Cygnus atratus (black swan): 118256203
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Entry
118256203 CDS
T09349
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118256203 (PCDH12)
Cell adhesion molecules [BR:
cata04515
]
Cadherins
Protocadherins
118256203 (PCDH12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
118256203
NCBI-ProteinID:
XP_035418837
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All DBs
Position
14:complement(13110682..13119968)
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AA seq
1146 aa
AA seq
DB search
MQRQLGKPMPASRSGGAVGIVSGLLLLGRSALQLPAFWWYLFLSADAQEVATFTVQYRLY
EEVPEGTVIGTLAEHFEWGESGETEESFRLLQSPRGFPLRVGSGDGELSTAGRVDREQLC
RHGNPCWVSFDVLATRQLALIHVEVQVLDINDNAPRFPTPELELEMSESASLRTRIPLDR
ALDADAGPNAHCSYTLSPSEHFALDVVSSSDGTKHAELVVVKEVDRELHSSFDLVLTAAD
HGEPPQSGTALIKVIVLDSNDNSPVFAESSLVVEVREDAPPGTLLVMVTATDPDQGPNGE
IEYSLSKHAPLEVLSTFGIDARTGSVVLKRPLDYEETHAYELDVQARDLGANPIPAHCKI
LVQVLDVNDNAPDVHVTWAAQAPVLSEAVPKDSFVALVTASDPDSGNNGRVHCSLSPGDE
HFRLKRTNSHSYLLMTSATLDRELRAEYNLTLVARDQGERSLAVLKHLTICISDVNDNAP
SFERAAYESTVKENSEAPTSLLTVHATDPDLGFNGKITYSIQDASVSSLVSIDPTTGEVF
ALQAFDYEQMSSLEFLVTAEDGGHPRLASNVSVQLAVLDQNDNAPVITEPVLVGGAATLS
VLVGTETGCIWVTPGNGSTLGTAVTNATPVSCSDASLLFTVVARDGDSGPNGALRFDLMG
GNGARLFVLDPLSGQLFLNTTNATSLTGTRWDLAIRVSDGGDEPLHTQAWVHLLFRRHGA
FSKISAWELGQLSPPVVAVICLAALLGGCLLFSALTLSLRSKEKKDGMAYNCRVAEDTHR
QQQLKKPPRQIQKADIHLVPALRGRPRGAEPLQPCPEGSPQPPIHLTPTLYRTLRNQRTS
KDSDEEQGMFNLAIMQRRPCQPHRPKNASVSPPDVLPHGEGSEKPLLGESLLYPPQPVGT
VPQGPGQPPPHQHILRSLVRLSLVALAEQSPNGEFAMESAPVQQISQLLSLLHQGQFQPK
TNHRGNKYTAKNGSRAAGLDADCLSTKDSGHGESEAEDRDSESGFDLSVPQLVGEELETL
LEPQAELALKRLTAADPAWVARLSLPLTGSYKDNVFSPDSLHSPQDEETARQEKPRTFET
FGKGAGSDSNTAGTRLASTFLSEMSTLFEMILSQKVQVHNETGSGLLRQLSARGKSLGLD
DSAPVL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcagctggggaagcccatgcctgccagccggagtggcggggctgtgggcatc
gtcagcgggctgctgctgctgggtcgctccgctctgcagctcccggccttctggtggtac
ctcttcctctccgctgacgctcaggaggtggccacgttcacggtgcaataccggctgtac
gaagaggtgccggagggcacggtgatagggacattggctgagcacttcgagtggggcgag
agcggcgaaacggaggaaagcttccgtctgctgcagagccccagggggttcccactgcgc
gtggggagcggggacggcgagctgagcacggccgggcgggtggacagggagcagctgtgt
cggcacggtaatccctgctgggtctccttcgatgtgctggccacccggcagctggctctg
atccatgtggaggtccaagtgctggacatcaatgacaacgcgccccgcttccccacaccc
gagctggagctggagatgtcggagagtgcatcgctgcggacgcgcatcccgctggaccga
gccttggatgctgatgctggccccaacgcacactgctcctacacgctgtcccccagcgag
cactttgcgctggatgtcgtctccagctccgatggcacaaagcacgccgagctcgtcgtg
gttaaagaggtggaccgggagctgcactcctccttcgaccttgtgcttacggctgctgac
catggggagccaccgcagtcaggtactgctttaattaaagtcatcgtcctcgactccaat
gataacagccccgtgttcgcagagagctctttggttgttgaggttcgggaggatgctcct
cctgggaccctcctggtgatggtcacagccactgaccctgaccagggtcccaacggggag
