Cygnus atratus (black swan): 118256490
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Entry
118256490 CDS
T09349
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04120
Ubiquitin mediated proteolysis
cata04137
Mitophagy - animal
cata04144
Endocytosis
cata04340
Hedgehog signaling pathway
cata04350
TGF-beta signaling pathway
cata04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118256490 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118256490 (SMURF1)
04350 TGF-beta signaling pathway
118256490 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118256490 (SMURF1)
04137 Mitophagy - animal
118256490 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
118256490 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118256490 (SMURF1)
04121 Ubiquitin system [BR:
cata04121
]
118256490 (SMURF1)
03029 Mitochondrial biogenesis [BR:
cata03029
]
118256490 (SMURF1)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118256490 (SMURF1)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118256490 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
118256490 (SMURF1)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
HECT type E3
118256490 (SMURF1)
Mitochondrial biogenesis [BR:
cata03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118256490 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
118256490
NCBI-ProteinID:
XP_035419397
LinkDB
All DBs
Position
15:3820031..3867353
Genome browser
AA seq
737 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGFPIFRTVYEDSGPGRPLSCF
MEEPAPYTDTTGAAGGGNCRFVESPSQDQRLQAQRLRTPEVRGHVQTPQNRPHGHQSPDL
PEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRI
YFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQ
KLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDY
GGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAV
FHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHN
AFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLL
KPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQF
VTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKL
YEKLLTAVEETCGFAVE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacgcggcggaacggctccagcatcaagatccgcctcacagtgtta
tgtgccaagaatcttgcaaagaaagatttcttcagacttcctgacccatttgcgaaaata
gttgttgatgggtcaggtcagtgccattcaactgacactgtgaagaacacgttggacccc
aaatggaaccagcattatgatctatatgttggcaagacggattccataaccatcagtgta
tggaaccataaaaaaatccacaagaaacagggagctggcttcctggggtgtgtccgactc
ctctccaatgccatcagcaggctaaaagatactggataccagcgtttggatctatgcaaa
ctaaatcccacagatactgatgctgtacgaggccaaatagtggtcagtttacaaacacgg
gacagaataggcacgggaggttctgtagtagactgcagagggcttttggagaatgaaggt
ttccccattttcagaacggtctatgaagattctggaccaggaaggccactgagctgtttt
atggaggaaccagcaccgtatacagacactacaggggctgctggtggaggcaattgtcgc
ttcgtagagtccccaagtcaagatcagaggcttcaggcacagcgacttcggactcctgaa
gtcagaggtcatgtacagacacctcagaacagaccacatggtcaccagtctcctgaccta
ccagaaggctatgaacaaagaacaacagtacagggacaggtttattttttgcacacacag
actggagttagcacatggcatgaccctaggataccaagagaccttaacagtgtgaattgt
gatgaactaggacctttgcctccaggttgggaagttagaagtacagtttcaggaagaata
tattttgtagatcataacaacagaaccacacaattcacagatccgcgactacatcacatc
atgaaccatcaatgccagctaaaagagcccagccagcagcctctgccagctccaaatgag
gggtcactagaagacggtgaggaattgcctgcacagagatacgaaagagatttggtacaa
aaattgaaagttcttagacatgagctctcccttcagcaaccgcaagctggtcattgccgc
attgaagtatccagagaggaaatatttgaggaatcctaccgtcagataatgaagatgagg
cctaaggacttgaaaaagaggcttatggtaaaatttcgaggagaggaaggcctggattat
ggaggagtagcaagagaatggttgtatttactgtgccatgaaatgttgaatccatattat
ggactcttccagtactctacagataatatttacatgctgcaaatcaatccagactcttct
atcaatcctgaccatttgtcttatttccattttgttggtcggataatgggtttggctgtg
ttccatggacactatattaatgggggtttcacagttcccttttacaaacagcttctgggg
aaacccattcagctctctgatctggaatctgttgacccagaactacacaaaagtttagtc
tggattttagagaatgatatcaccccagttctggaccacactttttgtgtggagcacaat
gcttttgggcggattttacagcatgaactcaaaccaaatggcaggaatattccagtgaca
gaagagaacaagaaagaatatgtcaggttatatgtaaactggcgatttatgagaggaata
gaggcacagttcttggctctgcagaagggttttaatgaacttattcctcaacatctcctc
aagccttttgaccagaaggaacttgagctaatcataggaggcctggataagatagacctg
aacgactggaagtcaaacacacgtctaaagcactgcatggcagatagcaatattgtgaag
tggttctggcaagcagtcgaaacatttgatgaagaaagaagggcaaggctgttgcagttt
gtgacaggttcaacgcgtgtcccacttcaaggtttcaaggctttacaaggttctacaggc
gctgcaggccccagactgtttaccatccatttaatagatgcaaacacagacaaccttcca
aaagcccacacttgctttaaccggattgacattccgccttatgagtcatacgagaagctt
tacgagaagctgttgacagctgtggaagagacatgcgggtttgctgtggagtga
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