Cygnus atratus (black swan): 118256395
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Entry
118256395 CDS
T09349
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118256395 (CACNA1H)
04020 Calcium signaling pathway
118256395 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118256395 (CACNA1H)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118256395 (CACNA1H)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
118256395
NCBI-ProteinID:
XP_050569730
LinkDB
All DBs
Position
15:2528171..2753750
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AA seq
2440 aa
AA seq
DB search
MSDGESREPRAAGGEVRVPIPVAPRRPTEPPPEDAGPGPGGSPGPGGSPGRDPPPELASE
EEEQVPYPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCED
VECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMME
YSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFG
IVGVQLWAGLLRNRCFLDRNLATTYNLTFLHPYYRTDEAEENPFICSSHRENGMQKCSNI
PNRKEYKVECTLSMDSYTPSLYNPDLSSRNACINWNQYYNVCMAGDVNPHNGAINFDNIG
YAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSET
KQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTIRLYNNWQSK
RRKKVNPNSTTNGQNCRGKKRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSNPEICDLE
LKVMKPGGKLMLPSSSPNLQSPAPPPDSESVHSIYHADCHVEGPQVNCKSSNAPASIKLT
AGLSSHGSNYPTILPSPTSKGSSVPVPKGKKNGNSPVAVVNSPVNFGTDSYGKLQQLVGE
HGLRRTSSRLSGLSAACPLPSPPGGTLTCELQDCPFCASLLEDPEFAFSESDSCDSDSNG
VYEFTQDLRHGDHRDQLQQQRSRRRKKKKKPKERNKVTRLWKAFGSKLKRIVESKYFNRG
IMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYN
IFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATF
CMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNV
VLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANF
DDDFEKLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVH
TFVDSRRGSNASIDPMSYDQKSLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAPSLKKKN
QSGERESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAESLDYRSSLDLPELLQLPTMRH
SLSISPMAVLPAEYQDCNGKMVHVPSEFFLRIDGHKEEAMDYEDDMEDSYCYRIRKVLEP
YKPEWCKSHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDP
HSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDII
VSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAF
FIIFGILGVQLFKGKFYYCDGPDVKNITTKTDCTNARYKWVRRKYNFDNLGQALMSLFVL
SSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHK
CRQHQEAEEARRREEKRLRRLEKKRRSKEIYLSEAQRRPYYADYSPARKYIHSLCTSHYL
DLFITFIIGINVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKD
RWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALL
DTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFL
TLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVL
MKHLEESNKEAKEDAEMDAEIELEMSRGATTSATSGSRGGAVAPDSRAPYRSQEAMKSES
AAQAKHQALVGTASLRPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPLHEVE
