Cygnus atratus (black swan): 118255117
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Entry
118255117 CDS
T09349
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118255117 (MED13)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
118255117 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
118255117
NCBI-ProteinID:
XP_035416972
LinkDB
All DBs
Position
20:8845697..8904208
Genome browser
AA seq
2176 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEDMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSTVGASH
CSTTCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCDEETADKVASWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGQQQQAAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEADSASQRLVMTAPDSQVRFSNIRTNDVAKTPQMHNAEMANSPQPPPLSPHP
CDVVDEGVTKAPSPQHFYQMPTPDPLVPTKTMEDRLDGLSQPFPAQFPEVIEPTMYVGTA
VNLEEDEADTTWKYYKVPKKKDVEFLPPQLPSDKLRDDAVIPTEQENITSVTELMVQCRK
PLKVSDELVQQYQSKNQYLAAVVSEADQEPEIDPYAFVDGDVEFLFPDSKKDRQNIEREA
GKKHKAEDGASSVTVLSHEGEDAMSLFSPSVKQDAQRIAAHARTASTSLFHETDLVVSYT
DLDNLFNSDEDELTPGSKRTVNGADDKSNCKEAKAGNLDPLSCISTADLHKMYPTPPSLE
QHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSSVGAQFRIEVDEGFCSPKPAEIKDYSY
VYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLDLLPPGPAMPFIK
DGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPRTP
RGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESV
MNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSSGLF
LEDELDILGRNTECGKEAEKRFEALRATSVEHGSGGLKEPEKLPDELILLLQDQCTNLFS
PFGAADQDPIPKVSAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKTTCL
HHWSKRNVLDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKMAGR
GSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCPENE
ALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFSQTA
NANNEAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLIPPPSQPASALPPATANAGN
PNTPSSAPGAPTSSTMTATSTSAMSSAATTANSTLTTTATSSSSANIGSGIPTNKPSSFP
PFSSMNNTTSASLPAQAATVQNGQTGGQQQQPTLQAAGMSADSTSAPAQPHPEVSESTMD
RDKVGVPTDGDSHAITYPPAIVVYIVDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQVLP
PNIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGF
GPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSH
DQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSSLPW
RVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAME
PQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASSTYTT
ENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGGDMG
KGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKA
SLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPI
HFVVLNQLYNFIMNML
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgatacgtatggcagggtccaacgtct
gccccaattctcttcccggtcacggaagaggaccctattttgagcagcttcagtcgctgt
ctgaaggcggatgtactcagtgtttggcgtcgagaccagagacctggacgcagggagcta
tggatattttggtggggtgatgaccccaactttgctgacctaattcatcatgatctctca
gaagaggaagatggtgtttgggagaatggactttcttatgaatgtcgcactctgcttttc
aaagccgttcacaacctgttggagaggtgtttaatgaatcggaattttgtgcgcattggg
aaatggtttgtgaagccctatgagaaagatgaaaaacctataaacaaaagtgagcacttg
tcctgctcgttcacctttttcttacatggggatagcaatgtttgtaccagtgtggagatc
agtcagcatcaacctgtgtacctgcttagtgaagaacacctcacccttgcccagcagtct
