Cygnus atratus (black swan): 118256140
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Entry
118256140 CDS
T09349
Symbol
SLIT3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118256140 (SLIT3)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Axon guidance molecules
118256140 (SLIT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
EGF_TEN
LRRCT
LRR_14
hEGF
JAG1-like_EGF2
EGF_DL_JAG
LRR_EndoS
EGF_Teneurin
EGF_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
118256140
NCBI-ProteinID:
XP_035418767
LinkDB
All DBs
Position
14:15213726..15722713
Genome browser
AA seq
1520 aa
AA seq
DB search
MLAGGRSAFLCLGTILSFWSSASWMPVGGCPHKCTCIASNVDCHGLGLKTVPRDIPRNAE
RLDLEKNNITRITKMDFAGLKNLRVLHLEENQISVIERGAFQDLKQLERLRLNKNKLQVL
PELLFQNTQKLTRLDLSENQIKGIPRKAFRGIIDVKNLQLDNNQISCIEDGAFRALRDLE
ILTLNNNNITRIPVTSFNHMPKIRTLRLHSNFLHCDCHLAWLSDWLRQRRTIGQFTFCLA
PVNLRGFLVAEVQKKEFVCSGSQAEPPSCSASSITCPSACTCSNNVVDCRGRGLTEIPAN
LPEDIWEIRLEQNLIKIIPPGAFTQYKKLKRIDISKNQISDIAPDAFKGLKSLISLVLYG
NKITEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFA
PLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPRRLANKRISQIKSKKFR
CSGSEDYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQKLTRLPSHLPEYTTDLRLNDNDI
SVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGL
TGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANS
FNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQDFTCDGNDESSCLLSPP
CPSQCTCVDSVVRCSNKGLRIMPKGIPKDVTELYLEGNHLTAVPKGLSTFKHLTLIDLSN
NSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN
DLVSLSHLALGTNPLHCDCNLRWLSEWVKAGYKEPGIARCSGPDTMVDRLLLTTPTHHFQ
CKEPVDINVVSKCNPCLSNPCKNNGTCNNDPVEFYQCTCPFGFKGRDCSVPINSCIQNPC
QNGGTCHLTEANKDGFSCSCLLGYEGERCEINPDDCEDNDCENNSTCVDGINNYVCLCPP
NYTGELCDEVINHCVPELNPCQHESKCLPLDKGSRCECLPGYSGKHCEIDDDDCVGHKCR
HGAVCVDAVNGYTCVCPQGFSGLFCETPPPMVLLQTSPCDNYECQNGAQCIVAHQEPVCR
CLAGFAGQKCEKLITVNFVGKDSYVELPSAKIRPQANISLQVATDKDNGILLYKGDNDPL
ALELYQGHVRLIYDTLNSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGTPKSLGK
LQKQSSVSLNTPLYIGGIPTSTGLSSLRQGADKTPNGFHGCIHDVRINNELQDFKDLPQQ
SLGVLPGCKSCNICKHGICRSLEKTSVICECHPGWTGPLCDQEIGDPCLNHKCLHGKCMV
ANVAYTCKCMEGYTGMYCDKKNNSSNPCRILKCNHGQCKISEHGEPYCECDPNYSGEHCD
RENLCQGEIIREVVRKQQGYTSCVTASKVPRMECRGGCSNGQCCVPLRSKRRKYFFQCVD
GSTFTEELERHVECGCSKCS
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgttggctggtggaagaagcgcgtttttgtgccttggaacgatcttgagcttttggagc
tccgcgagttggatgcctgttggaggatgcccacataaatgtacgtgcattgcttccaac
gtggattgccacggactaggactcaaaactgtaccgagggatattcccaggaatgcagag
agacttgatctagaaaaaaataatatcacaagaatcacaaagatggacttcgcagggctg
aagaatctccgtgtcttacacttggaagaaaatcagatcagtgtgatagaacgtggagca
tttcaagatttaaaacaacttgagcgactgcgtctgaacaagaataaattgcaagttctt
ccagagctgctttttcagaacacccagaagttaaccagattagacctcagtgaaaaccag
ataaaaggaattcctagaaaggcctttcgaggaatcatagatgtgaagaacttgcaactg
gacaacaaccagatcagctgcatcgaagatggagccttccgagccctgcgcgacctggag
atccttactctcaacaataacaacatcacccgcattcctgttaccagtttcaatcatatg
ccaaagatcaggactctgcggctccattccaacttcctgcactgcgattgccacctggct
tggctgtccgactggctgcggcagcggcgcaccatcgggcagttcacattctgcttggcg
cctgtcaacctgcggggttttcttgtggcggaagttcagaaaaaggaatttgtctgctct
ggttcccaggctgaacctccatcatgcagtgccagttctatcacttgcccatctgcctgc
acctgcagcaacaatgtagtggattgtcgaggaaggggcttaacagaaattccagctaac
ctaccagaggacatttgggaaatacgtttggaacaaaacctcatcaaaatcatcccccct
ggagcttttacccagtacaagaaacttaaaagaatagacatcagcaagaatcaaatatct
gacattgcacctgatgcattcaaaggcttgaaatctctcatttcattagtgctctatgga
aacaagatcacagagattccccagggactttttgatgatcttgtgtctctgcagctgctg
cttctcaatgccaataagatcaactgcctgagggtaaacacgttccaaggtctgcataat
