Cygnus atratus (black swan): 118255086
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Entry
118255086 CDS
T09349
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118255086 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cata03036
]
118255086 (SUPT6H)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118255086 (SUPT6H)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118255086 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
118255086
NCBI-ProteinID:
XP_050570728
LinkDB
All DBs
Position
20:6847180..6869829
Genome browser
AA seq
1605 aa
AA seq
DB search
MSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDID
DFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEY
EDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRS
IPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQAASSFSRKGPSTIQKIKEA
LNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQA
YQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAA
KAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDSLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAED
EALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFL
YVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSEN
EFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPY
RSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLVDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRKQQ
RTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHV
DVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKK
KLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSY
SYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQW
LQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgatgaggatgatgaggaggaggactatgggaaggaagagcacgagaaggaa
gccattgctgaggaaatctttcaggatggcgaaggcgaggagggaggggaagctgttgaa
gctcctgttgctccaccagaagaagaggaggaggaggaggaagatgaatccgacatcgat
gacttcatcgtcgatgacgatggacaacctctgaagaagcccaaatggcgaaagaagctc
cctggatacaccgatgctgccttgcaggaagcccaggaaatcttcggtgtggacttcgac
tatgatgagtttgagaagtacaacgagtacgatgaagagatggaggaggaatatgaatat
gaggatgaagaggctgaaggggagacccgcgtccgacccaaaaagaccgccaagaagcgc
gtcagtcgccgtagcatctttgagatgtacgagcccagtgagctggagagcagtcacctc
acagaccaggacaacgagatacgcgtgacagacatgcctgagaggttccagttgcgatcc
atcccagtaaagagtgctgaagatgacgagctggaggaagaagctgactggatttacagg
aatgcatttgcaacacccaccatctccttgcaggaaagttctgactaccttgatcgtgga
caagccgccagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaagcc
ctgaatttcatgagaaatcaacactttgaggtcccattcatcgccttctacagaaaggag
tacgtagagccagagctgcacatcaacgacctgtggagagtctggcagtgggatgagaag
tggacccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatgcaagcc
taccagtatgagcaaatatctgctgacccagacaagcctttggctgatggaataagggcc
cttgatactactgacatggagaggctgaaggatgtgcagtccatggacgagctgaaggac
gtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgctgca
aaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaagaaggtgaa
ggagaggatgctgaagatgatgagcagaaagggcctgagctgaagcaggcttcccgtcgg
gatatgtacaccatctgtcaaacagctgggctggacagcctggctaaaaagtttggtctg
acacccgagcagttcggagagaatctccgagacagttaccagcggcacgagacggagcag
ttccctgcagagcccctggagctggccaaggactacgtgtgtagtcagttcccaagtccg
gaagctgtgctggaaggagcccggtacatggtggctttgcagatagccagagagcctttg
gtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttcaccaacc
aaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttgaag
aacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcggaggat
