Cygnus atratus (black swan): 118256377
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Entry
118256377 CDS
T09349
Symbol
RAI1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118256377 (RAI1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118256377 (RAI1)
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
118256377
NCBI-ProteinID:
XP_035419205
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Position
15:complement(3116978..3155656)
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AA seq
1911 aa
AA seq
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MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYSG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQAWGSQPQALPG
GVAKYEDSLMKKTAAPAGGRPYHEPAAATPLPFRTHFQQQQQQQPPALPYPKLQRQKLPN
DVSSPMPFPQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPLERPLGSAA
SLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPQPPQPPQPQPQPLQGRHHAPET
LHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPS
PLMPNLENFQYSQQPLSAGAFPAGIADHSHFMPLLNPSPTDGTSPDAQSGNCKNLPKEKL
PENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSAVPQKKGIKTPARTPEQLKGQHCSP
ESSTYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCNQNRSPARVNSN
SKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQE
ELASEIIVLQDAISEKGDKAWANSPLLSKEATKSPFQLENHRPCLDSMVKGTWPSQGDSS
TLTEPLKLDKASGGSVGKDFGEEVYEGPQVEFAATETKDSLKDAAPLAFNSKPSIPAATS
SAGASSFSCYSNTTANSVDSENAMEHFEWPEESLGEACLRWKELGSGLQASDLPKGLFPS
KMVGSCKEKKNACSLDLCDGEQPAKSEPARDFAQQAMEEEEEETLTYDEATKADSERWLQ
DTRHCCSAGDFGEIPMISSPELKESDLEAEEYSSLCELAGAEQKSVPYNASPPKPPEMPA
VLSASEVPVSAEETVSTVEKEGSAPSARLSGQSVILLGPAVGTETKVKSWFKSSLPHIQP
EESDGGEKPHPEVADSEPLKKQLVPETMLGKMEPVSRGKSLRNKRVHCRLPEGDSAGSVV
PSPFDELPVACIRPDGQVEMPSKNAHSQTPRFAAEGLPARMCTRSFTALAEPRTPAPLEG
LKVPVHQEKLGKKPACGVKQRVAFKARKRSGRPAPKVVQNTGGDATLLVPSLVPAEEAAG
PTPPEGDAVDVGERDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKAPKKLISNNH
LPPAFKLAPPGSPHKEGKVGARMKLPKAGPGVGGKMSERPLHSLKRKSTFISPIPAKKRN
LVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKAKLPPKSPGEAIPKPPLPKEAPDVCIKI
TSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKPAATAAAAAVAATAAAT
YGTSLSPAGADRERAVKHGGVALAVGDARLPKPAAAQKAPTAPSAEQFCRNPHGRALKGK
PGSGKKLSANGFQGETCVPAMVAQPGSAVVAKNMALLPKKRNRKGKAAALGMAKAPLGPT
LPLPPRERAAGPGGGDEAPREGKKPKSEEKEAGGGEGLEGRAAGGPARGPKPRANHANYN
GYSKRQRKRLAHGKAKAVPSRCKSRGKRRRQAQQVPLLHPAEPEIRLKYISCKRLRADSR
APPFAPYVRVERHGEFTTACTVVNSPGDEARLQRGPASTAPRPRAALPASSTMHLGPVVS
KALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARAEGEEAGVAERGP
KGTESSWAAGGKPPRPEGAAEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEAAEKPRR
HECNKAESPPQEPAGDTQEHWLHEACAIWTAGVFLVAGKLYGLQEAIKVAADVKCSSCQQ
AGATVGCCQKGCPHTYHYACAIDTGCLLTEESFSLRCPKHKVSPEPLRQPV
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcaactgccgtactcgggc
tacgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcaaggcaggccggccttttccaattacgccgtgcaggagaacagcccctacccggcc