ctcaaactgctatctctttatgacaacaaactgcagaccatcagcaaggggctctttgca
ccacttcgatcgatccagactctacatttagctcagaatccatttgtgtgcgactgccat
ttgaagtggctggctgattacctgcaggataatccgatagaaaccagtggcgctcgatgc
agcaatccgcgtcgccttgccaacaaacgaatcagccagatcaagagcaagaagttccgc
tgctcagggtccgaggattacagaagtaaattcaccgggaagtgtttcatggatcttgtc
tgtcctgagaagtgtcgctgcgagggaacagttgtagactgctcaaaccaaaaactcacc
cgattacccagccaccttcctgaatatactactgatctgcgtttgaatgacaatgatatt
tctgttttggaagctattggactcttcaagaaattacccaacctcagaaaaataaatctg
agcaataataagatcaaggagattcgagaaggcacatttgatggagcttcaggagtgcag
gaactgattctgacagagaatcaactggaatcagtacacggacgaatgtttagaggcctc
acagggctgaagacattgatgctgaggagcaactctatcagctgtataaacaatgacacc
tttgctggactgagctcagtgagacttctttctctgtatgacaatcatatcagcaccatc
acccctggagccttcagcacattagtctctttgtctacaattaatttgctggctaactcc
tttaattgtaactgccatttggcctggctgggaaaatggttgagaaagaagagaatcgtc
agtggaaatccccgatgcttgaagcccttttttttaaaggatattccaattcaagatgtg
gatgcccaggatttcacctgtgatggtaacgatgaaagcagctgcttgctttctcctcct
tgtccttcccagtgtacctgtgtggactcggtggtacgttgcagcaacaaaggtctgcgg
ataatgcccaaaggaattccgaaagatgtgactgagctatacctagaaggaaaccatctg
actgctgtgccaaaggggctctccaccttcaagcacctgactctgattgatttgagcaac
aacagcataagtgtattggccaattataccttcagcaacatgactcaattatcaacactc
atcttgagttacaatagacttcggtgcattccagtccacgcgttcaatgggctcaggtct
cttcgagtgctgacgctccatggaaatgatatttccagtgttcccgaaggttcattcaac
gacctggtatccctgtcccatctggctctaggtaccaaccctttgcactgtgattgcaac
ctccgctggctttctgagtgggtgaaagcagggtacaaagagccgggaatagcgcgctgc
agcgggcccgacaccatggtggacaggctgctgcttacaacgccgactcaccacttccag
tgcaaagagccagtagatatcaatgttgtgtccaagtgtaacccctgcctctccaatccg
tgtaagaacaatgggacatgcaacaatgatccagtggagttttatcaatgcacttgccct
tttggcttcaagggtcgggactgcagtgtgcccattaattcttgcattcaaaatccatgt
cagaatggagggacctgccacctcaccgaggcaaataaggatggattcagctgttcttgt
ctccttgggtatgagggagagaggtgtgaaataaacccggacgactgcgaagataatgac
tgcgagaataactctacatgtgtggatgggatcaacaactatgtctgtctgtgccctcct
aattacacaggtgagctgtgtgatgaggtgattaaccactgcgttcctgagctaaatcca
tgccaacatgagtccaaatgtcttccacttgacaaaggatccagatgtgagtgcttgcct
ggttacagcggcaaacactgtgaaatagatgacgatgactgtgtgggccataagtgtcgc
catggagccgtctgcgtagatgcagtcaatggctacacctgcgtctgtcctcagggtttc
agtggacttttctgtgaaactcctccaccgatggttctgctccagacgagcccctgcgat
aactacgagtgccagaacggcgcccagtgcatcgtggcacaccaggagcccgtctgccgc
tgcctcgccggctttgctggacagaagtgcgagaagctcatcacagtcaacttcgtcggg
aaggattcctacgtggagctgccgtcagccaaaattcgccctcaggcaaacatttccctc
caggtagcaacagacaaggacaatggcatcttgttgtacaaaggagacaatgatcctttg
gctctggagttataccaaggacacgtgaggctcatctatgacacactgaattctccacct
accacagtatatagtgtggaaacagtaaatgatgggcaatttcatagtgtggaactcgtg
atgctgaatcaaactctgaacctggtggtggacaaggggactcccaagagtctaggaaaa
ctccagaaacagtcttctgtcagcctcaatacacccctctacattggagggatcccgacc
tctactggattatcttcactgcgccagggtgcagataagacaccaaatgggttccatgga
tgtattcatgatgtccgcatcaataatgagctgcaggatttcaaggatttaccgcagcag
tcactaggagtccttcctggctgcaaatcctgtaacatctgcaagcatggcatttgccgg
tccctagagaaaacaagtgtgatttgtgaatgtcacccaggctggacaggccccctgtgc
gaccaggaaattggagatccgtgtcttaaccacaagtgtctgcatggtaagtgcatggtg
gccaatgttgcttacacctgtaagtgcatggagggctacacaggcatgtactgtgacaag
aagaacaattcctcaaacccctgcaggattttgaaatgcaaccatgggcaatgtaaaatt
tctgagcacggggaaccctactgcgaatgcgaccctaactatagtggagaacattgtgac
agagagaatctctgccaaggagagataattcgagaagtagtccgtaagcagcagggctac
acgtcgtgcgtcactgcctccaaagtaccccgcatggaatgccgtggcggctgcagcaat
gggcagtgctgcgttcccctccgaagcaaacggcggaaatacttcttccagtgcgtggat
ggctccaccttcacagaagaactggagagacatgtggaatgcggctgctcaaaatgctca
taa
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