Cygnus atratus (black swan): 118254892
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Entry
118254892 CDS
T09349
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118254892 (COL23A1)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118254892 (COL23A1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
118254892
NCBI-ProteinID:
XP_035416530
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Position
14:complement(4844146..5020091)
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AA seq
515 aa
AA seq
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MSAAAGAGTAAGTATSALCLLLSLTAVAVCLLLGAKTAELQGRLAALEERGAAGPGPLLD
ALQPRLEQLLREKLGEGLAKLRTAREAPSDCMCPPGPPGRRGKPGRRGEPGPAGQSGRDG
YPGPLGLDGKPGPPGPKGEKGEAGDIGPRGDQGREGATGPPGPPGPPGARGPPGDTGKDG
PRGPPGPPGFKGDPGEDGLMGARGPPGPKGEPGMQGKKGDDGIPGEPGLTGSKGEKGSTG
PKGENGTDGAPGPKGEPGEKGGIGSIGPRGPPGLKGEQGDTVVIDYDGRILDALKGSPGP
PGPPGPQGAPGPKGELGLPGPPGLDGEKGPKGAKGDQGSAGIAGQKGETGEMGLSGPPGA
DGPKGDKGDTGSPCLQNNHIIPEPGPPGLPGPMGPPGIQGPKGLDGAKGEKGDSGEKGEH
GDPGPAGLPGAPGLIGLPGTKGEKGKPGEPGLDGFPGLRGEKGEKSERGEKGERGIPGRK
GAKGQKGEPGPPGLDQPCPVGPDGLPVAGCWHKVQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggccgcaggagccggcaccgcggcgggcaccgccacctccgccctctgcctg
ctcctctcgctcaccgccgtggccgtctgcctgctgctgggcgccaagacggcggagctg
cagggccgcctggccgccctggaggagcgcggagccgccggccccgggccgctgctggac
gcgctgcagccccgcctggagcagctcctccgagagaaactgggtgaaggactagctaag
ctgcggacagcgagagaggctccgtcagactgcatgtgccccccaggccctccggggagg
cgagggaagcctggacggcgcggagagcccggacctgcagggcagtcaggacgcgatggt
tatccggggccccttggcttggatggcaaaccaggacctccaggaccaaaaggggaaaag
ggtgaagcaggggacatcggcccaaggggcgatcaaggtcgagaaggagccactggcccc
cctggtccgccaggacccccaggtgcccgggggcctcctggtgacacaggaaaggatggc
ccaagaggacctccaggcccccctggttttaaaggcgacccgggagaggatggcctcatg
ggcgccaggggacccccagggccaaagggtgagcctggcatgcaagggaagaagggtgat
gatggcatcccaggggaaccaggacttacgggctctaagggggaaaaaggaagcacaggt
ccgaagggagagaatggcacggacggcgcgccaggacccaagggtgaacctggcgagaag
ggtggaattggctccatcggaccacggggtccccctggcctgaagggggaacagggcgac
actgttgtgatcgactatgatggccggatcctggatgcactcaagggttcgccgggtccc
ccggggccgccaggcccgcaaggcgctccaggccctaagggggagctgggcctgccgggt
ccacctgggctagatggcgaaaagggtcccaaaggagctaagggtgaccaaggcagcgca
gggatcgcgggacagaaaggagagacgggagaaatgggcttatcgggtccaccgggagca
gatgggccaaaaggagacaaaggagacactggatcgccatgtttgcagaataaccatatc
atcccggagccaggaccccccggattgcccggccccatgggtcctccaggaatccagggg
cctaaaggcttggatggtgccaagggagaaaagggggatagcggcgagaagggggagcac
ggcgacccgggaccggctggtctccctggtgcccccgggctcatcggcttacccggtacc
aaaggagagaagggaaagccgggggagccaggactagatggtttcccaggactcagagga
gagaaaggagagaagagtgaaagaggggagaagggtgagcgaggaatcccagggagaaaa
ggagccaaagggcagaagggggagcctggccctcccggactggatcagccctgccccgtg
ggaccagatggactgccagtagcgggatgttggcataaggtacagtaa
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