Cygnus atratus (black swan): 118256272
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Entry
118256272 CDS
T09349
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118256272 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118256272 (VCPIP1)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118256272 (VCPIP1)
Peptidases and inhibitors [BR:
cata01002
]
Cysteine peptidases
Family C64
118256272 (VCPIP1)
Ubiquitin system [BR:
cata04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
118256272 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
118256272
NCBI-ProteinID:
XP_035418951
LinkDB
All DBs
Position
2:complement(124311666..124327969)
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AA seq
1214 aa
AA seq
DB search
MSQPQQQPPPPPPSPQQQAPAPPPAGGKKRERRIFSGTCPEPKCQARLFFPAAGPQGGGS
IECTDCGRRHEQRQLLAVEEVTDPDVVLHNLLRNALLGVSPPRRSTELVKVMGLSNYHCK
LLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETIGYGKDRSGSL
VYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHFEE
NLSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIILLDS
LSGMRSSGDYSATFLPGLVPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPK
LPRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFMSKHGIH
PSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVTDNRLHRCLICGALSEHHVPPEWLAPG
GKLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPAKDVLVPDYSLSSLTACNWCHGNLVRR
VREDGSVSYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVY
WFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNI
DGAHAQRADEVQQGQEAEAQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIADQASVM
QKRKSEKLKQEHKGQPRTVSPGAVREGPSSAPATPTKAPYSPTSTKEKKIRITTNDGRQS
MLTLKCTTTFLELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQHGDRIA
IEILKGKEESSQPTAAHSAHAVKHEDVAVTSKISSKELQEQVDKEMYSLCLLATLMGEDV
WSYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLELCVDAAG
HFPIGPDVEDLVKEALSQVRAEATSRSREASPSHGMLKLGSGGVVKKKSEQLHNITAFQG
KGHSLGTASSSQQHDQRARETPLLRKHSTETDFSPAKIEPSAFTAASGNSELIRIAPGVV
TMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSASVDVSQRKVEAVSSTA
KTGSFQAGLPESFSAPGGTEHLNTESTDGNMVNSVGATFPARSKAQKGNSVEELEEMDSQ
DAGITNVTEPMDHS
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccccagcagcagccgccgccgccgccgccgtctcctcagcagcaggcgccg
gcgccgccgccggccggcggcaagaagcgggagcggcgcatcttctcgggcacctgcccc
gagcccaaatgccaggcgcggctgttcttcccggccgccgggccgcagggcggcggcagc
atcgagtgcacggactgcgggcggcgccacgagcagcggcagctgctggccgtggaggag
gtgacggaccccgacgtggtgctgcacaacctgctgcggaacgccctgctgggcgtcagc
ccgccccgcaggagcacggagctcgtcaaagtcatggggctctccaactaccactgcaag
ctgctggcccccatcctggcccgctacggcatggacaagcagacgggcaaggccaagctg
ctgacggagatgaaccagggagacatctttgactgctccctgctgggcgaccgcgccttc
ctcatcgagccggagcacgtggaaaccatcggctacggcaaggaccgctcgggcagcctc
gtctacctgcacgacactctggaggacatcaagaaggccaacaacagccaggagtgcctc
atccccgtccacgtggacggggacggccactgcctggtccacgcggtctcacgggcgctc
gttggccgggagctgttctggcacgcgctgcgggagaacctgaagaagcactttgaggag
aacctgagccactacaaggcgctcttccacgattttatcgacgcagccgagtgggaggac