atcgagtacagcctcagcaagcacgcgcccctggaggtgctgagcaccttcggcattgac
gcccgcacgggcagcgtggtcctgaagcgcccgctggactacgaggagacccacgcctac
gagctggacgtgcaggccagggacctaggcgccaaccccatcccagcgcactgcaagatc
ctggtccaagtgctggacgtcaatgacaatgcgcccgatgtccacgtcacctgggcggcg
caggcacctgtgctctcagaagctgtccccaaagacagcttcgtggccctagtgacagcc
agtgaccccgattcagggaacaacgggcgggtgcattgctccctgagccctggggacgag
cacttcaggctgaagaggaccaacagccacagctacctgctgatgaccagcgccacgctg
gacagggagctgcgcgccgagtacaacctgacgctggtggcgcgggaccagggcgagcgc
tccttggctgtgctgaagcacctcaccatctgcatcagcgacgtcaacgacaatgccccc
tcgttcgagagggccgcctacgagagcactgtgaaggagaacagtgaagcgccgacctct
ttgctcactgtccacgccactgaccctgacctgggtttcaatgggaagatcacctacagc
atccaggacgcctcggtttcaagtctggtctccatcgaccccaccaccggggaggttttt
gccctccaagcttttgattatgagcagatgagcagcctggagttcttggtgaccgcagag
gatggcggccaccccaggctggcctccaacgtctctgtccagctggctgtgcttgaccag
aatgacaatgcgcccgttatcaccgagccggtgctggtgggtggcgcggccacgctgtcc
gtcctggtcggcaccgagacagggtgcatctgggtgacccctgggaacgggagcaccctg
gggacagcggtgaccaacgccacgccggtgtcatgctccgacgcttccctcctcttcacc
gtggtggccagggatggagactccggtcccaacggggctctgaggtttgacctcatgggc
gggaacggtgccaggctcttcgtgctggacccactctcagggcagctcttcctcaacacc
accaatgccaccagcctcaccggcacccggtgggacctagccatcagggtgagtgatggc
ggggacgagcccctgcacacccaggcatgggtgcacttgctcttccgacgccacggggct
ttttccaaaatctccgcctgggagctggggcagctgagcccgcccgtggtggctgtcatc
tgcttggccgctctcttgggtgggtgcctcctcttttcggctttaaccctgtccctgcgc
agcaaggagaagaaggacggcatggcctacaactgcagggtggcggaggacacccacagg
cagcagcagctgaagaagccgccccggcagatccagaaggccgacatccacctggtcccg
gcgctgcggggccggccccggggcgctgagcccctccagccctgcccagagggctccccg
cagcctcccatccacctcacccccactctctacaggaccctgagaaaccagaggacctca
aaggactcggatgaggagcaagggatgttcaacctcgccatcatgcagcgccggccctgc
cagccccacagacccaaaaatgcatccgtgagccccccagacgtcctgccacatggtgaa
ggctcggagaagccactgctgggagagtccctgctgtacccaccccagccagtgggcacc
gtgccgcagggaccggggcagcccccgccccaccagcacatcctcaggagcctggtccgg
ctctcgctggtggccctggcagagcagagccccaacggggagtttgccatggagtcggcc
cccgtgcagcaaatctctcagctgctgtctctgctgcaccagggccagttccagcccaaa
acaaaccacaggggaaacaagtacacagccaagaacggcagcagggctgcggggctggat
gctgactgcctgagcacgaaggacagcgggcatggtgagagcgaagccgaggaccgcgat
tcggagagcggctttgacctctccgtgccgcagctggtgggagaggagctggagaccctc
ctggagccgcaggcagagctggccctcaagaggctgacggctgctgatccagcatgggtg
gcgcggctctccctgccgctcaccggtagttacaaggacaatgtcttctcccctgactct
ctgcattcacctcaggacgaggaaactgcaaggcaggagaaaccacggacttttgagacc
tttgggaaaggggctgggtctgactcaaacaccgctgggacaagactggccagcactttc
ctttcagaaatgagcaccctctttgaaatgattctgtcccagaaggtccaagtccacaat
gaaacaggttcagggcttctgcggcagctgtcagcacgtgggaagagccttggactggat
gacagtgctcctgttctgtag
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integrated database retrieval system