cgctattcgggggatgagagcctgcaggcgtggggcagccagccgcaagcgctgcccggc
ggcgtggccaagtatgaggacagcctgatgaagaagacggcggcgccggcgggcgggcgg
ccctaccacgagccagcggcggcgaccccgctgcccttccggactcacttccagcagcag
cagcagcagcagccgcccgcgctcccctaccccaagctgcagcggcagaagctgcccaac
gacgtctcctcgcccatgcccttcccgcagagcccccatttcgggcagcactcgcagtcc
ttccccgcctcctccacctactcctcggtgccggggggcagccagccggcgcactcctac
aagagctgcacggcgccctcggggcagccgccgctggagcggcccctgggcagcgccgcc
agcctggcccccggcccccgcgtgcccaacctgcacggctaccagcccaaccgcatcggc
tacgagcagcccccgcagccgccgccgcagcccccgcagcccccgccgccgccgcagccc
ccgcagcctccccagccccagcctcagcccttgcaggggaggcatcacgccccagagacc
ctccactaccaaaacctggccaagtaccagcattacaaccagccggggcagacctactgc
cagggcgacgcgccgcccgtccggacgccggagcagtactaccagaccttcagccccagc
gccagccactcgccggcacgctccgtcggccggtcgccgtcctacagctccacgccgtcc
ccgctgatgcccaacctggagaacttccagtacagccagcagccgctgagcgccggcgcc
ttcccggccggtatcgccgaccacagccatttcatgccgctgctgaacccctctcccacc
gacgggacgagcccggatgctcagtccgggaactgcaagaacctgccgaaggagaagctg
cccgaaaacctgctgtcggacctgagcctgcagagcctgacggcgctcacctcccaggtg
gagaacatctccaacaccgtccagcagctgctgctctccaaatcggctgtgccccagaaa
aaaggcatcaagaccccggcgaggacccccgagcagctcaaagggcagcactgcagtccc
gagagcagcacgtactctgctgagcaggtcgggacgcccctgtccgacccgctcagcacc
ccgcagtccgtccacgccgagacgcaggacgccgactatctcagcggctcggaggaccag
ctggagaggagcttcctgtactgcaaccagaaccgcagccctgcccgcgtcaacagcaac
tctaaggcgaagcccgagtctgtgtccacctgctccgtgacctccccggacgacatgtcc
accaaatcggacgattccttccagagcatccacgccagcctgcccctggagaccttcacc
aagtacgtgaccaacgagcgggactgtccccggctgctcctcagcgcgctgtcccaggag
gagctggcctccgagatcatcgtcctgcaggacgccatcagcgagaagggggacaaagcc
tgggccaactcgcccctgttgagcaaggaggccaccaagtcccccttccagctggagaac
caccggccgtgcctggactccatggtgaagggcacgtggcccagccagggtgactccagc
accctcactgagcccctcaagctggacaaggcttcggggggcagcgtggggaaggacttt
ggtgaggaggtgtacgagggtccccaggtagagtttgcggccaccgagaccaaggactcg
ctcaaggatgcggccccgctggcattcaattccaagcccagcatcccagctgcaacttcc
agtgcaggggcctccagcttcagctgctactcgaacaccacggccaactcagtggactct
gaaaacgccatggagcacttcgagtggccggaggagagcctgggcgaggcgtgcctcagg
tggaaggagctggggtcgggcctgcaagcctccgacctccccaagggcttgttccccagc
aaaatggtggggtcatgcaaggagaaaaaaaatgcctgcagcttggatctgtgcgacggc
gagcagccggccaagagcgagccggcccgggactttgcccagcaggcgatggaggaagaa
gaggaggagacgctgacctacgatgaggccacgaaggcagacagtgagaggtggctgcag
gacacccggcactgctgctcggccggggactttggtgagatccccatgatctcgtcgccg
gagctgaaggagtcggacctggaggcggaggagtactcctcgctctgcgagctggcgggt
gcggagcagaagtcggtgccctacaacgcctcgccgcccaagcccccggagatgcccgcc
gtgctgtctgccagcgaggtgcccgtgtccgccgaggagaccgtcagcacggtggagaag
gagggctcagcaccctcggcacggctctccggccagtccgtcatcctgctgggacctgcg
gtgggcacggagaccaaggtgaagagctggttcaagtcctccctgccccacatccagccc
gaggagagtgacggaggggagaagcctcacccggaggtggcagactccgaacccttgaag
aagcagctggtgcccgaaaccatgctggggaagatggagcctgtctcacggggcaagagc
