Cygnus atratus (black swan): 118256295
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Entry
118256295 CDS
T09349
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118256295 (TRPA1)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118256295 (TRPA1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118256295
NCBI-ProteinID:
XP_035418981
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Position
2:complement(126575515..126614581)
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AA seq
1126 aa
AA seq
DB search
MKRSLWRLCQSREKAAGSSAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQVESVS
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKFLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAKEGHAKAVRLLLDYGAKILLNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVLTFSHYSNANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKLKDGEDIFYEPLAILNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTEIYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTDAQSTDTTLELEVLKQKYRLKDLSTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNPSTEKNNSFF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgtggcggctctgccagtcgcgggagaaggcggccgggtccagcgcc
taccagggcgtcgtctgcgaagcggatgccgcctccgtcgcctcgcaggatgtcttcaag
gtgatttcagatggaagtgcctgtaggctgcggagcttcattaagaagaatcgttctgga
cttaccaaagtggatgaattaaatgccaccccactgcatcatgctgcagaaggaggtcaa
atagaattaatgcagttgattatagatgattcgtcctgtgaagtattaaatgtgatggat
tcttctggaaataccccactgcactgggccacaaagaaaaaccaggttgaaagtgttagt
ttacttctcagtagaggagccaatccaaacattctcaactccaatatgatggcacctttg
catatggctgtacagtccctgcataatgaaattgttaagattttagtccagcatagcagt
acagatgttaatttggaaggtgaagcaggaaacacacctataattgtagcatgttacaag
gataatcccgaagcactgacactcctgattgaaaatggtgggaaaatatgtaaaccaaac
aaaacaggatgtatgcccatccacgctgctgcattttcaggtgcaaaaacatgtatggaa
attcttttaaaaaaaggtgaagaattgggtcattctgctaaaacccacatcaattttacc
aataatgggaagtgcagtccacttcatttggcagttcaaagtggggacttagaaatgatt
aaaatgtgcattgaatttggagcccaaattgatctaaaacagaatgaaaaatgtacggca
cttcattttgctgccactcaaggagcaactgagattgtgaagttaatgatgtcatcctat
gctggtgaagaatccattattgatgctgttgatgggaataaggaaacattgcttcacagg
acggccttgtttgatcattatgaactggcagagtatttgatttcgatgggagcaaatatt
gatagtgttgacatagaaggtcgatccccgcttctgttggccacttcttgtgcatcatgg
aaaattgtgaatttactgctctcaaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcatttgacggtgttacagcccggaggattacagcatctgaatgagaaa
tttctgcagatggaacatattaaaaatcttgtagtggatgaagataatgaaggatgcact
ccattgcattatgcatgcagacaaggtgtggccctctctgtaaataatttactcagcctc
aatgtttccatttattctaagagcagggacaagaagtcacccttacactttgctgccagc
tatggacgcatcaatacatgtcaacgacttataagagatatgaaagacacaagacttttg
aatgaaggtgataagaagggaatgactccccttcatttggcagcccagaatggtcatgag
aaggtagttcagtttcttctgaagagaggggcccttttcctctgtgattataaaggctgg
acagccctgcaccatgctgcctttggaggatacactcgcacaatgcagataattttggat
actaatgtgaagtgtactgacagagtggacgaagaagggaacacagctttgcacctagct
gcaaaagaaggacatgcaaaagcagtaaggttacttcttgactatggtgcaaaaattctg
ttgaacaaagcagtagcttcttttttccatgaagcaatacacaataggaggaaagacgta
gtatcagctgtaatcttgcacaaaagatgggaagaagctgttttgacattctctcactat
tctaatgccaataagtgtcctttgctggaaatggttgagtatcttcctgattcctttaaa
ctggttttggacaactgcataattgagtcttcagaggaaaagacaagtcgagacttttat
attgaatataacttcagatatcttcagtgtcctctgacacttaacaagaaattaaaggat
ggtgaagatattttctacgaaccacttgccattttaaatgccatggtacgtcacaatcgc
atggagctacttagtcatcctgtgtgcaaagaatatttgcttatgaaatggatggcctat
gggtttagagcacatctgatgaatttaggcatatattctcttggtctcatcccattgact
cttctggtcacccatatacagccaggaagacctctgaatggaacagaaatctatgaagca
agaccattagaatatgaggactcatacttcacaagggtgtgtatgtgtttagttttaatt
atgagtttactgggaatctgcaaagaaatatttcagctcattcagcagaaattgaaatat
ttgttggattactccaatctactggactggacaatttatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgta
tacttgtcttggatgaacttcttgctttaccttcagcggtttgaaaattatggcatttat
gttgtgatgttctgggaaattctgaggactttgattaggattgctgtcgttttctttttc
ctgatattggcctttggattgagtttctttgtccttttgggttcacagcaaacatacagc
acgccactgctctctgtaatgaagacatttgcaatgatgctgggagacataaattatcat
gatgcatttcttgatccattactgagcagtgaattgccatatccattcctgagctacaca
gttctcattatatttaccttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggggacatagctgaagtgcaaaaatatgctgcactcaaaaggattgcaatgcag
gttaatcttcacacaaacttagagaagaagctgccattttggttcctaagtcgggtggac
caggaatcaatcaccgtatatcctaacagaccaagatactgtggatttatgagtgtgttc
cagtattgctttgggtgtgaggactctaccacagatgctcagagcacagatacaacctta
gaactggaagttctgaagcagaaatacaggctcaaagatctatcaactctattggaaaag
caacacgacctcattaaactgattatacaaaaaatggagatagtgtcagaggctgaggat
gaagacagcaatgatttatttcagcacaagtttaggaaaaggcagttagagcataagaat
agtaaatgggatacagtgttaaaagctgttaaaacaaatgtgcctaacccaagcacagaa
aagaacaatagcttcttctag
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