Cygnus atratus (black swan): 118255060
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Entry
118255060 CDS
T09349
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118255060 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cata01009
]
118255060 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118255060 (NCOR1)
Protein phosphatases and associated proteins [BR:
cata01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118255060 (NCOR1)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
118255060 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
118255060
NCBI-ProteinID:
XP_035416865
LinkDB
All DBs
Position
20:complement(7667314..7736433)
Genome browser
AA seq
2532 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPTHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDS
HFQRVSAATVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLS
KEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQ
IIYDENRKKTEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRN
HARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQE
RFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKF
INMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLY
YYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKAEKADKKEEEKKDE
EEKDEKEESKENTKEKDKTEVAPEETEEREQATPRGRKTANSQGRRKGRITRSMTNEAAQ
ANAAAAAATEEPPPPLPPPPEPSSAEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVG
TKSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIE
ASNEEENPEDSEGAENSSDTESAPSPTPAEPAKPSEETPPDNAASKITTEAAAEQESVKP
AASTSPSLTAQSVSTAESQTSEPQVKEEINNEAEEPMDVDSRSHAVEAKPVLNLPVHTKV
EPVETEMRLPENIQVKIESDAKEREMEKPKEKSEPEEMDYSLSQQVNSARQESHSDNDSS
ATCSADEEVDGEPDRQGIFRESKPSLLNPTGSILVSPTIKQGQMDLQQLHHRAAVIPPMV
SCSPCTVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSSVSPCGTSKSPN
VEWEGKPVAYMPYAEVKRAIEQEAQVQNTATRSASPYRLSPREVNKASPQPDMNAARYSV
PPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTPG
TYLTSHSQASYTQETAKPSVGSISLGLPRQQESAKAASLPYIKQEEFSPRSQNSQPEGLL
VRAQHEGVVRGTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALSQSGIAADALLKG
TITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDTIKNVREGTRSPRTAHEISLKR
SYDTMEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRATS
ESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQESR
KTPEMVQTARPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMVPE
NVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARRTP
VNYQSPMSRSSPMMNRVSEAGISSGKPANHERKNTLTPTQRESVPAKSPVPGVDPVVAHS
PFDPHHRGATPEVYRSHLPPHLDPAIPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYAM
ENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILVPH
PGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAEREREREREKER
ERERERERERERERERERERITSVPAELYLRPGTEQPGRPGSHGYVRSPSPSVRSQENIL
QQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVDAA
ASAPQMEVAKAKENKHEGTRIEENMGRRSAVVTEQPQMEQKTLEVEKRPVQCPYTSANFS
GGKSQGQSSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKDA
RDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPVPTQEKLQSYQQETPKPSQAENDPN
RQYEGPIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFARNQ
AASQAPLQPPTTTFQNSTPAPAPVSTRAKTSNRYSPESQLQSVHHQRPGARVSPENLSDK
SRGRPGKSPERSHVSSEPYEPISPPQVPVVHEKQENVLLLSQRTEPTEQRTDSRSPGSIS
YLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGAVSS
RGHSFADPASNLGLEDIIRKALMGNFDDKSEDHGVVISQSIAVASGSSNVAVPASSETRR
EEANPSPNSGGGVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQTPV
WAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHQQNRIWEREPAPLL
SAQYETLSDSDD
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctcctaaccaaggagcattcagcacagaacagagtcgttat
cctactcactctgtccagtacaccttccctagcacccgacaccagcaggaatttgcagtt
cccgattatcgttcgtctcacttggaagtcagtcaggcaacccagctcttgcagcagcag
cagcaacagcagcagcaacttcggcgccggccttctttgctttccgaatttcacccaggc
tctgacaggcctcaggaaagaagaactggatatgaacagcagtttcatccaggtccatct
cagacagatcatgattcactggaatctaagcgaccacgtctcgaacaagtttctgattcc
cattttcagcgtgtcagtgcagctactgtcttgcctttagtacatcctctgcaggaaggg
ttgagatctgcagatattaagaaggaccctgcttttggaggaaagcatgagggaccatca
tctccaatttctggtcagccttgtggggaggaccagaatgcttcgccttcaaagctgtcg
aaggaagaactgatacagagcatggaccgtgtagatcgtgaaattgcgaaagttgaacag
caaatccttaaactgaagaaaaagcaacaacaacttgaagaagaagctgctaagccgccg
gagccagagaggcctgtctcccctcctccagtggaacagaagcaccgcagtattgtccaa
attatttacgatgaaaatcggaaaaaaacagaagaagctcacaagatttttgaaggtctt
ggtccaaaagttgaactgccactttacaaccaaccatcagacacaaaggtctaccatgaa
aacatcaaaacaaaccaggtgatgaggaaaaagttaatactattttttaaaagaagaaat
catgcaagaaaacaacgggaacagaaaatctgtcaacgttatgatcagctgatggaagca
tgggagaaaaaagttgacaggatagaaaataatccacgcagaaaagctaaggagagcaaa
acaagagagtactatgaaaaacaatttccagaaatccggaagcaaagagaacagcaagaa
cgatttcaaagagttggtcaaagaggggctggactttcagcaactattgctagaagcgaa
catgagatttctgaaatcattgatggactttctgagcaggagaataatgaaaaacaaatg
cgtcagctctcagtcattcctcccatgatgtttgatgcagaacaaagacgagtgaagttt
attaatatgaatggtctgatggaggatcccatgaaagtttataaagacagacagttcatg
aatgtctggaccgaccatgagaaagagatttttaaggaaaagtttgtccaacatcccaag
aactttggtctaattgcttcctacctggaacgaaagaatgttcccgactgtgtattatat
tattatttgactaagaaaaatgaaaattacaaagcacttgtgcgaaggaattacggtaaa
cgcagaggaagaaatcagcaacaaattgctcgtccttctcaagaagaaaaggtagaagaa
aaggtagaagaggaaaaagcagaaaaagcagacaaaaaagaggaggaaaagaaagatgag
gaggaaaaggatgagaaggaggaatcaaaagagaataccaaagaaaaggacaaaactgaa
gttgcaccagaggaaacagaggaaagggaacaggccactcctaggggccgaaaaactgcc
aatagtcaaggtcgtcgtaagggcagaatcaccagatcaatgacaaatgaagctgcacaa
gcaaatgctgctgcagctgcagccactgaagaaccaccaccgcctcttccacccccacca
gaaccttcttctgcagaacctgtggagacatcccgctggacagaagaagaaatggaagtt
gctaaaaaaggcctagtagaacatggacgcaactgggcagcaattgccaaaatggttggg
acgaaaagtgaagctcaatgtaagaacttctacttcaactataaaaggagacacaatttg
gacagtctccttcaacagcacaaacagaagtcttcacgaaggccccgtgaagagcgagat
