Cygnus atratus (black swan): 118254938
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Entry
118254938 CDS
T09349
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118254938 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118254938 (IRF1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118254938 (IRF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
118254938
NCBI-ProteinID:
XP_035416631
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All DBs
Position
14:1809653..1816244
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AA seq
317 aa
AA seq
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MPVSRMRMRPWLEMQINSNQIPGLIWINKDKMMFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKVGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKDQK
KERKSKSSREARSRSKRKPYEDMRTEESAERLTNTPPADDHSGYTVHDYTGQEVEVESAS
ITLDLSSCEVTGSLTDWRTPMEIAMADSTNDLYHLQVSPLASSSEVTDEDEDEMKADIFK
LLEPGQDWHTTSVGGKGFLTNEPGTQTMCSTYSYKDQDGEIDTSSGEMEFRMFDQKSSLD
FSWLETVRPMQTISCGL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtctccagaatgcgcatgaggccctggctggaaatgcagattaactccaatcaa
atcccgggactgatatggattaacaaggataagatgatgtttcaaatcccctggaaacac
gcagctaagcatggctgggacatggagaaagatgcctgccttttccggagctgggccatt
catacaggaaggtataaagttggtgagaaagaccctgacccgaaaacctggaaggcgaac
ttccgctgtgctatgaactcgctgcctgacatcgaagaagtgaaggataaaagcatcaac
aaaggctccagcgctgttagagtttacaggatgctgccgcccttgacaaaggatcagaag
aaagaaaggaagtcaaagtcttcaagagaggcaagaagcaggagcaagagaaagccgtat
gaagacatgaggacggaggagtcagcagaaagactaaccaacactcctccggcagatgac
cacagtggctacaccgttcatgactacacgggacaggaagtggaggtggagagcgcgtcc
atcaccttagacctctcctcgtgcgaggtgaccggctccctcaccgactggaggacgccg
atggaaatcgccatggctgacagcaccaacgacctctaccacctccaggtgtcccccctg
gcttcatcctcggaagtcacagatgaagatgaagatgaaatgaaagcggatatttttaag
ctgctcgaaccaggacaggactggcacacgaccagcgtcggggggaaaggcttcctcacc
aacgagccgggcacgcagaccatgtgcagcacgtacagctacaaggaccaggacggcgag
atcgacacctcttcgggggagatggagttccgcatgttcgaccagaagagcagcctggac
ttctcttggctggagacagtgagacccatgcaaaccatctcctgtggcttgtaa
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