METYPCKSQRGSITSIRSQPVGACSSSLRVPTESLQLAARSPNHDGRHRWKILPPHIMPR
SPTLNKLLCRQEAVRTDSVDGQTPDPKDSLQAEPGETLPSAKQPQSTFTPSPLHPTASSL
PATPPRSPPSSPHRHPGTLARKHGCGQRGVPSRPASPGSGPPSPEGCLVEPSDLADEEVR
HINSSAKDWGEHSEAGSHSTSPFISPAPSPVPLKNCSTSSLSGGGTKEKDLKKFYSIDTK
GFLNKPSWADDQRRHSIEICPSISDGDCSFEDPAEEKQRSPAHIQPESEYIHGARRKKKM
SPPCISIDPPMEDDGGAASRTKPSENSMLRRRTPSCEFPAYRESLELAESQPGGEPASKA
ERRGQPPCRGEHLAIPNFSFEQSDGSSLSSLSDLLDSGQSTPDSRPDPAAPELKKADHLK
TQWSSAEKSKELLGTAKSPLRKQDLVPVTVATEEDIDEPV
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatggcgagagccgagagccgcgggcggccggcggcgaggtgcgggtgcccatc
ccggtggcgccccgccgccccaccgagccgccgccggaggatgccggccccggccccggc
ggttcccccggtcccggcggttcccccggccgcgacccgccgcccgagctggcctccgag
gaggaggagcaggtgccgtacccggcgctggcacccaccgccttcttctgcctcaagcaa
accacccgcccgcgcagctggtgcctcaggctggtctgtaacccctggttcgagcacgtc
agcatgctggtcatcctcctgaactgcgtcaccctgggcatgttccagccctgcgaggac
gtggagtgccagtcggagcgctgcaccatcctggaggcatttgacgacttcattttcgct
ttctttgcggtggagatggtcatcaagatggtggctctggggatcttcgggcagaagtgt
taccttggagacacgtggaatcgcctggacttcttcatcgtgatggcgggcatgatggag
tattccctggacggacacaacgtgagcctgtcggcgatccgcaccgtccgcgtgctccgg
ccgctccgagccattaacagggtcccaagtatgcgaatactggtcaccctgctgttagat
actctgcctatgttaggcaacgtcctcctcttgtgcttctttgtcttcttcatctttggg
atcgtcggtgtgcagctctgggcagggctgctgagaaacaggtgtttcctagacaggaat
ttggcaacgacgtacaacctcaccttcctgcatccgtactaccggacagacgaagcggag
gagaatccgttcatctgctcatcccatcgtgaaaacggcatgcagaagtgctccaacatc
ccaaacaggaaggagtacaaggtggagtgcaccttgagcatggactcctacaccccaagt
ttatacaaccctgacttgagcagcaggaatgcctgcataaactggaaccagtattacaac
gtatgcatggcaggggacgtaaacccacacaatggagctatcaattttgataatattggc
tatgcctggatagctatatttcaggttataaccctggaaggatgggttgacatcatgtat
tatgtgatggatgcacattctttttacaattttatatattttatattacttataatagtt
ggttccttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaaca
aagcagcgggagaaccagctgatgcaggagcagcgggcccgttatctctccaatgacagc
acaatcgccagcttctcggagccaggtagctgctacgaggagctgctcaagtacatctgc
cacatcttcaggaaggtgaaacggcggacaatacgcctgtacaataactggcagagcaag
cgcaggaaaaaagtgaacccaaacagcaccacgaatgggcagaactgccgaggcaaaaag
cgcatcacctccatccaccacctcatccaccaccatcaccaccaccatcaccaccactac
cacatcagcaacgggagccctcgggggccgcgctccaaccctgagatttgtgacttggaa
ctcaaggtcatgaagcctggaggcaaactgatgcttccttcctcatcacccaacttgcag
agccctgcacctcctccagattcagagtctgtgcacagcatttaccacgcagactgtcac
gttgaaggaccacaggtgaactgtaagtcttccaatgcccctgcaagcattaaactgact
gctggactctccagccatggcagcaactaccctaccatcctgccttctccaacgagcaaa
ggcagttcagtgccagttcccaaaggaaagaagaatggcaactcacctgtggcggtggtt
aacagccctgtaaattttggcacagattcttatgggaagctgcagcaactggtaggagag
catggtctgcggcggacgtccagccggctgtcggggctgagcgcagcctgcccgctgccc
agcccgccgggggggacgctgacctgcgagctgcaggactgccccttctgcgccagcctc
