Cygnus atratus (black swan): 118256215
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Entry
118256215 CDS
T09349
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118256215
Cell adhesion molecules [BR:
cata04515
]
Cadherins
Protocadherins
118256215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
118256215
NCBI-ProteinID:
XP_035418845
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All DBs
Position
14:12341609..12344577
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AA seq
811 aa
AA seq
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MASARQVLCVCALLCVPRVRCEPIRYSVAEEGESGSVVANVAEDAGLTPAQLSARRARIA
SPAGRQHFRLERATGRLVLAERLDREEMCGRSLTCTLAFELLLENPLQFFRVEVAVEDVN
DHSPVFPEERVTFQILETSDPGSRFPVEAAQDLDVGSNSIQTYSITPENEYFSVSFKHPR
NKFIELVLEKPLDREEQPELLFSLTAVDGGSPRRSGTTQIHIVVLDVNDNAPIFTQDMYV
GQVLESAPAGSVVLRVVATDADVGLNGDISYRFSQAVSESQLAFTIDTMSGEIRVTKPLD
FETTQKYELSVRATDGGGLSGMCNVVVEVMDVNDNAPEVVVSSFSSPLPENTLPGTLVAV
FAVRDQDSGVNGEITCALEDQLSFSLRPAYKNYYELVTVSTLDREETAQYLVVITAADAG
SPPLTTTQTFTVDISDVNDNAPVFNQTSYTMYVRENNIPAVLVGAVSAVDSDAGPNAKVI
YSLRPVPPAEQDSCSCISVNSENGHVFVLRPLDYEQVRQLEVLVSATDAGSPPLSTNVTV
RLLVVDENDNAPLVLHPAQDSSPPSSELVPASSEAGDLVTKVVAVDADSGQNSWLSFHLL
RATDPGLFAVGTQNGEVRLRRPVTERDAVKQKLEVLVRDNGRPPLSATAALSILLLNGLS
QEHLPQQEVAVQDEDSSLTIYLIISLVFVSLLFLTSVAAFVACKVCKRKELKGGHVLYGT
GNLQSSLADGAAAGTLPHTYCYEINLTTGSGNSEFKFLKPILPSLPPQHSGTARGVDGAE
DFPPVPNSMGDAALDISGPPSVGHFNGFPFN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaaggcaagtgctttgtgtgtgtgctttgctgtgcgtgccgcgcgttcgc
tgcgagcccatccgctactccgtagccgaggagggggagagcggctccgtggtggccaac
gtggcggaggacgcggggctgaccccggcgcagctgtcggctcgcagggcacgcattgcc
tcaccggccggccggcagcactttcgcttagagcgcgccaccggccgcctcgtcctggcg
gagcggctcgatcgcgaggagatgtgcggccgctcgcttacctgcacgctcgccttcgag
ctcctgctcgaaaacccgctgcagttctttcgggtcgaggtggccgtggaggacgtcaac
gaccactcgccggtctttcccgaggaacgagtcacttttcagatcctggaaaccagcgac
cctggctcacgtttccccgtggaggcggctcaggacctggacgttggcagcaacagcatc
caaacttacagcatcactcctgagaacgagtacttcagtgtttcttttaagcacccaaga
aataagttcatagaattggttttggaaaagcctctagacagagaggagcagccagagttg
cttttcagtctcactgctgtggacggtggctctccacgtaggagcgggaccacccaaata
cacatcgtggttctagatgtaaatgacaatgctcccatctttactcaggacatgtacgtt
ggtcaggttttggaaagtgccccagcaggctctgtggttctcagagttgtagccacagat
gcagatgtgggactgaatggtgacatctcctacaggttcagccaagcagtcagtgaaagc
caattggctttcacgattgacaccatgagtggtgaaattcgagtcacaaagcccctggat
tttgagaccacacagaaatatgaactcagtgtgcgggcaactgatggtggaggcctctca
ggcatgtgcaatgtagtggtggaggtgatggatgtgaatgacaatgcaccagaggtggtg
gtcagttccttcagcagccccctccctgagaacacactgcctgggacactggtagctgta
tttgctgtgagggaccaggattctggtgtgaatggggagatcacctgtgcccttgaagac
cagctctccttctccctaaggccagcctataagaattactatgagctagtgaccgtgagc
acattggaccgtgaggagacagctcagtaccttgtggttatcacagcggcagatgcaggg
tctcctcctctcaccactacgcagaccttcacggtggacatctccgatgtcaatgacaat
gcccctgtcttcaaccagacatcatacaccatgtatgtgagagagaacaatatccctgca
gtgcttgttggggctgtcagtgcagtggactcagacgcaggacccaatgccaaggtgatc
tattccctgaggcctgtaccgcctgcagagcaggactcctgctcctgcatctctgtgaac
tcagagaacggacatgtgtttgtgctgcgtccactggactatgagcaggtgaggcagctt
gaggtgctggtgagtgccaccgatgcggggtcccctcccctcagcaccaacgtcaccgtc
cgcctccttgtggtggatgagaatgacaatgccccactggtgttgcaccctgcacaggac
agcagcccgccatccagtgagctggtgccagcctcgtccgaggctggggacctggtcacc
aaagtggtggccgttgatgccgactctggtcagaactcatggctttccttccatcttcta
agggccacagatcctgggctgtttgctgtgggtacccaaaatggggaggtacggctgagg
aggccagtgacagagagggatgccgtgaagcagaagcttgaggtgctggtgcgtgacaat
gggaggccaccactgtcagccactgcagcactgagcatactcctcctcaacggcctctcg
caggaacacctgccacagcaggaggtggctgtgcaggatgaagacagctccctgacaatc
tatttaatcatttcactggtctttgtctccctcctcttcctcacatctgtcgcagccttt
gttgcttgcaaggtgtgcaagagaaaggagctgaaaggagggcacgtgctgtatggcaca
ggcaacttgcagagcagtctggctgatggggctgctgctgggaccctgccccacacctat
tgctacgagatcaacctgaccacgggctcaggcaacagcgagttcaagttcctgaagccc
atcctccccagcctgccaccacagcactctggcacagccaggggtgttgatggtgcagag
gatttcccaccagtccctaactccatgggggatgcagccctggacatctctggtccacca
tctgttggacactttaatgggtttccctttaactag
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