Cygnus atratus (black swan): 118255030
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Entry
118255030 CDS
T09349
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118255030 (VPS53)
Membrane trafficking [BR:
cata04131
]
Protein recycling
Others
EARP complex
118255030 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
118255030 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
Laminin_II
GrpE
Syndetin_C
hAT-like_RNase-H
COG3_N
NBD94
DUF5654
COG5_N
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
118255030
NCBI-ProteinID:
XP_035416796
LinkDB
All DBs
Position
20:8243290..8303326
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AA seq
831 aa
AA seq
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MEEDEPELAAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKDITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRPGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPQEWCMTERIAVEFCHVTRTELSKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLGDGTVKKPEVPPPSTNPFLEDEAGTETDEIVIEKSDAEKPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSSGLTITSLLKEKEGSEV
AKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNS
IQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRK
YFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKA
PASYTRIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRS
EQSSMLDLFRQRLPAPPSGAESTGSLSLSTPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagcccgaactggcggcggggctggaggcggcgctggagctggcgccc
gccgtgcaggccgcgatcgagcaggtgtttcccagccaagatcccctggacagagcagat
ttcaatgctgtggagtacattaacactctctttcccactgagcaatctttggcaaacatc
gatgaagttgtgaacaaaatcagattgaaaataaggaggttggatgacaacattcgaact
gtagtgaggggacagacgaacgtgggacaggatggcaggcaggccctggaagaagctcag
aaagccatccagcaactctttggtaaaattaaggatattaaagacaaggctgaaaaatca
gaacaaatggttaaagatatcacgcgggatatcaagcagctagatcacgccaagcgtcat
ctgaccacctccatcaccaccctcaatcacctgcacatgctggcaggaggagtggactca
ctggaggctatgaccaggaggagacagtatggggaagttgccaacctcctccaaggcgtt
gtgaatgtgttagagcacttcaacaaatacatggggattcctcagattcggcagctttct
gaaagggtgaaggcagcgcaaaatgaattaggacagcagatcctggctgactttgaggaa
gcctttccttctcaaggtacaaagaggcctggtggacccagcaacgtcctgcgtgatgcg
tgtctagttgcaaatgtcctggatcccagaatcaaacaggaaatcatcaagaaatttatt
aaacaacacctctcggagtatctggtccttttccaagagaaccaagatgtcgcctggctg
gataagattgacaggcgctatgcttggataaaacgtcagctggtggactatgaggagaaa
tatgggcgcatgtttccccaggagtggtgcatgacagagcgcatcgctgtggagttctgt
cacgtcacaaggactgagctctcaaagataatgcgtacaagagcaaaggagattgaggtc
aaattgcttttgtttgcaattcagaggacaaccaactttgaaggacttctggctaaacgc
ttctcaggttgcactctaggtgatgggacagtgaaaaagccagaagtgcctcctccctct
accaacccatttctcgaggatgaagctgggacagagacagatgagattgtaattgaaaaa
agtgatgcagaaaaaccaaagaagccaaaggcccctgacaatcctttccatggcattgtt
tccaagtgctttgagcctcacctttatgtgtatatcgagtcccaggacaaaaatctcagc
gagctgatcgacaggtttgtggctgacttcaaggctcaaggtcctcccaagcccaacgtg
gatgaaggaggagctgtcctgcccagctgtgccgacctctttgtttactacaagaagtgc
atggtgcagtgctcccagctcagcacgggcgaaccgatgatagccctcaccaccatattc
cagaagtaccttcgggaatatgcctggaaaattctgtctggaaacctgcccaagacaact
agcagcagtagcgggctcaccatcactagtttgctgaaagaaaaggaaggctctgaagtg
gcgaagtttactttagaagaactctgcctcatttgcagcatccttagtacagcagagtac
tgcctggcgaccacccagcagttggaagagaaactcaaagaaaaagtggatgcaagtcta
gtggagaggatcaacctgacgggagagacagacactttcagcatcgtgatctccaacagc
atacagctgttagtacaggacctggatgctgcctgtgaccctgccctgactgcgatgagc
aagatgcagtggcagaacgtggaacacgttggcgatcagagtccttatgtcacctcggta
atcctccacatcaagcagaacgtccccatcatccgcgacaacctggcatccacgaggaag
tacttcactcagttctgcatcaagtttgcaaactccttcattcccaagttcattaaccac
ctcttcaagtgcaaacccattagtatggtgggagcagaacagctgctgctggacacccac
tccctgaagatggttctcctggatctgccctccattgggtcccaggtggtgaggaaggct
cccgccagctacacgcggatagtggtgaaaggcatgactcgggctgaaatgatcctgaag
gtggtcatggctccacatgagcccccggttgtatttgttgacaattacatcaagctcctt
gctgactgcagcacagacactttccagaagatactagacatgaagggactgaagaggagc
gagcaaagcagcatgctggacctcttccgccagcgcctcccggcaccgccctctggagcg
gagagcaccggctccctctcgctgagcactcctacgccggagcaggagtcctctcggata
cggaagctggagaagctcatcaaaaaaagactctaa
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