Cygnus atratus (black swan): 118256634
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Entry
118256634 CDS
T09349
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04068
FoxO signaling pathway
cata04110
Cell cycle
cata04120
Ubiquitin mediated proteolysis
cata04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118256634 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
118256634 (SKP2)
04150 mTOR signaling pathway
118256634 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118256634 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118256634 (SKP2)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118256634 (SKP2)
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GFIT
Motif
Pfam:
F-box-like
F-box
LRR_6
LRR_At5g56370
LRR_4
Zn_ribbon_IFT122_C
Motif
Other DBs
NCBI-GeneID:
118256634
NCBI-ProteinID:
XP_035419657
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All DBs
Position
Z:12487413..12500476
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AA seq
419 aa
AA seq
DB search
MHRKHLQEIPSSGSNVSSGFAWDWESGRTAEFLSGMGVSVLKKDRLGSENTPQELLVAAC
SPHKRQKVKEKEKDFVIVRRPRLLREAEPGISWDALPDELLLAIFAYLPLNDLLKVSMIC
KRWHRLSFDESLWQTLDLASRNLLPGVIGQLLPAGVTVFRCPRSCIGNPLFKTMKPLRVQ
HMDLSNCTVSVADLQSILCRCERLVNLSLEGLVLSDDIVKSIAKNTSLIRLNLCGCSGFS
AEGLELMLSSCSMLEELNLSWCDFTATHVKAAVNHVTSKVTQLNLSGYRQNLQISDVKTL
VERCPSLVHLDLSDSVMLKPECFQYFHQLIFLQHLCLSRCYQISPAALVELGEIPTLKTL
QVFGIVTDSSLQLLKETLPDMKINCSHFTTIARPTVGAKKNHEIWGIKCRLTMRTHSGL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggaaacatcttcaggagatccccagctccggcagcaacgtttcgtctggcttc
gcctgggactgggagtcgggcaggaccgcggagttcctgtcgggcatgggggtgtcggtg
ctgaagaaggacaggctgggcagcgagaacaccccgcaggagctgctagtggccgcctgc
tccccgcataagaggcagaaggtgaaggagaaggagaaggacttcgtgatcgtgcgcagg
cctcggctgctccgagaggcagagccaggtatttcttgggatgcacttccagatgaactg
ctgttggcaatctttgcatatttgcccctaaatgatctgctgaaagtttccatgatttgc
aagagatggcatcgtctctcgttcgatgaatctctttggcagacccttgatctggcttct
agaaatctgctgccaggagtaattggacagttgctacctgcaggtgttactgtattccgc
tgcccaagatcgtgtattgggaatccactgtttaaaaccatgaaacctctccgagttcaa
cacatggatttgtcaaactgcacagtgtctgttgcagatctccagagtattctttgtcgg
tgcgaaagactggtgaatctcagcttggagggactagtgctttctgatgacatcgtcaaa
agcattgctaagaataccagtttgatacgactaaatctctgtgggtgctcagggttttct
gcagaaggcctggagttgatgttgagcagctgttctatgttggaggaactaaacttgtcc
tggtgtgactttacagccacccatgtcaaagcagcagtcaatcacgttacttcaaaagta
acccaactaaatttaagtggatacagacagaatctacaaatatcagatgttaaaaccttg
gtggaaagatgtccttctctcgtccatttagatctaagtgacagcgtgatgttgaagcct
gagtgcttccagtattttcatcaactcatatttctacaacatctgtgtcttagccgatgc
taccaaatatcgcctgctgccttagtagaacttggtgaaattccaacattaaagactctt
caggtatttggaatagtgactgatagctccctacagctcctcaaagaaacacttcctgac
atgaagatcaattgttcacattttacaactattgcaaggccaactgttggtgctaaaaag
aaccatgagatttggggcatcaaatgcagattgacaatgagaacccatagtggcttatga
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