Cygnus atratus (black swan): 118255012
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Entry
118255012 CDS
T09349
Symbol
RNFT1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118255012 (RNFT1)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118255012 (RNFT1)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118255012 (RNFT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf-RING_6
RING_XB3-XBAT31
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
118255012
NCBI-ProteinID:
XP_035416762
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All DBs
Position
20:complement(8806211..8815237)
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AA seq
389 aa
AA seq
DB search
MQANCSHLHNIPGSGDDSSPSQSTHAARSSGESSCHHSGDVHIQLSTAAGEGRENASSRP
SRPGSQSRSHGHAHNEAGGLDDSAPDSEEHSGSSLSELRYLLQWLHKSLPYILILCVKLI
MQHIIGISLGIGLLTTYMYANKSIVNQVFLRERCSKLQCAWLLVYLTGSSLLLYYTFHSQ
SLYYSLIFLNPTVDFKNFWEVLWIVGVTDFILKFLFMGFKCFILLVPSFMMSFKSKGYWY
MLLEELCQYYRMFVPIPVWFRYLIGYGEPDSVLGWTLGILLGLLYLILKLLSFFGQLRNF
KQVLRIFCTRPHYGVMASKRQCSESDDICAICQAEFQKPILLICQHTFCEECISLWFNRE
KTCPLCRTVISDHVNKWKDGATSMHLQIF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaactgcagtcatctccacaacatcccagggagtggtgatgactcttcacct
tctcaaagcacccacgcagcgaggtcatcaggagaaagctcatgccatcatagcggagat
gttcacatacagctaagcactgctgcaggagaaggcagagaaaatgcgagttcccggcct
tcgaggccaggttcccaaagtcgctcacacggacatgcccacaacgaagcaggggggctt
gatgactctgctccagactcagaggaacacagcggcagctccctctcagagctcagatac
ctcctccagtggctgcacaaaagtctgccgtatatcttgattctgtgtgtcaaattgatc
atgcagcatataattggcatttctcttggaattgggctgctaacaacttatatgtatgca
aacaaaagcatagtaaatcaggtttttctaagagaacggtgctccaagttgcaatgtgct
tggttactagtatacctaactggatcgtctctcctcttgtattacacctttcattctcag
tcactgtactacagcttaatctttttaaaccctactgtggattttaagaacttctgggag
gtgctttggattgtgggagtcacagactttattctgaaattcctcttcatgggcttcaag
tgctttattctcttggtgccttcttttatgatgtcctttaaatccaagggctactggtac
atgctgttagaagaactctgccagtattaccgtatgtttgtccctataccagtttggttc
cgttatcttattggctatggggagcctgacagtgtgctaggctggacccttgggatattg
ctgggccttctctacctcatcctaaagcttttgagtttttttggacaattgagaaacttc
aaacaggttttacggatattttgtacacgaccacactatggggtgatggctagcaagaga
cagtgttctgaatcagatgatatttgtgctatctgtcaagctgaatttcagaagcctatt
ctgcttatctgtcagcacacattttgtgaagaatgcatctctttatggtttaatagagaa
aaaacgtgtccactctgcagaactgttatttcagaccatgttaacaagtggaaggatgga
gctacatctatgcatctacagattttctaa
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