Cygnus atratus (black swan): 118256499
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Entry
118256499 CDS
T09349
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03015
mRNA surveillance pathway
cata05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118256499 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118256499 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118256499 (CPSF4)
03019 Messenger RNA biogenesis [BR:
cata03019
]
118256499 (CPSF4)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118256499 (CPSF4)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118256499 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
118256499
NCBI-ProteinID:
XP_035419417
LinkDB
All DBs
Position
15:complement(3713938..3721898)
Genome browser
AA seq
243 aa
AA seq
DB search
MQELIASVDHIKFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPQPTQTQQKRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccagcgtggatcacatcaagttcgacctggagctggccgtggag
cagcagctgggggcgcagccgctgccttttcccggcatggacaaatcaggtgcagctgtc
tgtgaattttttttaaaagcggcctgtggaaaaggaggcatgtgcccattcagacacatc
agcggggagaagacagttgtttgcaaacactggctacgaggactgtgcaaaaaaggagac
cagtgcgagtttctgcatgagtacgacatgaccaagatgcctgagtgttacttctactcc
aaatttggggaatgcagtaacaaagaatgtccattcttgcacatcgacccggaatctaag
atcaaagactgtccctggtatgacagaggcttctgtaaacatggtcccctctgcagacac
cgacacactcgaagagtcatttgtgtgaattacctagtaggattctgtccagagggacct
acctgtaaattcatgcaccctcggtttgaactgcctatgggaaccacagagcaaccacca
ctgcctcagccgacacaaacacagcaaaagaggacgccccaagtcatcggagtcatgcag
tctcaaaataacaacactgggaacagaggaccccggccgttggagcaagtaacctgttac
aagtgtggtgaaaaaggtcattatgccaacagatgcaccaaaggacatctggcctttctc
agtggacagtga
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