Cygnus atratus (black swan): 118256449
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Entry
118256449 CDS
T09349
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118256449 (RBBP6)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118256449 (RBBP6)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
U-box type E3
118256449 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
118256449
NCBI-ProteinID:
XP_035419310
LinkDB
All DBs
Position
15:complement(930882..962449)
Genome browser
AA seq
1978 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMAREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETAFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEDPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQPPPPP
PPPPLMRQTITRNLQPLMRPTISRQQDPLMIPLASLSSHSAALAPGQPVAAALPVNPSSV
IVSDLPPAVSLSLRAEKPDGPFHDADAVIPPALMTAAELSKSSPLSISSLLEEKGYQVPV
LRQPALQSLLGPQGQSIPTTGHPMRAGTIRSAGGRPGWELSSNRGRPHSERTQRTQAPTL
PASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAPA
NMSSAWVPTAVPTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKEL
MEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSR
SPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTIPQGE
GEREYFNRYREVPPYDIKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQP
RPPVNRENFSPDRFGPPGTRRENSPYARGRREDYAGGQSHRNRNIAGNYPEKLSGRESHG
IKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPTAELLDSARKPREPGTAEDV
KTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIDKAKRKAEVAAPP
KKDNIIKPAKASQEKVDTDREKSPRIEPPVKKVKEELPKADSVKTSSSQKDEKATGTPRK
VHPKVTKDHPETRPAKEEKTKKDHTKEIKSEKPSNKEDKSKKTVEKGKPSDAKAEKRKRK
ADEKVDKEHEATSIKASKPESAESKTSPKGKTEPDGEKGERTPEKDKSAFLTTPAKKIKL
NRETGKKIVSGENVPPVKEPVEKAEPSSSKVKQEKVKGKARRKVTAADGSGSTLVDYTST
SSTGGSPVRKSEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEE
DIKSTQPPSNIGKPASVVKNVSSKPSNPVKHNEKETEPLEKTQKTTKELSYESSQHDAKS
SKSSMSNEKGKTKERDHSLSDKDASEKRKSSVQPEKDHSERATEQGNGKNISQSSKDGRS
SDKHDSGRGSTAKDFTPNRDKKSDHDSNREHSSSKRRDEKSELARRKDSPSRNRESTSGQ
KSKPRDERAECSKKGTGDSKRSSYSPLRDRKQSDHKTTHDSKRSLEEHKPLDKNSGKEKE
KEKEKEKEKEKEKEKEKEKEKEKEKEKEKEREKEKEKEKEREKEKEKEKEREKEKEKEKE
REKEKEKEKEREKEKEKEKEREKEKEKEKEREKEKEKEKEREKEKEKEREKEKEKEREKE
KEKEREKEKEKEREKEKEKEKEKEKEREKEKEKEREKEKEKEREKEKEKEKEKEKEKERE
KEKEKEKEKEEKEKEKDKHMSEIKSNKEKELGCNKPPLRQESPDAKNEKENMTGQNDKTG
VKPKPQVSNPSRLSSDPTRETDEAAFVPDYNESDSESNVSAKDEETVGKNSKELKEKAVD
KVKEDTAAPATVDQPEAGRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKK
KKKEKKKHKKHKKHKKHKKHTGNESELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTI
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcactacaagttctcgtccaagctcaactatgacacggtcaccttcgac
ggcctccacatctccctgtgcgacctcaagcgccagatcatggcccgcgagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcccagaccaaagaagaatacacagacgat
aatgccctgattcctaagaactcgtcagtaattgttagaagaatccctattggaggagtt
aaagctaccagcaaaacatacgttatgactcctaaatcgcacaaaatcctagaaactgct
ttcagaagtcgaactgaaccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgaa
