Cygnus atratus (black swan): 118255804
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Entry
118255804 CDS
T09349
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03013
Nucleocytoplasmic transport
cata03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118255804 (SRRM1)
03015 mRNA surveillance pathway
118255804 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118255804 (SRRM1)
03041 Spliceosome [BR:
cata03041
]
118255804 (SRRM1)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118255804 (SRRM1)
Spliceosome [BR:
cata03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
118255804 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
118255804
NCBI-ProteinID:
XP_035418185
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All DBs
Position
23:complement(362369..381499)
Genome browser
AA seq
892 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKSEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRMSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRSRKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQR
RYSPSPPPKRRTASPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKG
SPPSRSNREARSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQSPSPSTRPIRR
VSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAK
KAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAATAAAAVAA
ADTTSAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaaa
cagaagaaactgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctgttaagtgcacaggaaaacattgctggtattcca
actgcatttctggaattgaagaaagaagaaattaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagggacaaggaagacaaagac
aacagagaaaagagagacagatccaggagtccaagaagacgcaaatcacggtctccttcc
cctagaaggaggtcatcacctgtcagaagagagcggaaacgcagccattctcgctcccct
catcacagaaccaagagccgtagtgctactcctgcaccagaaaagaaggaggcaactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatatcccaaaagctcctaaatctgaacctcctgtgccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggagaaggagaagactcgtcaaagatcccca
actcggtccaagtcaaggtcaaggtctcgatcccgttctccatctcattctcggccaaga
aggcgtcatagatcacggtcaaggtcttactctcctagaaggcgaccaagcccaagacga
cgaccatctccgaggaggaggagtcctccaaggcgaatgcctcccccacccagacacaga
agaagcagatcgcctgtgaggcggagaagacggtcatcagcatctttatctggtagtagc
tcctcttcctcctcctcacgttcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgtaaaacgcgtaggatgtctccttctgcaagccctcctaggcggagg
cacagaccatctccaccagcaagtccacctccaaaaccacgtagatctccaacacctcag
cagtcaaatcgttcaagaaaaagccgtggctctgtttcacctggcagagcatcagcaccc
aaacataagagtactgaaaaaagagaatctccttcaccagcaccaaaaccaaggaaagct
gagctgtctgaatcggaagaagataaaggtggtaaaatggctgcagcagattctgtgcaa
cagaggcgtcaatacagaaggcaaaatcaacagtcttcatctgattctggctcctcatct
tcgtctgaagaggaaagacctaaaagatccaatgtgaagaatggggaagttggtagacgc
cgacgccattcacattcacgcagtccatcaccatctccacgaaaacgacagaaggaatcc
tcccctcgtaggaggaggagaagtccatcacccccaccagccaggcgacggcgctctcct
tcgcctgcccctcctcctaggcggcgacggtcaccttcattgcctcggcgaaggtctccg
tcaccacccccacgtagacgctcaccttctccacggagatactctccaccaatacagaga
cgatactctccttctccacctcctaagagaagaacagcttctcctcctccccctaaacga
cgagcatcaccgtctccacagtcaaaacgcagagtctcccattcaccaccgccaaaacaa
aggagctctccagctgctaaaaggcgttcaccttcaatatcttccaagcacaggaagggt
tctcctcccagtaggtctaatcgcgaagcacgttctccaccacaaaacaaaaggcattca
ccttcaccaaggcctagagcttctcatacctctgcaagcccaccaccactgcgaagggga
gcttcagcttcaccgcagagaagacagtctccatctccaagcactagacccatcaggagg
gtgtcaagaacgccagaacctaagaagacaaaggcttccacaccaagtccacgatctgca
agacgggtgtcttcatcgcggtctgcatcaggatcacctgaaccagctccaaaaaaacat
caaggacctccatctcctgctcgatctcgttccccttctgcaaactggtcacctgcaaaa
aaggctaaaagtccaactcagagcccatcacctgcaaggaattcagatcaagaagggggt
ggaaagaagaagaagaaaaagaaggataagaagcataaaaaggataagaagcacaagaaa
cacaaaaaacataagaaggaaaaggcggcagcagctacagcagctgctgctgtggctgca
gcagataccacctcagcacaggaagaacaggaagcagagacagaacccaaaaaggagaca
gaaagtgaaccagaagacaacctcgatgacctagaaaaacacctgagagagaaagcactg
aggtcaatgaggaaggcgcaagtgtcaccaccatcttag
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