Cygnus atratus (black swan): 118255647
Help
Entry
118255647 CDS
T09349
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118255647 (ZC3H12A)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118255647 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
118255647
NCBI-ProteinID:
XP_035417882
LinkDB
All DBs
Position
23:3002946..3014430
Genome browser
AA seq
677 aa
AA seq
DB search
MSAGSISSLLGCPGWREAFPVGRQQVSRLDERMSSRDPCESGYLSLGVPLPARAVSREEG
GQPAMLGAEPPEAAGSPTQEPPDSLEMQLKVDFFRKLGYSSEEIYIVLQKLGLSADTNTV
LGELVKHGPAERDPMETPQETKEAPLVPRGGAANKTPAPMPTPEEKESDNLKPIVIDGSN
VAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLITDQYILRDLEK
KKILVFTPSRRVGGKRIVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERPEWKKFIEERL
LMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIKCKFYHPE
RINQPQRSLADELRANARLSPTRSTSAVKEEKKGKRSSQAESDKSSLQKVSAERKSLTHK
TKPGDVPLQVKGCVSGSVPPTSGSHRSSERYQHPHMDSLPYISQEHLDSGIGSLENQMSD
MWPYRSTSHCDHSHAEQVAVCTCSRQRSVYPHSSSLEQNGLVPYKHGSHKSSASGASFLQ
YNPEISHSGPPHSFSGYGVPIHPTNAGQYSLPNEYNAPPSHSREYWSEPYQMPPPQVRST
SVQDPRSVQRAPGPTYGDSCQWVSDQFVEERANVHVKLCGIFHPHLVDAVMSRFPLLLDP
QRLAAEILTYKSQNPGI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaggcagcatctcctccctgctgggctgccccggttggcgtgaggcgttcccg
gtgggcagacagcaggtctctcggctggatgagaggatgagctccagagatccgtgtgag
agcgggtacctcagcctgggcgtcccgctgcctgcccgggctgtgagtcgtgaggaggga
ggccagcccgccatgctgggcgcagagcctcccgaggcagcggggagccccacgcaggag
ccccccgacagcctggagatgcagctgaaggtggacttcttccgcaagctgggctactcc
tcggaggagatctacattgtcctccagaagcttggcctcagtgctgacaccaacactgtc
cttggggagctggtgaagcatggcccggctgagcgggaccctatggagaccccgcaggag
accaaggaggctcctctggtccctcggggaggagctgccaacaagacccctgcacccatg
ccgactccagaggagaaggagagtgataacctgaagcccattgttattgatggaagcaat
gtggcaatgagccatgggaataaagaagtgttctcctgcagaggtatcctgctggctgtg
cagtggttctgggacaggggccacaaggatatcacagtctttgtgccgtcttggaggaag
gagcagccacgaccagatgtacttataacagaccagtacattctccgtgaccttgaaaag
aagaaaattctggtcttcactccttccaggcgggttggaggcaagcgtattgtctgttat
gatgatcggttcattgtgaaactggcacacgagtctgatggcattgtggtttccaacgat
acttatcgggacctgcagaatgagcgtcctgagtggaagaaattcatcgaggagcgtctg
ctgatgtattcctttgtaaatgacaagtttatgcctccagatgatcccctaggacgacat
ggccccagcctggataacttcctgagaaaaaaacctgtggtgccagaacacaagaagcag
cagtgcccttatgggaagaaatgcacttatggaattaagtgtaaattctaccaccctgaa
aggatcaatcaaccccagcgctcgttagctgatgaactccgagccaatgcaaggctgtct
cctaccagaagtaccagtgctgtcaaggaggagaaaaagggcaaaagaagttcccaggca
gagagtgataaaagctctttgcagaaggtctctgcagagaggaaaagcttgacccataaa
acaaagcccggtgatgttccacttcaggtcaaaggctgtgtgtcaggcagtgttcctcct
accagtgggagccataggtcctctgaaaggtaccagcatcctcacatggactctctgcct
tatatctctcaggagcatcttgactcaggcattgggtctctggagaaccaaatgtctgac
atgtggccttacagatctaccagtcactgtgatcactcccatgctgagcaggtggcagtc
tgcacctgcagtaggcagagatctgtctacccacactcttccagcttagagcaaaatggt
ctggtcccttataagcatggttcccataaatcttctgcctctggtgctagcttcttgcag
tataaccctgagatatctcactcagggccacctcactctttctcaggctatggagtaccc
atacacccaactaatgcagggcagtacagcctgcccaatgagtataacgcccctccgtct
cattctcgtgagtactggtctgaaccataccagatgcctcctcctcaggtgagatctacc
agtgtgcaagatcctcggtcagtgcagagagccccggggccaacatacggggactcctgc
cagtgggtgtctgaccagtttgtagaggagagggccaacgtgcatgtcaagctgtgtggc
atatttcatccccatttagtcgatgctgtgatgagccgtttccctctgcttttggatccc
caaaggctagctgcagagatactaacatacaagtctcagaatccaggtatatga
DBGET
integrated database retrieval system