Cygnus atratus (black swan): 118256760
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Entry
118256760 CDS
T09349
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118256760 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118256760 (SS18)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118256760 (SS18)
GBAF(ncBAF) complex
118256760 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
118256760
NCBI-ProteinID:
XP_035419883
LinkDB
All DBs
Position
2:complement(112384377..112422996)
Genome browser
AA seq
461 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMSSDGLVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSVPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQAGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPQQQGYPPQQQQYPGQQGYPG
QQQGYGPSQSGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQTLNLVVKDHD
KLVALMLSPLLSSAVCDVINDGSVRKLPTVKSIHIPVGNIY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggccttcgcggccccccggcagcggggcaagggcgagatcacgccggcggcc
atccagaagatgttggatgaaaataaccaccttattcagtgcataatggactatcagaac
aaaggaaagacatctgaatgctctcagtaccagcagatgctgcatacgaacttggtttac
ctagccactatagctgactccaaccagaacatgcagtctctactaccagcaccacccaca
cagaatatgcctatgggtccaggagggatgagtcagagcggccctcccccgccgccgcgc
tctcacaacatgtcttcagacgggctggtaggtgggggccctcctgcaccacacatgcag
aaccagatgaacggccagatgcctggacctaaccacatgcctatgcaaggacctggacct
aaccaactcaatatgacgaacagttccatgaacatgccttcgagtagccatgggtcgatg
ggcggctataatcactcggtgccatcctcgcagagtgtgcccgtgcagaatcagatgact
atgagccaggggcagccgatgggcaactacggtcccagaccaaacatgaacatgcaacca
aaccaaggtccaatgatgcaccagcagcctccttcccagcaatacaacatgccacaagca
ggtggccagcattaccagggacagcagccacctatgggaatgatgggccaagttaaccaa
ggaaatcacatgatgggtcagagacagattcctccatacagaccaccacagcaaggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcacaatatggtcagcagcaagatgcatatcaaggaccaccc
caacagcagggttatccaccacaacagcagcaatatccaggccagcaaggctatcctgga
caacagcagggttatggtccttcccagagtggtcccggacctcagtatcccaattaccca
caaggacaaggccagcagtatgggggatacagacccacgcagcctgggccaccacagcca
ccacagcagaggccttatggatatgaccagaccttgaaccttgtggtgaaggatcatgat
aaacttgtagcactgatgctttcacctctgctctcctctgcagtatgtgatgttatcaat
gatgggtcagtacggaaattaccaacagtgaaaagtattcacattccggtaggcaatatc
tattag
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