aacagcccttttcaagttattctaagtccctttggattaaatggcacactcacagggcag
tcattcaagctttctgattcatcgacaaaaaagcttattggtgaatggaaacaattctat
cctgtcacatctaacttgaaggaggggtctgaggaaaagcaagaagacatggattgggaa
gatgattctttagctgctgtcgaagtccttgttgctggtgtgcgaatggtgtatccagcg
tgctttgttctagttcctcagacagacatccctgctcctagtactgttggggcgtctcac
tgttcaactacttgcttgggtgtccaccaagtgcctgcttccacaagagatcctgcgatg
tcttcagtaactctaactccaccgacatccccagaggaagttcaaacagttgatgctcag
tctgcccagaaatgggtgaagttttcctcagtttctgatggatttatctctgacagtact
agccatcatggtggcaaaatacctagaaaactagctaatcaagtggtggacagagtttgg
caagaatgcaatatgaacagagcacagaacaagcggaaatattctgctacatcgaatggc
ttgtgtgatgaagagacagctgacaaggtagcatcctgggattttgttgaagccacgcag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcagcag
gggcaggcaccacctgtgggccagcaacagcaagcagctccaaagcacaagacaaatgag
aagcaagacaaaggggataagccacaaaaacgccctttgactccttttcatcatcgtgta
tctatcagtgatgatgttgccatggaggcagattcagcaagtcagaggcttgtgatgact
gcaccagacagtcaagtgagattttcaaatatccgaactaatgatgtagcaaagactcct
cagatgcataatgctgaaatggcaaattcacctcaaccaccaccgcttagtcctcacccg
tgtgatgtagttgatgaaggggtaactaaagctccttctcctcaacatttctaccagatg
ccaacgccagatcccttggttcccacaaaaacaatggaagacagacttgatggcttatct
cagccttttccagctcaatttccagaagttatagagcctacaatgtatgttggtactgca
gtgaatttggaggaagatgaagcagatactacttggaagtattataaagttccaaagaaa
aaggacgtggaattcttaccacctcagcttccaagtgataaattgagagatgatgcagta
atacctactgaacaggaaaacataacatcagttacagaattaatggtgcaatgtaggaag
cctttaaaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaatacctagca
gcagtagtgtcagaagctgaccaggaacctgaaattgatccttatgcctttgttgatggc
gatgtggaattcttatttcccgatagtaaaaaagatcggcagaacatcgagagggaagct
gggaagaaacacaaggctgaggatggtgcatccagtgttacagttttatctcatgaagga
gaggacgctatgtctctgtttagtccttctgtcaagcaagatgcccaacgtattgctgct
catgctcgcactgcatcaactagcctgttccatgaaacagacttggtggtctcctatact
gaccttgacaatctcttcaattctgatgaggatgaactaacccctggatctaaaagaaca
gtgaatggtgctgatgacaaatccaactgcaaagaggcaaaagcaggaaatttagacccg
ctgtcatgcataagcactgcagatctccataaaatgtatccaactccaccttcattggaa
cagcatattatgggattttcaccaatgaacatgaataataaggagtatggcagcatggac
actacacttggaggaacagtacttgaagggaatagctctagtgtgggagctcagttcaga
attgaagtagatgagggtttctgcagccccaaacctgctgaaataaaggattattcttat
gtttataaacctgagaactgccaagccttagtgggatgttccatgtttgcaccactgaag
acacttcccagccagtgtctccctcccatcaagctgccagaagaatgcatttatcgccag
agttggactgtgggaaagttggatttacttcctccaggacctgccatgccattcatcaaa
gatggtgatggaagcactatggatcaagagtacggccctgcatacacaccacaaactcat
actccgtttgggatgccaccaagtagcgcaccacccagcaacagtggagctggaattctc
ccttctccttccacccctcgtttcccaactcctagaacaccaaggactcctcggacacct
cgtggagctggtggaccggcaagtgcacagggttcagtcaagtacgagaactctgattta
tactcaccagcttccacaccatcaacatgtagaccgcttaattctgttgaacctgcaact
gtgccttccattccagaggcacacagtctttatgtgaatctcatcctttcggagtctgta
atgaatctcttcaaagactgtaactttgacagctgctgcatatgtgtttgcaatatgaac
atcaaaggtgctgatgttggagtttacattcccgatccaacgcaagaggcccagtatagg
tgtacctgtggtttcagtgctgttatgaatagaaaatttggcaacagttctggactgttt
cttgaagatgaattggatattttaggacgtaatacagagtgtggcaaggaagcagaaaaa
cgctttgaagctctcagagctacttctgttgaacatggcagtggaggactgaaagaacct
gagaaactgcctgatgagttaatactgttgctgcaagatcaatgcaccaacttgttctca
