Cygnus atratus (black swan): 118256576
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Entry
118256576 CDS
T09349
Symbol
PCARE
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cata03037
]
118256576 (PCARE)
04812 Cytoskeleton proteins [BR:
cata04812
]
118256576 (PCARE)
Cilium and associated proteins [BR:
cata03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118256576 (PCARE)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
118256576 (PCARE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
TPR_TNPO3_IPO13_3rd
2OG-Fe_Oxy_2
Motif
Other DBs
NCBI-GeneID:
118256576
NCBI-ProteinID:
XP_035419556
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Position
3:104023823..104037297
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AA seq
1293 aa
AA seq
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MGCTPSHSEIVNTLARNGFKALNKPKGILRIDPADKGIPLLVKGSSCYNIDEFYQYKIQR
NSCLRETEEKLSEQDKSDYLQFSSKSHSDPHISREDNIIEKKATEAEVMSKFIESQKHII
EAVQIRKQSSCESEASASICDNKNESNTKQILKKGRKPKSHKLAKQGRPSKIKKKSILSP
CEIEKKVDFPELLVKAHQNAYAYLNPNLSKYEAILHMANQAAQTQLFLQQMVSFLMLRFD
EINQLLEEIANDGENLLKDAGRYLAWPSGKDDLKEHPDLLQQLLQYTINKMQLVSGTLAS
VTSDALQETCSYLQSAASNLEGKLKAKQSYDERLFRAVRLLEASSMGSSQSHGDDRTLYS
EDSGIGVDSESLKDFSPFSQLGAQASCESCAHGLMSQNHTRTMEHMHNGAMSPGTATSHG
CALEWHFKDTFYSSLWSREETSCQGEVPEGISAAAKYANLSKSHSSNSFQSDSTQEGEHF
ESTDFPSDDDEGSTLGEDDDNTSLSEMGKDALPKRPQSSPAVTDNTQRQLSTKRTENAET
EEMILKMKDAISEKIKFVPAKSGCKEWVEDESGTAILTARPSTAMGRQKASGKQRRSRSE
ESLRSQAEDPTLLELQRTQKELSKRLEMFYGKMDTDNNQEPRKLRKTRYLQDEQITSRSS
SKLKACLSKNFSILPNQDKVPLYMVDQNPANQLDEKRCKKPVRATVPTQETSGSKDDKTS
GTQILSGSSCAPRQSVKKLIETFSPTDDLEKATPLRSLGPIKCIRKFGLPVIPPSIPFQR
GLVPLNIKHRISPVEDTSLSNTSGVCSNFPNAFPPVPAAELNAETDVDTENLPPPPPEML
MDTSEFSEPEETARIGENSLEDAKKPAKTEFHATKRAQVSPKMKASLQSIDLLPSKSISP
SAVANKVSRNSGPRDEKLQIYSLELNPTNMHIPSQEEILATQRKEAADLYKQTHKIIPLQ
NPSGVSKPYDSSSESKEPNSPATSVPYQKHGSPDSLRRNEKCSSFNRRVSPARTPPSSPP
TEKQLFSPPVHHRRALQALSSQQLSSPTMQRKPSPPASPRAPSPPRGPSPPLQKKLPSPP
AQRKLLSPPAEHKQSSPTPHRLPGSPVYRREASPIPFLTAPSPPTSPSRSYRGSKAGLDA
GDEYQPASSKKGSNVHSIFCPATSSLFEARPPPAPSKPTVEVTKQPEASPPSQKSSLLLQ
QPVDRTRKLSLSAANPQPFVRRSFSDRRPGVRFYLPAPVTAGSEPALNQASVEESPGKAG
DCWSNPCAPEIKESNRSASHPELYIVGQGLQRD
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacaccatctcacagcgagattgttaatactcttgcaagaaatggttttaag
gctttgaataaacctaaaggtattttgcgtattgatccagcagataaaggaatcccactg
ctagttaaaggttcatcttgctacaatattgatgaattctaccaatacaaaattcagagg
aacagctgcctgagagaaactgaggagaaactgtccgagcaggacaaaagtgattatttg
cagttttcttccaaatctcattcagatcctcacatttccagggaagacaacataattgag
aaaaaagccacagaggctgaagttatgtccaaattcattgagtctcaaaaacacatcatt
gaggctgtacagatcagaaagcaaagctcttgtgaatcagaagcatcagcttccatttgt
gataataagaatgaaagcaataccaagcaaatcctaaagaaaggaaggaagccaaaaagt
cataaattagctaagcaaggtcgacctagcaaaattaaaaaaaaatcaattttgtcccca
tgcgagatagagaaaaaggtagatttcccagaactgcttgttaaggctcatcagaatgca
tatgcctacttaaatccaaacctctccaagtatgaagctatacttcatatggccaaccag
gctgcccaaactcagctcttcctacaacagatggtaagcttcctcatgcttcgctttgat
gaaatcaaccagctcttggaagaaattgctaatgatggggaaaatcttctcaaagatgcg
ggtagatatctggcatggccatcaggaaaagatgatttgaaggagcaccctgatcttctg
caacaactacttcagtacacaatcaataaaatgcagttagtgagtggaacactggcctct
