Cygnus atratus (black swan): 118255238
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Entry
118255238 CDS
T09349
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118255238 (TBC1D4)
Membrane trafficking [BR:
cata04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118255238 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118255238 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
118255238 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
Laminin_I
DUF4249
Anillin_N
Motif
Other DBs
NCBI-GeneID:
118255238
NCBI-ProteinID:
XP_035417182
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All DBs
Position
1:164726817..164836263
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AA seq
1278 aa
AA seq
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MEKPPGVQPLSHPLQPSAEPQPAAEKRFRLWYVGWSCLDRRTTLPMLPWLMAEIRRRGQR
QEPGGSLGSGVPAREVLLQLGSPTLRCVPAGPPSPGPGRPGSPAPAVFIFEHKAQHIARF
VHNSHDLTYFAYLIKAQPDNPDSPMACHVFRATDPNQVPDVISSIRQVSKAALKEDAKPS
KDSEDAFYNSQKFEVLYCGKVTVAHKKAPSSLIDDCIEKFSLHERQRLKLLNEQRNNESS
LDLPLCEGNVPSSPLDSPFEELESPNNTTEHAAMFTIGSQTNLTNLASTRSSFPERILED
SGFDEQQEFRSRCSSVTAVMQRRVHDANLKIQPRRRHASAPSHVQPSDSEKNRTMLFQVG
RFEVNLISPDTKSVVLEKNFKDISSCSQGIKHVDHFGFICRESVEPGLSQYVCYVFQCAS
ESLVDEVMLTLKQAFSTAAALQNAKTQVKLCEACPMHSLHKLCERIEGLYPPRAKLVIQR
HLSSLTDNEQADIFERVQKMKPDNDQEENELVILHLRQLCETKQKTHIHIGEAPSITSNS
AIPENTTSGGRFKLDILKNKAKKSLTSSLENIFSRGANRMRGRLGSVDSFERCNSLASDK
DASPSDSPPATPPASPVSSAWQPFPEEDSDSPQFRRRAHTFSHPPSSARRRITFQNGRSQ
SARSPLLRQSCVEPPSPIVGVRRFFSESESTSPGLPSSVSAPSFLKTLYQGSGRLLQHSE
NDLSKSDGEGKKRTSTVCSSESLNAVGATLTPRRISWRQRIFLRVASPMNKSPSKMQRPD
GHDGSELLPLSPLAPPLEEDPLILALQNEDGTDKIGEKKNSEELQSLWRKAIHQQILLLR
MEKENQKLEASRDELQSRKVKLDYDEVGTCQKDVINVWDKKLINCRAKIRCDMEDIHGTL
KEGVPKSRRGEIWQFLAVQHRVRHRLPNKQQPPDVSYKELLKQLTAQQHAILVDLGRTFP
THPYFSTQLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLM
YDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQ
FPLGFVARVFDVIFLQGTEVIFKVALSLLSSQETSIMGCESFENIVDFLKTTIPDMTQPQ
MEKIITQVFEMDISKQLHAYEVEYHVLQDELQENVNPCDEGEPLEKLERANSHLKRQNMD
LLEKLQVAHAKIQSLESSLETILTRESKMKTVIQSLEQEKITYQKTLEQIMKYLPAEALS
DCELLLKEVNYNPNNKTK
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcccccgggggtccagcctctctcccaccccctgcagccctcggccgagccg
cagccggcggcggagaagcgcttcaggctgtggtacgtgggctggtcgtgcctggaccgg
cgcaccacgctgcccatgctgccctggctgatggccgagatccggcgccgcgggcagcgg
caggaacccggcggctccctgggcagcggcgtgccggcccgagaggtgctgctgcagctg
gggtcccccacgctgcgctgcgtccccgccgggccccccagccccggccccgggcgcccc
ggcagccccgcgcccgccgtcttcatcttcgagcacaaggcgcagcacatcgcccgcttc
gtccacaacagccacgacctcacctacttcgcctacctgatcaaggcacagcccgacaac
cccgactcccccatggcctgccacgtcttccgagccaccgaccccaaccaggttcctgat
gtcatcagcagcataagacaagtctccaaagcagcactgaaagaagatgccaaaccaagt
aaagatagtgaagatgccttctataactctcaaaaatttgaggtcttgtactgtggaaag
gtgacggtggctcacaagaaggctccctcgtcattaattgatgattgcattgagaaattc
agccttcatgagcgtcagcgcctgaaactattaaatgaacagcggaataatgagtcaagt
ttggacttacccctgtgtgaaggaaatgtgccatcttctccattggatagcccatttgag
gagctggagagcccaaataacaccacagaacatgccgcgatgtttacaattggcagccag
accaacttgaccaacctggccagcacacgtagctcatttccagagcgaattttagaggac