ctccgcaacaagagggtccactgccggctgccagagggggacagtgctggcagcgtggtg
ccgagccccttcgatgagctgccggtggcgtgcatcaggccggacgggcaggtggagatg
ccgagcaagaacgcccacagccagacgccgaggtttgcagcggagggcttgccagcacgc
atgtgcacccgctccttcaccgccctcgccgagccccgcaccccggccccgctggagggg
ctgaaggtgccggtgcaccaggagaagctggggaagaagccggcctgtggggtgaagcag
cgggtggctttcaaagccaggaagcgcagtggccggccagcccctaaagtggtccaaaac
accggcggcgatgccaccctcctggtgcccagcttggtgccggctgaggaggcagcgggg
ccgacgccgccggagggggatgcggtggatgttggggagagggaccagcggtcgatgatc
ctgcgctcccggacgaagacgcaagaggttttctacaccaagaggcggcggggcaagcgg
gcggcggatgtgcggctgaagaactgcaaggcacccaaaaagctcatctccaacaaccac
ctcccgcccgccttcaagctggcccccccgggcagtccccacaaggagggcaaggtgggt
gcccggatgaagctgcccaaagcggggccgggagtgggcggcaagatgtccgagcggccc
ctgcactcgctgaagaggaagtccaccttcatctcccccatccccgccaagaagaggaac
ctggttctgcggagcaacagcggcggcgtgaaggaggagaagcccgagggtccccccagc
ctcttcaagaagatgcctgtggccaagaaggtgaaagctaagctgccccccaagagcccc
ggtgaagccatcccgaaaccccccctgccaaaggaggcccctgacgtctgcatcaagatc
acctcccgggcggccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggc
cgcggcctcaagctggaggccatcgtgcagaagatcacctcgcccaacctgaagaagttc
gcctgcaagccggcagccacggcagcagcggcagcggtggcagcgacggcagcagccact
tacggcacctccctgagcccagcgggggcagaccgggagcgagcggtgaagcacggcggc
gtggccctggcggtgggcgacgcgcggttgcccaaaccggcagcagcgcagaaagcaccc
acagcaccatcagctgagcagttctgccgaaacccccacggtagagcgctgaaggggaag
ccagggagcgggaagaaactctccgccaacggcttccagggtgagacctgtgtgccggcc
atggtggcacagcccggctcggcggtggtggccaagaacatggcgctgctgcccaagaag
aggaaccgcaagggcaaagcggcagcgctgggcatggccaaggcacccctgggccccacg
ctgccactgccgccccgcgagcgggcagccgggccgggcggcggggacgaggcaccgcgg
gagggcaagaaaccaaagagcgaggagaaggaggcggggggtggcgagggcctcgaggga
cgtgcggcaggcgggccggcacgagggccgaagccgcgggccaaccacgccaactacaac
ggctactccaagcggcagcggaagcgtctggcccacggcaaggccaaggcggtgccgtcg
cggtgcaagagccggggcaagcggcggcggcaagcccagcaagtgccactgctgcacccc
gccgagcccgagatccgcctcaagtacatctcctgcaagcggctgcgggccgacagccgg
gccccccccttcgcgccctacgtccgcgtggagcggcacggcgagttcaccaccgcctgc
accgtcgtcaactcgcccggtgacgaggcccggctgcagcgggggcccgccagcacggcg
ccgcggccgcgggcggcactgcctgcctcgtccaccatgcacctggggcccgtggtgtca
aaggcgctgagcgccgcctgcctggtctgctgcctgtgccgaaaccccgccaactacaag
gacttgggggacctgtgcgggccctactaccccgaggactgcctgcccaagaagaagtcg
cgtctgaaggagaaggcgcgggcggagggcgaggaggccggcgtggcggagcgcgggcca
aaagggacggagagcagctgggcggccggcggcaagccgccaaggccggagggtgccgcc
gaggccgccaagcagagctcgctccgctccagcccccggggcatgtttcgcaggctgcag
agctgctactgctgtgacgagaggacagagggcgaggaggcggccgaaaagccccggagg
cacgaatgtaacaaagctgagtccccgccgcaggagccggcgggcgacacgcaggagcac
tggctgcacgaggcctgtgccatatggaccgctggggttttcctggtggcggggaagctc
tacgggctgcaggaggccatcaaggtggctgccgacgtgaagtgctcgagctgccagcaa
gcgggcgccacggtgggctgctgccagaaggggtgtccccacacctaccactacgcgtgt
gccattgacacaggttgcttactaaccgaagagagcttctctctgcgatgtcccaaacat
aaggtaagcccggagcccttgaggcagcccgtgtag
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