ctggaggaccccgagttcgccttcagcgagtccgacagctgcgactccgacagcaacggc
gtctacgagttcacccaggacctgcggcacggcgaccacagggaccagctccagcagcag
cgcagcaggaggaggaagaagaagaagaagcccaaggagaggaacaaggtcacacgcctg
tggaaggcgtttggcagcaagctgaagaggatcgtggaaagcaagtacttcaaccggggg
attatgatcgccattctcatcaacacgctgagcatgggcatcgagtaccacgagcagcca
gacgagttgaccaacgccttggagatcagtaacatcgtcttcacaagcatgtttgccctg
gagatgctcctgaaactccttgcctttggcctcttcggctacatcaagaacccgtacaac
atctttgacgggatcatagttgtcatcagcgtctgggagatcatcggccagtcagacgga
ggcctttctgtgctgcgaacttttcggctgctccgggtgctgaaactggtgcgtttcatg
cctgccctccgccgccagctggtggtcctgatgaagacaatggacaacgtagccaccttc
tgcatgttgctcatgctcttcatctttatcttcagcattcttggcatgcatctttttgga
tgcaagttcagcctgaaaactgatacaggagacacagttccagatagaaagaattttgat
tccttgctttgggccattgtgacagtgtttcagatcctcactcaagaggactggaatgtg
gtcctatacaatgggatggcatctacatcctcatgggcagcgctctacttcgtggccctg
atgacctttggcaattatgtgctcttcaaccttctggttgccattctggtagaaggcttc
caggcagagggggatgccaataggtcagacacagatgaggacaagacatctgccaacttc
gatgatgattttgagaagctgaaagaccttcgagcaacagagatgaagatgtactcactt
gctgtcacaccgaatgggcacctggagggcaggggaagcatgccacctcctatcatcatg
cgcacagctgccacaccaatgcccacgccaaagtgttccccacacatggattcagtgcat
actttcgtggactcaaggagagggagtaatgcttcaatagatcccatgagctacgatcag
aagtccttgtccagcctccgcagttccccttgtgccaactggggcaccagcagcaactgg
ggaagtcgacgctcaagctggaacagcctgggcagagccccgagcctcaagaaaaagaac
cagtcgggagaaagagagtccctgctctccggggagggcaaaggcagcacagacgacgac
tctgacgatgccaagtccagcacggtcagcaggccctccctgcaccgccgggcagagtcc
ctggattaccgcagctccttggacctgcccgagctgctgcagttgcccaccatgcgccac
tcgctcagcatcagccccatggcagttctgcctgctgagtaccaggactgcaatggcaag
atggtgcacgtccccagcgagttcttcctgcgcatcgatggccataaggaggaggccatg
gactatgaggatgacatggaggatagttactgctaccggattcgtaaagtcctcgagccc
tacaaaccagagtggtgcaagagtcacgaagactggtccctctacttgttttccccacag
aatcggttccgagtgatgtgccagaaggtcattgcccacaaaatgtttgatcatgtggtg
ctggtcttcatatttctcaactgcatcactatagcgctggagagaccagacatagaccca
cacagcacagaaaggatattcctgagtgtttctaattatatcttcactgcaatcttcgtg
gctgaaatgatggttaaggtagtagctcttggctttttctctggggagaacacctatcta
cagagcagctggaacgttctggatggagtcctggtcttcgtatctatcattgacattatt
gtctccatggcatcagcaggcggagctaagatcctcggtgtccttcgtgttttgagactt
ctgcggaccttgagacctctccgagtcatcagtagagccccaggtctgaagctggtggta
gaaaccttgatctcctccttgaggcctattgggaatatcgttctcatctgctgtgctttc
ttcattatctttgggattttaggggtacagctttttaaaggcaaattctactactgtgat
ggtcctgacgtgaaaaacatcactacgaagactgactgtactaacgcacgctacaaatgg
gttcgacggaagtacaattttgacaatttgggacaggccctcatgtccttgtttgtcctc
tcctccaaagacggttgggtgaacatcatgtatgatggtctggatgctgtgggtattgac
caacagcccatccagaaccataacccttggatgcttctctacttcatctccttcctgctc
atcgtcagcttcttcgtgctcaacatgtttgtgggggtggtggtggagaacttccacaag
tgccgacagcaccaggaggcagaggaggcccggcgtcgggaggagaagcgtctgagacgc
ttggagaaaaagcgcaggagtaaggagatatacctgtctgaagcccagcgcaggccttac