gaagataaaataaaagctatgatgtcacagtctggccatgaatatgatccaatcaattac
atgaagaaacccttgggtccacctccaccatcatatacttgctttcgttgtggaaaacct
ggccactatatcaagaactgcccaacaaatggggacaaaaattttgagtctgttcccagg
attaaaaagagcacaggaattcccagaagtttcatgatggaagtgaaagatcctaacaca
aagggtgctatgctaacaaacactggaaaatatgcaataccaacaattgatgcggaagct
tatgctataggaaagaaagagaagcctcctttcttgccagaggatccatcctcctcctct
gaagaagatgatcctattccagatgagttgttgtgtctgatttgtaaagatataatgaca
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtatcagaacagca
ttactggaatctgaggaacatacatgcccaacatgtcatcaaacagatgtgtctcctgat
gctttaattgccaacaagttcttacgccaggctgtgaacaacttcaaaaatgaaactggc
tacaccaaaagactccgtaagattcagcagcaacaacagcagcagccaccaccaccacca
cctccaccaccactgatgagacaaacaataacacgcaacctgcagcctctaatgaggcca
acaatttccagacagcaagatccactaatgattccattagcttctctgtcttctcattct
gctgctttggcccctggtcagcccgtggcagctgcgctgccagtaaatccatcttctgtc
attgtctctgatcttcctccagccgtgtccctgtctctccgcgctgaaaagccagatgga
ccttttcatgacgcagatgctgttatacctcctgctctgatgaccgccgctgaactttct
aaatcttcccctctgtcaatcagcagtttgttggaagaaaagggttatcaggttcctgta
ctaagacaaccagcattacaaagtcttctgggcccacaaggacaatcaatacccacaact
ggtcatcccatgagagccggtacaattcgctcggcaggcggcaggccaggttgggaacta
agttcaaatcgaggacgcccgcatagtgaacgtacacaaaggactcaggccccaacactg
ccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctccacctccc
catgcacttcctcttccaccgggggtaccaccaccacagtttcctcctcagtttccacct
ggtcagcctccatcagctgggtacactgtcccccctccaggatatcccccagctcctgca
aacatgtcatcagcttgggtaccaacagcagtaccaacggctcattcaaataccatccca
acgacacaagcacctcctttatctagggaggagttttacagagaacaacggagacttaaa
gaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaattg
atggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtctccc
tatagtgcttcatcttactctagaagttcatatacctactccaagtcaagatcaggttct
tcccgctcccgctcctactctcgatcatttagtcgttcccattctcgttcctactcgcga
tctcctccgtatccaagaagaggcaaagggaagagtcgtaactatcgttctaggtcaagg
tcacatggttatcaccgttcaaggtcaaggtcacctccatacagaagataccattctcga
tcaaggtctccagtatttagaggccagtctcccactaaacggactataccacaaggggaa
ggagaaagggagtattttaacagatacagagaagttccaccatatgatataaaagcttac
tatggcagatctgttgactttagagatccttttgaaaaggaaagatacagagaatgggaa
aggaactatagagaatggtatgaaaagttctacaagggctatgctgttggtgctcaacct
cgacctccagtaaatagagagaacttttctccggataggtttggtccacctggaaccaga
cgagagaattcaccatatgctcggggacgtagggaggattatgctggtgggcagagccat
agaaatcgtaatatagctggaaattaccctgaaaaactttctggaagagagagccatggt
ataaaagatcctacaaaatcaaaagaaaaggaggttgaaaatccattgggagacggcaaa
ggaaataaacataaaaaacaccggaagaggagaaaaggggatgagaatgaaggttttccc
actgctgagttgttagacagtgcaagaaaaccaagagaaccaggtacagcagaagatgtt
aaaacagactctctgttcatgctcccaagtagagatgatgccacacctgtgagagatgaa
cctatggaagcagattctattgctttcaaaccagtgtctgaaaaggagaaaaaagagaag
gataagccaaaagcaaaaatagacaaggcaaaacggaaagcagaagtggctgctcctcct
aaaaaagacaatataataaaaccagctaaagcttcccaagagaaggtggacaccgatcgt
gaaaaatcgcctcgaatagaacctcctgtgaaaaaagtgaaggaagagttgccaaaggca
