Cygnus atratus (black swan): 118256673
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Entry
118256673 CDS
T09349
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118256673 (ZFR)
Spliceosome [BR:
cata03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118256673 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
118256673
NCBI-ProteinID:
XP_035419724
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All DBs
Position
Z:complement(11238071..11285380)
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AA seq
1071 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTG
TTFTKKTPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKAS
QNTNNSSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEP
NVVTQATSSTSTSASKPAASASNIATSSSTVNSSVASSAVKILTPTTNTPLNTASNNKTS
STAANIAVKKISTPKINFVGKYRSGNKLQTTGSKLEEMKSAESVKTAPVATVQTQEVKPD
TATEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKG
RRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYE
EDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSD
DRYVMTKHAAIYPTEDELQAVQKIVSITERALKLVSDNMTDHEKNKSKEGDDKKDSSKDR
ALKGVLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIK
CAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDAL
AALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQS
PGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAF
RQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttcgttcacctatgtgcccagccggctgggagaagat
gccaaaatggccaccggcaactactttggattcacccatagcggggctgctgctcagtac
agccagcagcctgcttcgggtgtagcctattcccatccaactacagttgctagctacact
gtccaccaggccccagtcgctgcacacacggttactgcagcctatgccccagcagcagct
acggttgcagtagccaggcctgctccagtagctgtcgcagctgctgcaacagctgctgca
tatggaggctacccgacggcacacacagctacagattatggttacacacagaggcaacaa
gaagctccaccaccaccacctcctgtcactacacagaattaccaggattcctactcatat
gttcgatctactgccccagctgtagcttatgacagcaaacaatactatcaacagccaaca
gcaactgctgcagctgtggctgctgctgcccagcctcaaccttcagtagctgaatcatac
taccagacagctccaaaagcaggatatagccaaggggcaactcaatatactcaagctcaa
caaacgcgacaagtgacagctataaaacctgcaaccccaagtccagcaacaactacattt
tctatatatccggtatcctctactgtgcagccagtagcagctgcagctactgttgttcca
tcctatactcaaagtgcaacgtacagtacaacagcggttacttactctggtacctcttat
tctggctatgaagctgctgtgtattcagctgcatcgtcctattaccagcagcagcagcag
caacagaaacaggcagcagcagctgctgctgctgctgctgcaacagctgcttggacaggg
accacctttactaaaaagacaccattccaaaataagcaactgaaaccaaaacaacctccc
aaaccaccccagatccactactgtgatgtttgtaagatcagctgtgctggaccacagact
tacaaagaacacttagaaggccagaaacacaaaaagaaagaagcggcattaaaagcttcc
cagaacaccaataacagcagcacttctgctcgtggaactcagaatcagttgcgctgtgag
ctttgcgatgtgtcttgtacaggagcagatgcgtacgctgcccacatccgtggagccaaa
caccagaaagtagtaaaattgcacacaaaacttggcaaacccattccttcaactgaacca
aatgtggttacccaggcaacttcctcaacatccacatctgcttccaaaccagctgcgtct
gcttcaaatatagcaactagcagcagtactgtgaactcctctgttgcatcctctgcagtg
aaaattcttactcccacgacaaatacaccacttaacacggcgtccaacaacaaaacatct
tcaactgctgctaatatagctgtaaagaaaatatctacaccgaaaataaactttgttggc
aagtacagaagtggtaataagcttcagacaacaggaagtaaactggaagaaatgaaatca
gcagaaagtgttaaaacagctcctgttgccacggtacaaacacaggaagtaaaaccagac
acagcaactgaaccagtgactcctacaactcttgctgccttgcaaagtgacgtccagcca
gtgggccatgactatgtggaggaggtaagaaatgatgaaggaaaggtgatccgctttcac
tgtaaactttgtgaatgcagttttaatgaccctaatgccaaggagatgcacttaaaaggg
aggcggcacagacttcagtataagaaaaaagtaaatccagatttacaagtagaagtaaaa
cccagtattcgagcaagaaaaattcaagaagaaaagatgaggaaacagatgcagaaagaa
gaatactggagaaggcgagaagaggaagaacgctggaggatggaaatgaggcgatatgaa
gaggacatgtactggaggagaatggaggaagagcagcatcactgggatgaccgtcgcaga
ataccagatggaggatatcctcatggtcctccaggacctctaggcctgctgggagttagg
ccaggaatgcctcctcagccccaaggaccagctcctctacgccgccctgactcctctgat
gaccgctatgtgatgaccaaacatgcggcaatatatccaacagaggatgaacttcaggca
gtccaaaaaattgtttctattactgagcgtgctttgaaacttgtttctgacaatatgact
gaccatgaaaaaaacaagagcaaagagggagatgataaaaaagacagcagtaaagacaga
gctctgaaaggagttttacgggtaggcgttttggctaaaggtttgctgctccgtggagac
agaaatgtcaatcttgttttgttatgtgctgagaagccttcaaagacgttactcagtcgt
attgctgaaagtcttcccaaacaacttgcagtaataagtcctgagaaatatgatatcaag
tgtgcagtcccagaagcagcaataattttaaattcatgtgtggaacccaaaatgcaagtt
actatcacgctgacatctccagtcattcgggaggagaacatgagggatggagatgtaacc
tcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctg
gctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtg
attatcatacgtattcttcgtgacctctgtcagcgtgttccaacttggtctgattttcca
agctgggctatggagttgcttgtagaaaaagcaatcagcagtgctactggaccacagagt
cctggggatgcacttagaagagtttttgagtgtatatcttcaggaatcatccttaaaggt
ggtcctggccttctggacccttgtgaaaaagacccttttgatacacttgctgtaatgaca
gatcagcaacgagaagatattacttcaagtgcacagtttgcattgagactccttgcattc
cgtcagatacacaaagttttaggaatggatccattaccacagatgaatcaacgcttcaac
atccataacaatcgtaaaaggagaagggacagtgatggggttgatggatttgaagcagag
ggaaaaaaagacaaaaaagattatgataacttttaa
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integrated database retrieval system