atcatcaacgagtgcgaccccttgttcgttcctcccgaaggcgtgccgatgggcctcagg
aacatccacatcttcggcctggccaacgtgcttcaccggcctatcatcctgttagactcc
ctgagcggaatgcggagctccggggattattcggcgacattcctccctggcctggtaccc
ctagagaagtgcatggggaaagacggcatgttgaacaagccgatctgcattgcgtggagt
agttcggggcgtaaccattatatccctctagttggaataaaaggtgctgctttacctaaa
ctgcctaggaagctccttcccaaagcctggggagttcctcaagacctcatcaaaaagtac
atcaagttagaggaggatggcggttgcgttattggaggagacagaagcctgcaagataag
tacttgatgaggctggttgctgccatggaggaggtcttcatgagcaaacacggtattcat
cccagtcttgtcgctgacgtgcatcagtatttctacagaaggactggtgtcataggagtc
cagcccgaagaagtcactgcagccgccaaaaaagcggtgacggacaaccgcctgcacagg
tgcctcatctgcggggccctttcggagcaccacgtgcctccagagtggctggcgccgggc
gggaagttgtacaacctggcgaaaagcacccacgggcaactcaggcctgacaaaaactac
agctttcccctcaacagcctggtgtgttcttacaaccctgcgaaggacgtgctggtgccc
gactacagcctgagcagtctgactgcttgcaactggtgtcacggcaacctggtgcgccgt
gtcagagaagatgggtccgtctcgtacttggacggggacagaactaacaccaggtccacg
ggtggcaaatgcggctgtggattcaagcactactgggaaggtaaagaatacgacaatctg
cccgaagcgttccctattactctggagtggggtggaagagtggtgagagagacggtctac
tggttccagtacgaaagcgacacctctctgaacagcaacgtgtacgatgttgccatgaag
ctcgttaccaagcacttccccggggagtttgggagcgagattcttgttcagaaagttgtc
aacacgatattgcatcaaactgccaaaaagaaccccgatgattacacccctgtaaatatc
gacggtgctcacgcccaaagagctgacgaggtgcagcaaggacaagaggcagaggcacag
cttcccaccaaaattattttgactggacagaagacaaaaactttgcacaaggaggagcta
aatatgagcaaaactgaaagaactattcagcagaacattgcagaccaggcttctgtgatg
cagaaacggaaaagcgaaaaattaaaacaagagcataaagggcaacctaggactgtttcc
ccgggggctgttcgtgaggggccgtcctctgcacctgctacgccaacgaaagccccgtat
tcacctacatcaacaaaagagaagaaaatccgaataacgaccaatgatgggaggcagtcg
atgctcaccctgaagtgcaccaccactttcttggaactgcaggagagcatagctagagaa
ttcaatattcctccgtacttgcagtgcattcgctatggttttcctcctaaagagcttctg
cctcccaaagaaggcatggagaacgaacctgtgcctctgcagcacggtgacagaattgcc
atagagatcctgaaaggcaaggaggaaagcagccagccgactgcagcgcactcggcccat
gccgtgaagcatgaagacgttgctgtgactagtaaaatctcatcgaaggagctgcaagag
caggttgataaggagatgtactctctgtgtcttctagcaacactaatgggagaagatgtt
tggtcttatgcaaaggggcttcctcagttgtttcagcagggtggagtgttctacagcatc
atgaagaaaaccacaggtttggctgacggcaaacactgtacttttccgcatctgcctggt
aaaaactttgtgtacaatgcagcagaagatcgattggagctgtgtgtggatgctgctggg
cactttcccatcggtcctgatgttgaagacttagttaaagaggccttaagtcaagtgcgt
gccgaagctacttcgaggagcagggaagcaagcccttcgcatggaatgctgaagctgggt
agtggtggagtagtgaaaaagaaatctgaacaactgcataacataactgcatttcaaggc
aagggccactccctaggaactgcatctagtagtcaacaacatgatcaaagagccagggaa
acaccactcttaagaaagcatagcacagaaacggacttcagtcctgctaaaattgagcct
tctgcattcacagctgcttctggtaacagtgagcttatccgaatagctcctggagttgtg
acgatgagagacagcaggcagcttgaccctactttgattgaggcacagagaaaaaagttg
caggagatggtctcttctattcaggcttcaatggatagacatttgcgggatcagaataca
gagcagtcagcatcagttgatgtctctcaaagaaaagtagaggcagtgagttcaactgct
aaaactgggagcttccaggctggcttacccgagtcgttttctgcaccaggtggtactgaa
cacttgaatactgaatcaactgatggtaacatggtaaattctgtgggagcaactttccct
gcgaggtctaaagcacaaaagggaaattctgttgaggagcttgaggagatggatagtcaa
gatgcaggaattactaatgttactgagccaatggatcactcttga
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