gtcacctccgacgccctgcaggaaacctgcagctacctgcagtctgctgcaagcaacttg
gaaggaaaactgaaagcaaagcagagctatgatgagcgcctgtttcgggcggtaaggctg
cttgaagcctcaagcatgggaagctctcagtcccatggtgatgataggactctctattct
gaggatagtggcattggcgtggacagtgagtccctcaaagacttcagtcctttcagccag
cttggagcacaagcaagctgtgagtcctgtgcacatggccttatgtcccaaaaccacacc
agaacaatggagcacatgcataatggagcaatgtcaccaggcacagccacatcccatggc
tgtgcacttgaatggcattttaaagatacattttattcatctctatggagcagagaagaa
acttcttgtcagggtgaagtaccagaaggtatttccgccgcggcaaaatatgcaaacctg
agcaaaagccactccagtaactccttccagtctgattctactcaggaaggtgaacatttt
gaatcaacagattttccttcagatgatgatgaagggagcaccctgggggaggatgatgac
aatacaagtttatcagaaatgggtaaggatgccctgccaaagaggccccagtcttcacct
gcagtcactgataacacacaaagacagttgtccaccaaaaggacagagaatgcggagaca
gaggaaatgattctgaagatgaaagatgccatcagtgaaaaaatcaagtttgtcccagct
aaatctgggtgtaaagaatgggtggaggatgagagcggaacagcaatcctaacagcaagg
cccagtacagcaatgggaaggcagaaggcctctgggaaacaacgacggtccagatcggag
gagtccctcagaagccaggcagaggacccaaccctcctagagcttcagagaactcaaaag
gagctcagcaaaaggctagaaatgttttatggaaagatggatacagataacaaccaagag
cctcggaaactgagaaaaacacgttacttgcaggatgagcaaattacatctaggtcctct
agcaaacttaaggcatgcctctcaaaaaatttcagcatcctgcctaaccaggataaagtc
cctttgtacatggttgatcaaaatcctgccaatcagctggatgaaaagagatgcaagaag
cctgtcagagctactgtgcccacccaggagacatcggggagcaaagacgacaagacttct
ggaacacaaatactcagtggcagcagttgtgccccccgccaatctgtcaaaaagctcatt
gaaacattcagtccgactgatgatcttgaaaaagccacacctttaagatctttagggcca
attaagtgcatcagaaaatttggacttccagtcatcccaccctccattccatttcagaga
gggttggtgcctttaaatattaagcatcgtatttcaccagtagaagacacaagcctttca
aacaccagtggagtttgttctaactttccaaatgcctttcctcctgtaccagctgcagaa
ttaaatgcagaaactgatgtagacactgagaacctgccaccaccaccccctgaaatgtta
atggacacttctgaattctctgagcctgaagaaacagcaagaataggagaaaactctttg
gaagatgccaaaaagcctgccaaaacagaatttcatgctactaagagagcacaagtttcc
ccgaaaatgaaagcctccctccagtccattgacttattaccaagtaaaagcatcagcccc
agcgcagttgctaacaaagtttcaaggaatagcggacccagggacgagaaactgcagata
tactctctggagctgaaccctaccaacatgcacatccctagccaggaggagatattagca
acccagagaaaagaagctgcagatttgtacaagcaaacacataaaattattcctcttcaa
aatcccagtggggtttcaaaaccatatgacagtagctcagagagcaaagagcccaattca
cctgctacttcagtgccatatcagaagcatggttctcccgactcactgaggagaaatgaa
aaatgttcatcattcaacaggagggtctccccagcaagaacgcccccttcttctccacca
actgagaaacagcttttcagccctccagtacaccacagacgtgctctgcaggctttaagc
agccagcagctgagctcacccaccatgcagaggaaacccagtccccctgccagccccagg
gcgcccagcccaccccgggggcccagcccacccctacagaagaagctgccctctccacca
gcccagcggaaactgctcagccctcctgcggagcacaagcaaagttcaccaacaccacac
cggctgccaggctccccagtctaccgccgagaagcaagccccattccattcctcactgcc
ccatccccaccaacctccccatcccgctcctacaggggatcaaaagctggtctggatgct
ggggatgagtaccagcctgcttcctccaagaagggcagcaatgtacattcaatattttgc
ccagccacttcttccttatttgaagcaagacctccaccagcacccagcaaacccacagtg
gaagtcaccaaacagcctgaagcttcaccaccttcccaaaagagcagtctgctactccag
cagcctgtagaccgaaccagaaagctgtctctgagcgctgccaatcctcagccgtttgtg
aggagaagcttctctgaccgcagaccaggggttcggttttatcttccagctcccgtaaca
gctggcagtgaacctgctcttaaccaagcaagtgtggaggagagccctggaaaagcaggt
gactgttggagcaacccttgtgcccctgaaatcaaggagtccaacagatccgcttcccac
cctgagctctacattgtgggccaggggctgcagagggactga
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