Cygnus atratus (black swan): 118254665
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Entry
118254665 CDS
T09349
Symbol
PTCHD4
Name
(RefSeq) patched domain-containing protein 4 isoform X1
KO
K24682
patched domain-containing protein
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118254665 (PTCHD4)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Other domain-containing proteins
Patched domain-containing proteins
118254665 (PTCHD4)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
118254665
NCBI-ProteinID:
XP_035416022
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Position
3:complement(6765939..6855232)
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AA seq
887 aa
AA seq
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MLRQVIHRGLQSFFYKLGLFVSRHPVFFLTVPAVLTIIFGFSLLNRFQPDTDLESLVAPS
HSLAKIERSLASSLFSLDQSKSQLYSDLHTPGRYGRVILLSKPGGNILHQADVILQIHRA
VLEMKVNYKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQAALSNKTTARVQVSYPNT
KLKDGRSSFIGHQLGGVMEVPNSKDQRVKSARAIQITYYLQTYGSVTQDLIGEKWESEFC
KLMHKMQLDHQDLQLYSLASFSLWKDFHQTSLLARGKILVSLMLILLTATLSSSMKDCLR
SKPFLGLLGVLTICISSVTAAGIFFITDGKYNSTLLGIPFFAMGHGTKGVFELLSGWRRT
RENLPFKDRVADAYSDVMVSYTMTSSLYFIAFGMGASPFTNIEAVKVFCQNMCVSILLNY
FYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDRKPVWFQTMMNDGHQHTSHHETN
PYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGCLQINDGANIINLLASES
PSVSYALIQQKYFSNYSPVIGFYIYEPLEYWNGTVQEDLKTLSQGFNTVSWIEQYYQYLR
VGNISATNKSDFISILQSSFLKKPEFQHFKNDIIFSKAGDENNIIASRLYLVARTSENTQ
REAVELLEKLRPLSLIQSIKFIVFNPTFVFMDHYGLSVTMPVLISGFGILLVLILTFFLV
IHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFAIDHCAPLLYTFVLA
TEHTRTQCIKNSLQEHGTAILQNISSFLIGLVPLLFVPSNLTFTLFKCLLLAGSCTLLHC
FVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDHVTAV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggtgatacacagagggctccagtcgtttttctacaagctgggcttattc
gtgagcaggcatccggtgtttttcctcactgtgcccgcagtcctgaccatcatcttcggc
ttcagcctgctcaaccgcttccagcctgacactgacctggagagcctggtagcccccagc
cacagcctggccaagatcgagaggagcttagccagcagccttttctccctcgatcaatcc
aaaagccagctgtattcggacttgcacaccccggggaggtatggcagggtgattctcctc
tccaaacccggaggcaatattttgcatcaggctgatgtgatcctgcagatccaccgagcc
gtgctggaaatgaaggtgaactacaaaggctataattatactttttcccatctgtgtgta
ttgagaaatcaggataagaaatgcgtgctggatgatattatttcagtgctagaggatctg
aggcaggctgccctctccaataagacaacagccagggtgcaagtgagctatcccaacact
aaattaaaggatggaaggagcagttttattggccaccagctcggaggggtcatggaagtg
cccaacagcaaggaccagagagtcaaatcagccagagccatccaaatcacttactacctc
caaacgtatggctctgtcacccaggacctcattggggagaagtgggagagtgaattctgt
aaactgatgcacaagatgcagctggatcaccaagatctgcagctctactcactagcgtcc
ttcagcctctggaaggacttccaccagaccagtctcttggccaggggcaagattttggtg
agcctgatgctgatcctcctgactgctaccctctcgagctccatgaaggactgcctgcgt
agcaaacctttcctgggactcttgggagtactcactatctgtatttccagtgtcactgcg
gcagggatatttttcattactgatggaaaatataattctactctgttgggaatccctttc
ttcgctatgggtcatggaaccaaaggagtatttgaacttctttcaggatggcgtcgaacc
agagagaatctgccattcaaggacagagtagcagatgcctactcagatgtcatggtctcc
tatacaatgacaagctccttgtatttcatagcctttggcatgggtgcaagccctttcacc
aacattgaagctgtaaaagtcttttgccagaacatgtgtgtctcgatcctgttaaactat
ttctatatcttctccttcttcggctcctgtttggtctttgctggccagttggagcagaat
cgttatcacagcatcttctgctgtaaaatcccttcagcagaatacctggaccggaaacct
gtgtggttccagaccatgatgaacgatggtcatcagcatacttctcatcatgagaccaac
ccgtaccagcatcactttatccagcatttcctccgagagcattacaatgagtggattacc
aacatctatgtcaaaccatttgtggtgatactgtatctcatctatgcctctttctccttc
atggggtgcttacagattaacgatggagccaacattatcaaccttcttgccagtgagtct
ccaagtgtatcctatgccctcatacagcaaaagtatttcagcaactacagcccagtgata
ggcttctatatttatgaacctctggagtactggaatggcactgtgcaagaagacctaaaa
acactgagccaggggttcaacacagtgtcctggattgaacagtattaccagtaccttcga
gtgggtaacattagtgcaaccaacaaaagtgactttatcagtatcctccagagctccttt
ttaaaaaagccagaattccagcacttcaaaaatgacatcattttctccaaagctggagac
gagaacaacattattgcttctcgtttgtacctggtggccaggactagtgaaaacacacag
agggaggcagtggaattgttggagaagctgagacctctctctcttatacagagcatcaag
ttcattgtgttcaatcctacctttgttttcatggaccactatggtttatcagtaactatg
cctgtcctgatttctggttttggcatcctgctggtgttaatactgacctttttcctggtt
atccaccctctgggaaatttctggttaattctcagtgtcacctcaatagagctgggtgtc
cttggcttgatgaccttatggaatgtagacatggattgcatttctatactgtgccttatc
tacactttgaattttgccatagatcactgtgcacccctgctttatacatttgtactagca
actgagcacacccgaactcagtgtataaagaactccctccaagagcatgggacagccatt
ttgcagaacatttcttcttttcttattgggttggtcccccttctctttgtgccttcaaac
ttgaccttcacactgttcaaatgcttgctgcttgccggcagttgcacacttctgcactgt
tttgttattttgcctgtcttcctaacctttttcccaccttccaaaaagcaccacaagaaa
aagaaacgagccaaaagaaaggaacgagaagagatcgaatgcatagaaattcaggagaat
cctgatcatgtgacagcagtctga
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