gtgtcacagtgtgagagcgtagcttcaactgtgtcagctcaggaggatgaagacattgaa
gcatctaatgaagaagagaatccagaagacagtgaaggtgctgaaaatagttccgataca
gaaagtgctccatctccaactccagcagaacctgctaaaccaagtgaagaaactccacct
gacaatgctgcctcaaaaataaccactgaggcagcagcagaacaggaatctgtaaaacct
gcagccagcacgtctccctccttaacagcccaaagtgtatcaacagctgaaagtcagacc
tctgagccacaggttaaggaagaaataaataatgaggcagaagaacctatggatgttgac
agtagaagccatgcagttgaagctaagcctgtgctcaatcttccagtacataccaaagta
gaacctgtagagacggaaatgaggctaccagagaatattcaagtaaaaatagagagtgat
gccaaagagagggagatggagaaacccaaggaaaagtcggaacctgaggaaatggactat
agtctatcacaacaggttaactcagcaagacaagaatcccattcagataatgattcgagt
gctacctgtagtgctgatgaggaagttgatggagagcctgacagacaaggtatcttcagg
gagtcaaagccctcactgttaaaccccactgggtcaatactggtgtcgcccacaataaag
caagggcagatggacctacaacaacttcaccaccgagctgctgtcataccaccaatggtt
tcttgcagtccctgtactgttcctgttggaacaccagtgagtggttatgcactctatcaa
cgacacattaaagcgatgcatgagtcagcactgctggaagaacaacgccagaggcaagag
cagctggatatggagtatcgaagttctgtaagcccatgcggcacttccaagagccctaat
gttgagtgggaaggaaaaccggtagcctatatgccttatgctgaggtcaaacgagcaata
gaacaggaagcgcaagtgcaaaatacagcaacgaggtcagcatcaccatacaggctgtct
ccaagagaagtcaataaagcctctccccagcctgatatgaatgcagctcgctacagtgtc
ccaccagttctccagccagctcctcaccaagtaataaccaatatacctgaaggagtccgc
cttccaactaccagacctaccagaccaccaccacccctcattccatcctccaaaacaagt
gtgccatcagaaaaaccttcgtttatcatgggaggctcaatctcacaaggaacacctggc
acttacttaacatctcatagtcaagcttcctatacccaagaaacggcaaagccatcagtg
ggctctatatctcttgggctgccaaggcagcaggagtcagccaaagctgcttccctgccc
tatatcaaacaagaagaattctctcccagaagtcagaattcccagcctgagggactcctg
gtcagggcacaacatgaaggtgtggttcgaggtaccacaatacaggagggaagtataaca
cgaggaactccaaccaataaagtttctgttgagaccattccttctttgagaggctccata
actcagggtacaccagctctgtcccagtctggcatagcagctgatgcattattgaaggga
actattacccggctagctacagaagacagcagcccagaaaagtgccgggaggaagcttca
gccaaaggccatgttatttatgaaggcaaaagtgggcatattttatcttatgatactatt
aaaaacgttcgtgaaggaacaaggagtccaagaactgctcatgaaattagtttaaaaaga
agttacgatacaatggaaggaaatataaagcaaggaatgtcaatgagggagtctccagtg
tctgcaccactggaaggtttaatctgccgtgcactgcctaggggtagcccacatgctgaa
cttaaagagagaacagtgttgtcgggttctataatgcaaggcacaccaagagcaacatct
gaaagttttgaagaaggcttgaagtaccctaaacagattaagagagagtcacctcctata
aggacatttgaaggagccattactaaagggaaaccatatgatggagtcactactataaaa
gaaatgggtcgttccatccatgaaatcccaagacaggacctgttaagccaggagagtcgc
aagactcctgaaatggtgcagacagccaggccaatcatagaaggctccatatctcagggt
acacccattaaatatgaaagcaattctggccagtctgccatcaaacacaatgtaaaatca
ttaatcactggaccaagtaaactaccccgtggaatgcctcagctggaaatggtgccagaa
aacgtgaaggtggtggagcgaggaaaatatgaagatgtgaagaccggggatgcagtacgt
tcccgtcacacgtcagtagtcagctctggtccctctgttctcaggtcaactcttcatgaa
actcctaaatcacagctgagccctgggatttatgatgataccaatgcacggagaacacct
gtgaactatcagagtccaatgtccaggagttcacctatgatgaatagagttagcgaggct
ggaatatcttctgggaagccagcaaatcatgaaaggaaaaacacacttactccaacacag
agagagagcgtgccagcaaaatctccagtcccaggggttgatcctgtagtggctcacagt
