Cygnus atratus (black swan): 118255059
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Entry
118255059 CDS
T09349
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118255059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118255059
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118255059
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
118255059
NCBI-ProteinID:
XP_035416863
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All DBs
Position
20:7915407..7926555
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AA seq
843 aa
AA seq
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MSSILGKMKKFGSSDLEESEVTDEHTDGEDSALETPDSLQGTLSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFYQMDHLMAPSVIKFHTNLERGRLHKLLSTDSITGCSEKAFRFYD
RRRIFDAVAQGNTRDLDDLLLYLNRTLKHLTDDEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIAKKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEIIAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHIIILTAAAYYRPVDKKEKPPFTFGHSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLKTLIVDSYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDANTSEYTRCCHTKRSRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVSKIAQESKSIWKLQRAITILDIENSYL
NCVRRSFRSGKQVLVGVTPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLKRNP
SYSIKPGRVSGKNWKTLVPLLRDGSRREETQKLPEEIKLKPILEPYYEPEDSETLKESLP
KSV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccattcttgggaagatgaagaaatttggcagttctgacctggaggaatctgaa
gtgacagatgaacacacagatggtgaggactctgcactggaaacacctgacagcctccag
ggtacgctcagcaccaaggtgcagccacctaaaagcaacatctttgcaagacgtgggcgg
tttgttatgggggatagtgacaaggacatggctcccatggattccttctaccagatggat
cacctgatggcaccttctgtcatcaaatttcacaccaatttggagagagggagacttcac
aagctcctatctacagattccatcacaggctgctctgaaaaagctttcagattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaagggacctggatgatctgcta
ctctatcttaataggaccttgaagcatctcacagatgatgaattcaaagaaccagaaact
gggaaaacctgcttgcttaaagccatgctgaatctacatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaagaaaactggaactctgaaagagtttgttaatgcagag
tataccgacaactactacaagggccagactgcactccacattgccattgagagaaggaac
atgtacctggtgaagctcttggtccagaatggagcagatgttcatgcaagggcctgtggg
gagttcttcaggaaaatcaaagggaaacctggtttttatttcggagagctgcctctatcc
ctggctgcctgtaccaaccagctctgcattgtgaaattcctcctggagaacccgtaccag
gctgccaacattgccgctgaggactccatgggcaatatggtcctgcataccctggtggag
attgcagacaatactaaggataataccaagtttgttaccaagatgtataacaacatattg
atccttggtgccaaaattaatccaatcctgaagctagaagaactcaccaacaagaaaggg
ctgactccattaactctggcagctaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagaccctgagtgcaggcacttgtctaggaagttcactgaatgggct
tatgggcctgtccactcatctctttatgacctgtcctgtatagacacatgtgagaaaaat
tcagtgcttgagattattgcctacagcagtgaaacgccgaatcgtcatgagatgctgctg
gtggaacccctcaacaggctgctgcaagacaagtgggaccggtttgtcaaacacttattt
tacttcaacttctttgtctataccatgcatatcatcattctcactgcagctgcctactac
agacctgtggataagaaagaaaagcctcccttcacgtttggtcacagcactggagaatat
tttcgagtgactggagagatcttgagtgtactgggaggactctatttttttttcagaggg
atacagtattttgtgcagaggcgcccatcattgaagacgctgatagttgacagctacagt
gaggttcttttctttgttcactctttgctcctcctgagctctgtggtgctgtacttctgt
ggccaggaactgtacgtggcttccatggtcttctccttggcgctgggctgggctaacatg
ctgtactacacccgtggcttccagcagatgggcatttactctgtcatgattgcaaagatg
atccttagagatttatgtcgcttcatgtttgtctatctagtattcctcttgggattttcc
acagctgtggtgactttaattgaagatgacaatgaggggcaggatgcaaatacctctgaa
tatacccgatgttgccatacgaaacgaagccgcacatcctataatagtctatattacacc
tgcttggagcttttcaagttcactattgggatgggagacttggagttcacagagaactac
aggttcaagtctgtgtttgtcatccttttggttctctatgtcatccttacgtacatcctt
ctgctcaacatgcttatcgcactcatgggagaaactgtgagcaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcttggatattgaaaacagctacttg
aactgtgtgaggcgctcgttccggtctggaaagcaagtcttggtgggggtcacgcctgat
ggccaagatgattacagatggtgctttagggttgatgaagtgaactggtccacgtggaat
actaatctgggcataatcaacgaagatcctggatactctggagacctcaaaagaaatccc
agttactctattaagcctggcagagtttcaggaaaaaactggaaaactttggttccgctt
ttaagagatgggagcaggagagaagagacacaaaaactaccagaagaaatcaagttaaaa
cccattttggagccttattatgagccggaggattctgagacattgaaggaatctcttcca
aagtcagtctaa
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