KEGG   Cygnus atratus (black swan): 118255334
Entry
118255334         CDS       T09349                                 
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cata03000]
    118255334 (SOX13)
Transcription factors [BR:cata03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    118255334 (SOX13)
SSDB
Motif
Pfam: HMG_box HMG_WDHD1 HMG_box_2 CC_Bre1 DUF6586
Other DBs
NCBI-GeneID: 118255334
NCBI-ProteinID: XP_035417327
LinkDB
Position
24:complement(3190063..3196641)
AA seq 611 aa
MSMRSPVSPHLELDGAGSMVNCTIKTEEKKEGGYESPPGAAPSAEPRPSDPPGPPPREAT
DPQALPQESHSPASDVLEPRRSAFEPAVSSQEKLDFNKNLKEVMPTIEKLLSSDWKERLL
GRNAAETKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPLPVTQDPQIA
LPIQPIPCKPVDYPVQLLHSPPPPTLKRPSGSSHLQMQETSQPLNLTAKPKGSELPSASS
SPSLKMSSCQSHTPSHGAARDLQTSPSNLPLGFLGEGDAITKAIQDARQLLHGHGGAMEG
ALSHPYRKDHVSIDTSPVKERLEEAPAHRLDEALLTCEMDGSRHFPESRNNNHIKRPMNA
FMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPD
YKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQMPPASSDVLYPRPV
GMQLTPPLMEHYLPRSMDPNMPVIVNTRSLKEGDGGDDGHSVADGEMYRYSEDEDSEGED
KSDGELVVLTD
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgtccatgaggagccccgtttctccccacctggagctcgatggggcgggcagcatggtg
aactgcaccatcaagacggaggagaagaaggagggcggctacgagtccccgccaggggct
gcccccagtgccgagccccgtcccagtgaccccccgggaccaccgccgagggaggccacg
gacccccaggccctgccgcaggagtcccactcgcctgccagtgatgtgctggagccccgg
cgctcggccttcgagccggctgtcagcagccaggagaagctggacttcaacaagaactta
aaagaggtgatgccaaccatcgagaaattgctgtccagcgactggaaggagcggctgctg
ggccgaaatgctgccgaaaccaaagaagtgaagggaacccaggagagcctggcggagaag
gagctccagctcctcgtcatgatcaaccagctgtccacgctgcgggaccagctcctgacg
gcgcactcggagcagaagaacatggccgcgatgctcttcgagaagcagcagcagcagatg
gagctggcgcggcagcagcaggagcagatcgcgaagcagcagcagcagctcatccagcag
cagcacaaaatcaacctgctgcagcaacagatccagcaggtcaacatgccgtacgtcatg
atccccgccttcacccccagccaccagcctctccccgtgacgcaggacccccagatagcg
ctgcccatccagcccatcccttgcaaaccagtggattaccccgtgcagctgctgcacagc
ccccctcctcccacgctgaagagacccagcggctcgagccacctccagatgcaggagacc
tcgcagccgctgaacctgacggccaaacccaaaggctccgagcttcccagtgcctccagc
tcgcccagtttgaagatgagcagctgccaatcccacacgccgagccacggggccgcgagg
gacctgcagaccagtccgtccaacctgcctctgggcttcctgggtgaaggcgatgccatc
accaaagccatccaggacgcgcggcagctgctgcatggccacggcggggccatggagggc
gcgctgagccacccctaccgcaaggatcacgtcagcattgacacttccccggtgaaggag
cggctggaggaggcccccgcgcaccgcctggacgaggcgctgctgacctgcgagatggac
ggctcgcggcacttccccgagtccaggaacaacaaccacatcaagcggcccatgaacgcc
ttcatggtgtgggcgaaggacgagaggaggaagatcttgcaagccttcccggacatgcac
aactccagcatcagcaagatcctgggctcccgctggaaatccatgacgaaccaggagaag
cagccctactacgaggagcaagcccggctgagccggcagcacctggagaagtaccccgac
tacaagtacaagccccggcccaagcgcacgtgcatcgtggaggggaagcggctgcgcgtg
ggcgagtacaaggcgctgatgcggaaccggcggcaggacgcgcggcagggctacttgata
gggccccagggcagccagatgccccccgcctcctcggacgtgctgtacccgcggccggtg
ggcatgcagctaacgccccccctgatggagcactacctgccccgcagcatggaccccaac
atgcccgtcatcgtcaacacgcgcagcctcaaggaaggcgacggcggggacgacgggcac
tcggtggccgacggcgagatgtaccgctacagcgaggacgaggactcggagggcgaggac
aagagcgatggcgagctggtggtgctgacggactga

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