gacagtgttaaaacgtcttcctctcaaaaggatgagaaggctactggtacaccacggaaa
gttcatccaaaagtgacaaaggatcacccggaaaccagaccagccaaggaagaaaagaca
aagaaggaccatacaaaggaaatcaagtcagagaaaccctccaacaaagaggacaagtca
aaaaaaactgttgaaaaaggcaaaccttctgatgcaaaagctgaaaaaagaaaaagaaaa
gccgatgaaaaggttgataaagaacacgaagcaacttcgataaaggcctctaaaccagaa
agtgctgaatcaaaaacatcaccaaagggaaaaactgaacctgatggtgaaaaaggagag
agaactccagaaaaggataaatctgcttttcttaccactcctgcaaaaaagattaaactt
aaccgagaaactggcaaaaagattgtgagtggagaaaatgtgccacccgtgaaagaacct
gttgagaaagctgagccaagcagcagcaaagttaaacaagaaaaagtgaaaggaaaagcg
agaagaaaagtaacagcagctgatggatctggttcaactcttgtagattataccagtaca
agttctactggaggaagccctgttagaaagtctgaagagaagccagatacaaaacgaact
gtcatcaagacaatggaggagtataataatgatataactgctcctgctgaagatgtcatt
attatgatccaggttcctcagtcaaagtgggataaggatgactttgagtctgaagaggaa
gacattaaatctacccagcctccttcaaacataggaaaacctgctagtgttgtaaaaaat
gtgagtagtaagccttcaaatcctgtaaaacacaacgaaaaagagactgagcctttggag
aaaacacagaaaactacaaaagagttgagttatgaaagctcccagcatgatgcaaaaagt
tcaaaaagttcgatgtcaaatgaaaaagggaaaaccaaagagcgagatcattctctgtca
gacaaggatgcttctgagaagagaaagagcagtgttcagccagaaaaagaccactcagaa
cgtgcaactgaacaaggaaatggaaaaaatatttctcaatcttccaaagacggtagatct
tcagacaaacatgattctggccgtggatccactgctaaagactttactcctaaccgagac
aaaaaatctgaccatgatagcaacagagagcattctagttccaagcgtagagatgaaaaa
agtgaattagcaaggagaaaagactccccttctcgaaacagagaatctacatcaggacaa
aaaagtaaaccaagagatgaacgagcagagtgctccaaaaagggcactggagattccaaa
aggagcagctacagtcctctacgtgaccgaaagcagtcagatcacaaaactactcatgat
tccaagcgttcattagaggagcacaaacctctagataaaaattcagggaaggaaaaggag
aaggagaaagaaaaggagaaggagaaggaaaaggaaaaggagaaagaaaaggagaaggag
aaggagaaggagaaagaaaaggaaaaggagagggagaaggagaaagaaaaggaaaaggag
agggagaaggagaaagaaaaggaaaaggagagggagaaggagaaagaaaaggaaaaggag
agggagaaggagaaagaaaaggaaaaggagagggagaaggagaaagaaaaggaaaaggag
agggagaaggagaaagaaaaggaaaaggagagggagaaggagaaagaaaaggagaaggag
agggagaaagaaaaggagaaggagagggagaaagaaaaggagaaggagagggagaaagaa
aaggagaaggagagggagaaagaaaaggagaaggagagggagaaagaaaaggagaaggag
aaagaaaaggagaaggagagggagaaagaaaaggagaaggagagggagaaagaaaaggag
aaggagagggagaaagaaaaggagaaggagaaggaaaaggagaaggagaaggagagggag
aaggaaaaggagaaggagaaggagaaggaggagaaagaaaaggagaaggacaagcacatg
tctgaaataaagagcaataaagaaaaagagttgggttgcaataagccacctttgagacaa
gaatcaccagatgcaaaaaatgagaaagaaaacatgactggacaaaacgataaaactggt
gtcaagcctaagcctcaggtgagcaacccctcacggctgtcttctgatccaactcgagaa
actgatgaggctgcatttgtaccagactacaatgaaagtgacagtgaaagtaatgtatct
gcaaaagatgaggaaactgtaggaaaaaattctaaagaattgaaagaaaaagctgttgat
aaggttaaagaggatacagcagcacctgccacagttgaccagcctgaagcaggcagaagt
caaagtcaaagcagccccagcgttagccgcagtcgtagtcaaagcccttctgagagtcaa
actcgaagccacagcagcagtgccagctcaggagagagtcaagacagcaagaaaaagaaa
aagaagaaagagaagaagaagcacaagaaacacaaaaaacataagaagcataagaaacac
accggaaatgaatcagaattggagaaaagccaaaaacacaaacacaagaagaaaaaatca
aagaagagcaaagataaagagaaagatgaccaaaaagttaaatctgtcactatatag
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integrated database retrieval system