ccttttgaccctcatcatagaggagctactcctgaagtctataggagtcacctccctcct
cacttagatcctgctataccatttcacagggctctggatcctgctgctgctgcttacctg
ttccaaaggcagctctcacctacccctggctacccaagtcagtatcagctttacgcaatg
gagaatacacgacagacaatcctaaatgactacattacctcacagcagatgcaagtcaat
ttacgtcctgatgtaaccagaggattatctcctagagagcaaactttagctctcccatat
gcgggagcaagaggaattattgacctgaacaatatggctcccactatattagtgcctcat
cctggaggaacaagcacaccacccatggagagaattacttacatccctggtactcagctt
acgttccctcccaggccttacaatcctgcttctctgtcaccaggacaccctacacacttg
gcagcttctgcagctgcaaatgctgaaagggaacgggaaagagagagggagaaggaacgg
gagagggagagggaacgagaacgagagcgggaaagagaacgtgaacgagagagggagaga
ataacttcagtccctgctgaactttatcttagaccaggtacagagcagcctggcagacct
ggcagtcatggatatgttcggtccccatccccttcagttagaagccaggaaaacatactg
cagcaaaggcctagtatttttcaaggaaccaacgggacaagtgtaatcacacctttggat
cctgctgctcagctccgtatcatgcagctcacccctggagctccctccataactcaaggg
ttgcctgcttcgcgctacaatactgctgctgatgcccttgcggcgctagtagatgctgca
gcctctgctcctcagatggaagttgccaaagcaaaagagaacaagcatgaaggaaccagg
atagaagagaatatgggacgcaggtcagctgtggttactgagcagccgcagatggaacag
aaaacactggaggtagaaaagaggcctgtccagtgcccctatacatctgcaaatttttct
ggtggcaagtcccaaggacagtcttcatcagtagtctattcagaggctggtaaagaaaaa
ggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagaccacaatt
actgctgctaacttcatagatgtgatcatcactcgacagattgcttcagacaaggatgca
cgagataggggctctcaaagttcagattcttccagtagtttatcttcccaccggtatgaa
gctcctggagatgccattgaggtgattagccctgcaaattcacctgtacctactcaagaa
aagctacagtcctatcaacaagagacacctaaaccaagccaggcagagaatgacccaaac
aggcaatatgaggggccgattcaccgttacaggacacaacaggaacctccttcaccccaa
caacctccacctccttcctcccaagcagaagggatggcacatgtgcccagaacccatcga
cttatcacccttgctgatcacatctgtcaaattattacacaagacttcgctcgaaaccaa
gcagcttctcaggcccctttgcagcctcccaccactacattccagaactccacccctgct
ccagcgcctgtttctacccgagcaaagacatcaaatcgctacagccctgagtcacagttg
cagtctgtccaccatcagcggccaggtgctagagtgtcacctgaaaatctgtctgacaag
tcccggggaagacctggaaaatctccagagaggagtcatgtttcttcagagccctatgag
ccaatctcaccacctcaggtcccagttgtacatgagaaacaggaaaatgttctactgctt
tcccaaagaactgagcctactgaacagaggactgactctcgctctccaggtagcataagc
tacctgccttcttttttcaccaaacttgagaatacgtcaccaatggtaaagtccaagaaa
caggagatatttcgaaagctgaactcgtctggtggaggcgactcagacatggcaactgct
cagccagggactgaaatattcaatttgccagcagtcactacgtcaggtgcagtcagttct
aggggtcattcctttgcagatcctgccagtaatcttggtctagaagacattattaggaag
gcattgatgggaaactttgatgacaagagcgaggatcatggagttgtaatatcacagtcc
attgcagtagcatctggcagttccaacgttgcagtacctgcaagtagtgagacgcgtagg
gaagaagctaatccatcgcctaattcaggagggggagtcagcaagcagaagttaattggc
aaatcaaatagtaggaagtctaagtctccaattccaggacagggatatttaggaactgaa
agaccttcttctgtctcatctgtacattcagaaggggactaccacagacagactccagtg
tgggcctgggaagataggccttcatcaacaggttcaacacagtttccttataacccattg
acaatgaggatgctcagcagtacaccgccaacatcaatcgcgtgtgccccaccgtccatg
agccaagcaaccactcaccaacagaacaggatatgggagcgagagcctgcaccactgctt
tcagcacaatatgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
