KEGG   Cygnus atratus (black swan): 118255016
Entry
118255016         CDS       T09349                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1 isoform X1
  KO
K14855  ribosome assembly protein 4
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cata03009]
    118255016 (NLE1)
Ribosome biogenesis [BR:cata03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    118255016 (NLE1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF12 NLE Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 PD40 eIF2A RMC1_N Ge1_WD40 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Cytochrom_D1 FAD_binding_9 PALB2_WD40
Other DBs
NCBI-GeneID: 118255016
NCBI-ProteinID: XP_035416770
LinkDB
Position
20:8069541..8076552
AA seq 508 aa
MAGTAPPEDVERLLIQFRDEAGEPLGSPFDVPLRITPGELQLVCNALLQEVRPPAPGHRA
SWHPGCPAPPLLPLLFQDDPVPLAFFFRDAEIVVSLEKTLAGQAVETEKVLDIVYQPQAV
FRVRAVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRH
WVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLAGHSRWITCLCWEPLHINPECR
YLASASKDGSVRIWDTVMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDG
VLCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDVSGSLAELKEKAQQRYEKVR
GSGPERLVSGSDDFTLFLWKPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIK
LWDGRTGKYLTALRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHAD
EVFATDWSPDGQRVASGGKDKCLRIWRR
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcgggcacggcgcctcccgaggacgtggagcggctcctgatccagttccgcgatgag
gccggggagcccctggggtcccccttcgacgtcccgctccgcatcacgccgggcgagctg
cagctggtgtgcaacgcgctgctgcaggaggtgaggccgcccgccccggggcaccgggcg
tcctggcacccgggctgccccgcgccaccgctcctgccccttctcttccaggacgacccg
gtgccgttggccttcttcttccgcgatgccgagatcgtggtgtcgctggagaagaccctg
gcggggcaggcggtggagacggagaaggtcctcgacatcgtctaccagccgcaggcggtg
ttcagggtgcgggcggtgacccgctgcaccagctccctggaggggcacaccgaggccgtc
atctccgtcgccttcagccccacgggaaagtacctggcgagcggctctggagacaccacg
gtccgcttctgggacctcagcacggagacgccgcagttcacagctaaaggtcaccgacac
tgggtgctcagcatcgcctggtctcctgatggcaagaagctggcctcaggctgcaagaac
agccagatatttctctgggacccagccaccggcaatcagatcggtcgggttctcgccggc
cactccagatggatcacgtgcctgtgctgggagccgctccacataaacccggagtgccgc
tacctggcaagtgcctccaaggatggcagtgtccgcatctgggacacggtgatgggcagg
tgtgacaaaatcctgacgggccacacgcagtcggtgacgtgcgtgaagtggggtggcgat
ggcttgctctactcctcctcccaggacagaaccatcaaagtctggaggagccaggacggc
gtcctctgccgcaccctgcagggccacgctcactgggtgaacaccatggcccttagcacc
gactacgttctccgcaccggtgccttcgaacctgctgaagccaccatcaacccgcaggat
gtgagcggctccttggcagaactgaaggaaaaggcacagcagaggtatgaaaaagtcagg
ggctcaggaccagaaaggctcgtctcggggtcagatgatttcacgctgtttctttggaag
ccagcagaagacaagaagccactggagagaatgacaggccaccaggcactgattaaccaa
gtcctgttctcaccagacacgcggataatagctagtgcttcctttgacaagtcaataaag
ctctgggatggcaggacaggaaagtacctgacggcgctgaggggacacgtctcggctgtg
tatcagatcgcctggtcagccgacagccgcttgctggtgagcgggagcagcgacagcacg
ctgaaggtttgggatgctgagacaaagaaactggccattgatcttcccggccatgcggac
gaggtgtttgcaacagattggagcccagacggacaaagggtagcgagtggagggaaggat
aagtgtttgcggatatggcgtagatag

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