tctggctttgatgagcagcaggagtttcgttcccggtgcagcagtgtcactgcagttatg
caaagaagggttcacgatgcaaacctgaaaatacagccacgcagaagacatgcaagtgca
cccagtcatgttcagccctccgattctgagaagaacaggacaatgttgtttcaggttgga
agatttgaagttaacctcatcagtccagacaccaaatctgttgtgcttgaaaagaatttt
aaagatatctcctcatgttctcagggtataaaacatgttgatcactttggcttcatttgc
cgggaatctgttgaacctgggttaagccagtatgtttgctacgtgttccagtgtgcaagt
gagtctctggttgatgaggtaatgcttaccctgaaacaagcctttagcaccgctgcagct
cttcaaaatgccaagacacaggttaaactgtgtgaggcctgcccaatgcattcattgcac
aaactttgtgaaagaatcgaagggctttatccaccaagagccaagctagtaatccagaga
catctgtcatcactaactgataatgagcaagcagacatttttgaacgtgttcagaaaatg
aagcctgacaatgaccaggaagaaaatgaacttgtgatcctacatctacgccaactctgt
gaaactaagcagaaaacacacattcacattggtgaagcaccgtcgattacttctaacagt
gcaattccagaaaacaccaccagtggtggcaggtttaagcttgacattctgaaaaacaag
gccaagaaatccttgactagctccctggaaaatatcttctcaaggggagccaacagaatg
agaggccgcctgggaagtgtggacagctttgagcgctgcaacagccttgcttctgacaaa
gacgcttcaccgagtgattctccaccggccactcctccggcatcacccgtgtcctcggcc
tggcagccgtttcctgaagaggactcagactccccccagttcaggaggcgcgcacacacc
ttcagccacccgccctccagcgcccggcggaggataaccttccagaacgggaggtcccag
agtgcccggtccccgctcctgcggcagagctgcgtcgagccgccgagcccaattgttggg
gttcgacgctttttcagtgagagtgaatctacatcacctggtctcccttcctctgtctct
gccccttctttcttgaaaaccctttaccagggctcaggaaggttactccagcactctgaa
aatgacctctccaagagtgatggtgagggaaagaaaagaacatcaactgtctgcagcagc
gaatctctaaatgctgtgggggccacgctcacacctcgccgcatctcctggcggcagaga
atattcttgcgggtagcttcacctatgaacaaatctccttcgaaaatgcagcgtccagat
ggtcacgacggaagtgaattgttaccattatcccctcttgctccacccttggaggaggac
cctcttattttagcattgcaaaatgaggatggtacagataaaattggagagaagaaaaac
tcagaagagctacaaagtctgtggagaaaagccatccatcaacaaattctattgcttcga
atggagaaagaaaaccagaagctggaagcaagcagagatgagctccaatcaagaaaagtc
aaactggactacgatgaagttggtacatgtcagaaagatgtcataaatgtttgggataag
aagttaattaactgcagagccaaaattcgatgtgacatggaagatattcatggcactttg
aaagaaggtgtaccaaaaagtcgtcggggagaaatttggcaatttttggctgtgcaacat
cgagtcagacacagattgccaaacaagcagcagcctcctgatgtctcttacaaagaactt
ctgaaacaactgacggcacagcagcacgccatccttgtggatctaggacgaacattccct
acacatccttacttttctacccagctgggagcaggacagctatcgctctttaatctcctg
aaagcatactctttgctggacaaggaagtgggttattgtcaaggtataagctttgtagct
ggagtgctgcttctacacatgagtgaggagcaggcctttgaaatgctgaagttcctcatg
tatgaccttggcttccgtaaacaatacaggccagacatgatgtcactacagattcagatg
tatcagctgtcaaggcttcttcatgattatcacagagacctctataatcatcttgaagaa
aatgaaatcagccccagtctttatgctgcaccatggtttcttacactgtttgcatcccag
tttccattaggatttgtagccagagtatttgacgttatttttcttcaaggaacagaagtc
atatttaaagtagcactgagcctacttagcagtcaagagacgtctataatgggatgtgag
agttttgagaatattgttgattttcttaagaccactattccagacatgactcagcctcaa
atggaaaaaattattacccaggtgtttgagatggatatttcaaaacagctccatgcctat
gaagtagagtaccatgttctgcaggatgaactccaggaaaatgtgaatccctgtgatgaa
ggtgaacctctggagaagctggagagggcaaacagccatctgaaaaggcaaaacatggat
ttgttggagaagctacaggttgctcatgctaaaattcagagtctggaatccagcctggag
actattttgactcgagagagcaaaatgaagactgtaattcagtccctggaacaggagaag
ataacatatcaaaagactcttgagcagataatgaaatatttgccagcagaagcattgtct
gactgtgagctactcctgaaggaagtaaactacaatccaaataataaaacaaaatga
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integrated database retrieval system
