KEGG   Cygnus atratus (black swan): 118255647
Entry
118255647         CDS       T09349                                 
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cata03019]
    118255647 (ZC3H12A)
Messenger RNA biogenesis [BR:cata03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     118255647 (ZC3H12A)
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_2 zf-CCCH_4 zf-CCCH
Other DBs
NCBI-GeneID: 118255647
NCBI-ProteinID: XP_035417882
LinkDB
Position
23:3002946..3014430
AA seq 677 aa
MSAGSISSLLGCPGWREAFPVGRQQVSRLDERMSSRDPCESGYLSLGVPLPARAVSREEG
GQPAMLGAEPPEAAGSPTQEPPDSLEMQLKVDFFRKLGYSSEEIYIVLQKLGLSADTNTV
LGELVKHGPAERDPMETPQETKEAPLVPRGGAANKTPAPMPTPEEKESDNLKPIVIDGSN
VAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLITDQYILRDLEK
KKILVFTPSRRVGGKRIVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERPEWKKFIEERL
LMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIKCKFYHPE
RINQPQRSLADELRANARLSPTRSTSAVKEEKKGKRSSQAESDKSSLQKVSAERKSLTHK
TKPGDVPLQVKGCVSGSVPPTSGSHRSSERYQHPHMDSLPYISQEHLDSGIGSLENQMSD
MWPYRSTSHCDHSHAEQVAVCTCSRQRSVYPHSSSLEQNGLVPYKHGSHKSSASGASFLQ
YNPEISHSGPPHSFSGYGVPIHPTNAGQYSLPNEYNAPPSHSREYWSEPYQMPPPQVRST
SVQDPRSVQRAPGPTYGDSCQWVSDQFVEERANVHVKLCGIFHPHLVDAVMSRFPLLLDP
QRLAAEILTYKSQNPGI
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgagtgcaggcagcatctcctccctgctgggctgccccggttggcgtgaggcgttcccg
gtgggcagacagcaggtctctcggctggatgagaggatgagctccagagatccgtgtgag
agcgggtacctcagcctgggcgtcccgctgcctgcccgggctgtgagtcgtgaggaggga
ggccagcccgccatgctgggcgcagagcctcccgaggcagcggggagccccacgcaggag
ccccccgacagcctggagatgcagctgaaggtggacttcttccgcaagctgggctactcc
tcggaggagatctacattgtcctccagaagcttggcctcagtgctgacaccaacactgtc
cttggggagctggtgaagcatggcccggctgagcgggaccctatggagaccccgcaggag
accaaggaggctcctctggtccctcggggaggagctgccaacaagacccctgcacccatg
ccgactccagaggagaaggagagtgataacctgaagcccattgttattgatggaagcaat
gtggcaatgagccatgggaataaagaagtgttctcctgcagaggtatcctgctggctgtg
cagtggttctgggacaggggccacaaggatatcacagtctttgtgccgtcttggaggaag
gagcagccacgaccagatgtacttataacagaccagtacattctccgtgaccttgaaaag
aagaaaattctggtcttcactccttccaggcgggttggaggcaagcgtattgtctgttat
gatgatcggttcattgtgaaactggcacacgagtctgatggcattgtggtttccaacgat
acttatcgggacctgcagaatgagcgtcctgagtggaagaaattcatcgaggagcgtctg
ctgatgtattcctttgtaaatgacaagtttatgcctccagatgatcccctaggacgacat
ggccccagcctggataacttcctgagaaaaaaacctgtggtgccagaacacaagaagcag
cagtgcccttatgggaagaaatgcacttatggaattaagtgtaaattctaccaccctgaa
aggatcaatcaaccccagcgctcgttagctgatgaactccgagccaatgcaaggctgtct
cctaccagaagtaccagtgctgtcaaggaggagaaaaagggcaaaagaagttcccaggca
gagagtgataaaagctctttgcagaaggtctctgcagagaggaaaagcttgacccataaa
acaaagcccggtgatgttccacttcaggtcaaaggctgtgtgtcaggcagtgttcctcct
accagtgggagccataggtcctctgaaaggtaccagcatcctcacatggactctctgcct
tatatctctcaggagcatcttgactcaggcattgggtctctggagaaccaaatgtctgac
atgtggccttacagatctaccagtcactgtgatcactcccatgctgagcaggtggcagtc
tgcacctgcagtaggcagagatctgtctacccacactcttccagcttagagcaaaatggt
ctggtcccttataagcatggttcccataaatcttctgcctctggtgctagcttcttgcag
tataaccctgagatatctcactcagggccacctcactctttctcaggctatggagtaccc
atacacccaactaatgcagggcagtacagcctgcccaatgagtataacgcccctccgtct
cattctcgtgagtactggtctgaaccataccagatgcctcctcctcaggtgagatctacc
agtgtgcaagatcctcggtcagtgcagagagccccggggccaacatacggggactcctgc
cagtgggtgtctgaccagtttgtagaggagagggccaacgtgcatgtcaagctgtgtggc
atatttcatccccatttagtcgatgctgtgatgagccgtttccctctgcttttggatccc
caaaggctagctgcagagatactaacatacaagtctcagaatccaggtatatga

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