ccatttggagcagcagatcaagatcctatccccaaagtcagtgcagttagcaacctggta
cgtgtagaagaaagggattgttgcaatgactgctacttagccttggaacatggacgccag
ttcatggacaatatgtcaggaggaaaagttgatgaagcacttgtgaaaacgacttgcttg
caccactggtcaaaaagaaatgttttggatgtgagcatgcagtgttcccaggacatcctg
cgcatgctcctctcgctccagccagttcttcaggatgcaattcagaagaagcgaacagtc
cgatcttggggtgtgcaaggccctctcacgtggcaacagtttcacaaaatggctggcaga
ggctcttacggaactgatgagtccccagaaccactgccaatcccaacatttttgttgggc
tacgattatgattttctggtgctgtctccatttgcattgccgtactgggagaggctgatg
ttggaaccttatggatctcagagagatgttgcttatgttgtggtgtgtcctgagaatgag
gctctgctaaatggagcaaaaagcttctttagggatctgactgcaatatacgagtcatgc
agactgggtcagcataggcctatctgtaaattactgcctgatggaatcatgcgagttgga
cctactgcttcaaagaaactttctgagaagttggtcacagaatggttctcacagacagct
aatgccaacaatgaagcattttccaaactgaaattatacgcccaagtttgcagatatgaa
ctaggtccttatcttgcttctcagcctttggacaattctttactttctcaaacaaatctg
atccctcccccaagccagccagcctctgctctgcccccagcgacagctaatgctggaaat
cccaacactccatcatctgctcctggagctcccaccagtagtactatgacagcaacatca
actagtgccatgtcttctgcagctactacagctaattcaactttgacgaccactgccacg
tcatcctcttctgctaatataggcagtgggataccaacaaacaagccttcttcatttcca
ccttttagcagtatgaacaataccacttctgcttccctgcctgctcaggctgcaacagtc
caaaatgggcaaacaggaggacagcagcaacagccgacacttcaagcagcagggatgtct
gcagatagtacttcagcacctgcacagccccatccagaggtttctgaaagcactatggat
cgagataaagttggagtccctacagatggagattcacacgctatcacctatccacctgca
atcgtagtttacatagttgatccttttacgtatgaaaaaaaggatgagaacagtagctcg
tctagcttgtggacgcttggacttctgcgctgctttttagagatggttcaggttcttcct
cccaacatcaagaatataatttctgtgcagattgtcccatgtcagtaccttctgcagccc
gtgaaacatgaagaccggcagatttatactcagcatttaaaatctttggcattttcagca
tttactcagtgtcggagacctcttccaacttccaccaatgtgaaaacgttaactggcttt
ggtccaggtttagctatggaaactgctcttaagagccccgatagacctgagtgtattcga
ctctacacccctccttttatattggctcctgtaaaagacaagcaaacagaactaggagaa
acttttggagaagctggccagaagtataacgtactttttgtaggctactgtttgtctcat
gatcaaagatggcttcttgcatcctgtacagatctctatggagaacagctagagacttgc
ataattaatattgatgtaccaaacagagctcgcaggaaaaagggctctgcccgcagactt
ggtcttcagaaactctgggagtggtgcttaggacttgtacagatgagctctttgccttgg
agagttgtaataggacgtttaggaagaataggacatggggaattgaaagattggagttgt
ttgctgagtcgccgaaatcttcagtccctcagtaagagactaaaagacatgtgcagaatg
tgtggcatctctgccgcagactctcccagcattctcagtgcttgtttggtggcaatggaa
ccacaggggtccttcatcataatgccagattctgtatcgactggctctgtatttggacgc
agcaccactttaaatatgcagacatctcagctgaataccccacaggacacgtcgtgcact
catatacttgtgtttcccacatctgcttctgtgcaagtagcatcgtcaacttataccact
gaaaacttggatctggccttcaacacaaacaatgatggagcagatggaatggggatcttt
gacctgttagacactggagatgatctcgatcctgatattataaatatacttcctgcatcc
cctactggatcccctgtacattctccagggtcccactacccccatggaggtgatatgggc
aagggtcaaggtacagatcgattgctttcaacggaatctcatgatgaagtaacaaatata
ctgcaacagccactggccctcggttattttgtgtcaactgccaaagcaggtccattgcct
gactggttttggtcagcatgtcctcaagcacaaaatcagtgtcccttgtttcttaaggcc
tctttgcacctccatgtgccttcagtgcaatcagacgagctactccacagtaaacactcc
catccacttgattctaatcaaacttctgatgtgctcaggtttgttctggaacagtacaat
gcactctcctggctaacctgtgatcctgcaacccaggacagacggtcatgtctcccaatt
cattttgtggtgctgaatcagttgtataactttatcatgaatatgctgtga
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