gaggcgctgctgactatagacatcagcattgacatgaaaggagtggagggttacggtagc
gaccagacatacttcgaggaaatcaaacagttctactatcgggatgagttcagccaccag
gtgcaggagtggaatcggcagcgtactatggccattgagcggtccctcaaccagttcctc
tacgtgcagatggctaaagagttgaagaacaagctgttggtggaggccaaggagtatgtc
ctcaaggcttgcagccgcaagctgtacaactggctaaaagtagcctcataccgtcctgat
cagcaagtggaggaagatgatgatttcatggacgaaaaccaagggaaggggattcgggtg
ctaggcattgccttctcctcagccagggaccaccccgtgttctgcgcccttgttaatgga
gagggtgaggttacagacttcctccgattgccacatttcacaaagagaaggaatgcctgg
cgtgaggaagagagagaaaagaaggcacaggatattgaaaccttgaaaaaatttcttttg
aacaagaagcctcacgtggtgacaatcgcaggcgagaacagggatgctcagatgctgatg
gaggatgtaaagagaattgttcatgagctggatcaggggcagcagctgtcctctatagga
gtggagctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaat
gagttccgggattacccacctctgctgcgtcaagcagtctcccttgctcgtcgcattcag
gatcctctcatagagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaa
ctccaccctctgcaggagcacgtggtgaaggaggaactgctgaatgccctctactgcgaa
ttcataaaccgtgtgaacgaggtgggagtggatgtcaatcgggcaattgctcaccctcac
agccaggctttgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctgcta
aagatcttaaaacaaaacaacacacgcctggagaacaggacccagctggttacgatgtgt
cacatgggacccaaggtgtttatcaactgtgctggcttcatcaaaattgacacagcgtcg
ctgggcgatagtactgattcctacatcgaagtcctagatggttccagagtccatcctgaa
acctacgaatgggcaagaaaaatggcagtagatgccttagaatatgatgagtcagctgag
gatgctaatcctgcaggagctctagaggagatcttagaaaaccccgagcgactgaaagac
ctggatcttgatgcctttgctgaagaactggaaagacagggctacggtgacaagcatatc
actttgtatgacattcgagctgaactgagctgcaggtacaaggacctgagaacaccatac
cgttctccaaacacagaagaggtcttcaacatgctgaccaaagaaactccagagactttt
tatataggtaaaatgatcatctgcaacgtgaccgggatagcccacaggcgaccacaagga
gaaagctacgaccaggcaatacggaacgatgaaactggcctatggcagtgtcctttctgt
cagcaggataacttcccagagctcagtgaggtttggaatcactttgacagcggttcctgc
ccaggtcaggccattggagtgaagacacgtctggataatggcgttgctggcttcatccca
acaaaatttcttagtgataaggtggtcaaacggccagaagaaagggtgaaggtgggaatg
actgttcactgcaggattatgaagatcgacattgagaagttcagtgcagatctgacctgc
aggacttctgacttggtggataagaacaatgagtggaaactgcctaaagacacctactat
gactttgactctgaggcagcagatcacaaacaggaagaagacctgaaaagaaagcagcag
cgaacaacgtacatcaagagagtaattgctcacccgtcattccacaacattagcttcaag
caagctgagaagatgatggagaccatggaccaaggggacgtgattattcggccaagcagc
aaaggggagaaccaccttactgtcacctggaaggtgaacgatgggatttaccagcacgtg
gatgtccgagaagagggcaaggagaacgctttcagtctgggctccacgctttggattaac
acggaggagtttgaagacctggatgaaattgtcgctcgctatgtccagcctatggcttct
tttgccagagacctgttgaatcacaaatactatcaggattgcaacggtggagacaagaag
aagctggaagagctgctgataaagaccaagaaagagaagccaacatttattccctacttt
atcagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcgaggcaaa
ccaaggatagagtatgtgacggtcacaccagaaggattccgctaccggggccagatcttc
cctactgtgaacggactcttccgatggtttaaggatcattatcaggaccctgttccaggt
attacccccagcagtagcagtcggaccaggactccagcctccattaacgctactccagct
aacattaacctggcagacctgacccgtgcagtgaacgccctcccgcagaacatgacctcc
cagatgttcagtgccatcgctgccgtgacgggccaggggcagaacccaaatgccacccct
gcacagtgggcatccagtcagtatggctacgggggcagcggaggtggcagcagcgcgtac
catgtcttcacgactccagcacagcaaccagtggccacccctctgatgacccccagttac
tcctacactacccccagccagccgatcacgaccccccagtaccagctgcaggccaacacc
acaccccagtccacccagtcccagacacagtcgcagccatcgtccagctccaggcagagg
cagcagccaaagaccaacagccacgctgcgatcgactgggggaagatggccgagcagtgg
ctccaggagaaggaggctgaacggaggaaacagaagcagaggttgactcctcgcccgtcc
cccagccccatgatcgagagcacgcccatgtccatcgccggggacgccacgcccctgctc
gacgagatggaccgatag
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integrated database retrieval system