tatgcggactattctccggcacggaagtacattcacagcctctgcaccagccactacctc
gacctcttcatcacgttcattattggcatcaatgtcatcaccatgtcaatggagcactac
aaccagccaaagtccctggatgaagccctgaagtactgcaactacgtgttcaccatagtt
tttgtgtttgaggcagttctgaagttggtggcatttggttttcgaaggttctttaaggac
aggtggaatcagctggatttggccatagttctcttatcaattgtgggaatcacactggag
gaaattgagatgaatgctgcactgcctatcaatcccacaataatacgcatcatgcgggtg
ctgagaatagcaagagtgctgaaactgcttaaaatggccaccggaatgcgagctctcctg
gacacagtggtacaagcacttccccaggtagggaaccttggcctactttttatgctcctg
ttttttatctatgctgccctgggagtggaattgtttggcaagctagactgcagtgaagaa
aatccgtgcgaaggtctgagccggcacgcaactttcaccaacttcggcatggccttcctc
accctcttcagggtgtcaacgggggacaactggaatggcatcatgaaggataccctccgg
gagtgcactcgggaagacaagcactgcctcagttacctgcccgttatctctcctgtctac
ttcgtcacctttgtcctcatcgcacagttcgtcttggtcaacgtggtggtggcagtgctg
atgaagcacctggaggagagcaacaaggaggccaaggaggatgctgagatggatgctgag
atcgagctggagatgtccagaggagcaaccacgtcggccaccagtgggagcaggggagga
gcggtggccccggacagcagggcgccctacagaagtcaggaggccatgaagtcggagtca
gcagcgcaggcgaagcaccaagccctggttggcacggccagtctgcggccacaggactct
caaaacctcctgacggtccgtaagatctccgtatcccgcatgcactccttgcccaacgac
agctacatgttccggcccgtcatgccagccaaagcccccttccccctccacgaggtggag
atggagacgtatccctgcaaatcccagcgagggtccatcacctccatccgctcccagcct
gtgggagcgtgttcctcctctctgagagtcccaacggagtccctccagctggccgcgcgc
tctcccaaccacgacggccggcaccgctggaagatccttcccccccacatcatgcctcga
tctcctactctcaacaagctgctgtgcagacaggaggctgttcggacggactctgtggac
gggcagacaccggatcccaaggacagcctgcaagcggagccaggagagacgctaccgtcg
gcgaagcagccccagagcaccttcacccccagccctctccaccccacggcctcctccctg
ccagccacccctccacgttcccctccatcctccccacatcggcaccccggcacgctggcg
cggaagcacggctgcggccagcgcggggtccccagccggccggccagccccggcagcggc
ccccccagccccgagggctgcctcgtggagccctccgacctggccgacgaggaggttcgc
cacatcaacagctcagccaaagactggggggagcactcggaggctgggagccactcgact
tcgccgttcatctccccggccccgtcgccggtgcccctcaagaattgcagcacaagcagc
ctctccgggggcggcaccaaggagaaggacttgaagaagttttacagcatcgatacaaag
ggcttcctcaacaagcccagctgggcagacgaccaaaggcggcactccatcgagatctgc
ccctccatcagcgatggagactgtagctttgaggaccctgccgaggagaagcagcggtcc
cctgcccacatccagccggagtccgagtacatccacggagcccggaggaagaagaagatg
agcccgccctgcatttctatagatcctcccatggaggatgacggcggggcggcctcgcgc
accaaaccctccgagaacagcatgctgcgccgaaggaccccctcctgcgagttcccggct
tacagagagtccctggagctcgcggagagccagcccgggggggagccggcctccaaagcg
gagcgccggggccagcccccgtgccgcggggagcacctggccatccccaacttctccttc
gagcagtcggacggcagctccttgagcagcctctcggatctcctggacagcgggcagtcc
acgccggattcccggccggaccccgcggcccccgaactgaaaaaggcggatcacttaaaa
actcagtggagcagcgctgagaaaagcaaagagctcctcggcaccgccaagagccccctc
cggaagcaggacttggtgcccgtgactgtcgcaacagaagaagacatcgatgagccagta
tag
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integrated database retrieval system
