagcctcagcgcagagggagccagccatccactcctcgcctgtcgcccacc
ttcccggaaagcctggagcaccccttggctaggagagtgaggagcgacccccctagcacg
ggcagccaagccggccttcccatctacatccccgctttttctaacggtaccaacagctat
tcctcttccaacggcggctccacctccagctcgccccccgagtcgagacgaaagcacgac
tgcgtgatatgcttcgagaacgaagtcattgcggccctggtcccctgcggccacaatctc
ttctgcatggagtgtgccaacaaaatctgtgaaaaagaaacgccatcgtgtcctgtttgc
cagacagctgttactcaggcaatccaaatccactcttaa
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