Cygnus atratus (black swan): 118256769
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Entry
118256769 CDS
T09349
Symbol
TAF4B
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118256769 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118256769 (TAF4B)
03036 Chromosome and associated proteins [BR:
cata03036
]
118256769 (TAF4B)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118256769 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
118256769 (TAF4B)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118256769 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
118256769
NCBI-ProteinID:
XP_035419901
LinkDB
All DBs
Position
2:112448954..112519494
Genome browser
AA seq
832 aa
AA seq
DB search
MSAPAAAPVGLVPAGHPEQAASAAAGSPAPSRGSAAAASSKAPGGPAPSAPPPAGPPVLR
VAAGGAPRPAVAPKGPPAATIQLPANLQLPPGTVLIRSSNGQLMLVSQQAIARAQTQPQN
NTSVRPSVPTSTPAVRICAVQNSGTQLLKKAVATPVKTLSQTTNAVASTVQPPAVIQPAA
ATASVTTVTAVKPSSTGTPVKLPVTGPPAQSISQKAVSVKAEGTTVAQTSASTEMLENVK
KCKNFLATLIKLASSGPQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLYIELKSSPQPYLV
PFLKKSMLALRQLMPNAQSFIQQCMQQPAPTQEAVSTCTSAPTPVAVATSAVATNSLPVI
KPVSASATVAASPVIKPVLSSAPVTASLQTVKPVPASAVVAASLRPAASVLTTTIATSGL
TAIQTVKPVFTSAVATSSLQPVKPVLVSAVASSATTPLQPLKPVIGTPISIKISQPNSIV
AQSVGAQQVVKVKQLVVQQPSGAIVKQVSTLPQPSTLTLQTSAEKRMPLNTLVQTNQFPA
GSILKQVTLPGNKILSLQASPVQKTKXKENGTTSFRDEDDINDVTSMAGVNLSEESACIL
ATNSELIGTVIRSCADEPFLSSEALQKKILNIGKRHDIMELNSDVVNLISHATQERLRGL
LEKLTVIAQHRVSTHKGSDKYIVSSDTRAQLRFLEKLDHLEKQRKDEEEREMLLRAAKSR
SNKEDPEHLRLKQKAKEMQQLELAQMQQREANLTALAAIGPRKKRPLDSSNAGSGLEGLN
GNGIAPGSSNFSLTKQLLRPRITRVCLRDLIFCMEQEREMKHSLTLYRALLK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccggcggccgcccccgtagggctcgtgcccgccgggcacccggagcaggcg
gcgagcgccgcggccggctccccggctccctcccggggcagcgccgccgctgcctcctcc
aaggcgcccggcggcccggcgccctccgccccgccgcccgcggggcccccggtgctgcgg
gtggccgccgggggggctccgcggccggcggtggctcccaaggggccgcccgccgccacc
atccagctgccggccaacctgcagctgcccccaggaactgttcttatcagaagcagtaat
ggccaactaatgctggtatctcaacaagcaatagcacgagcacagactcagccacaaaat
aacacaagtgtacgaccgtctgtacctaccagcacacctgcagtcagaatatgtgctgta
cagaactctggcacccagttactaaagaaagcagtagctactcctgtgaaaacattatct
caaacaacaaatgctgtggcttctactgttcagccacctgctgtaatacagccagcagct
gcaacagctagtgttactacagttactgctgtaaagccttcgagtactggaacacctgta
aaacttccagttacaggaccacctgcacaatccatctcccagaaggcagtctctgtgaaa
gcagagggcacaacagtagcacagaccagcgcttctacagagatgttagagaatgtgaag
aaatgcaagaatttccttgctacgctaataaaattggcatctagtggacctcaagccccc
gagatggggcagaatgtgaagaatctggtgcaaaatctcttggaagcaaaaattgaacca
gaagaatttacaaagaagctgtacatagagctcaagtcttctccacagccgtatttagtt
ccttttcttaagaaaagcatgcttgccttacggcaactaatgccaaatgctcaaagcttt
atccagcagtgtatgcagcagccagctccaacccaagaagctgtttcaacttgtacctct
gcaccaactcctgtagcggtggcgacctcagctgtagcaacaaattctcttcccgttata
aaaccagtgtctgcctctgcgacagtcgcagcctctccagttataaaaccagtcctttcc
agtgcaccggtgacagcctctctgcagaccgtgaagcctgttcctgcctctgcagtggtg
gcagcctctcttcgtcccgcagcgtcagtcctcaccaccacaatagcgacatcagggctg
actgctatccaaactgtgaagccggtcttcacctctgcggtagcaacgtcctctctccaa
cctgtaaagccagtgctcgtctctgcagtggcatcctcagcaacaacccctctccagcct
ttgaaaccagtcatcggcacccccatcagtattaaaatctcccagccaaactccatcgtt
gcgcagtcggtgggcgcgcagcaggtggtaaaagtgaaacagttggtagtccaacaaccg
tcaggagccattgtaaagcaagtatccacactcccacagccctcaacgctgactctccag
acatctgcagagaagaggatgccgctgaatacgcttgttcaaaccaaccagtttcctgca
ggttccattctgaaacaagttaccctgccaggaaataaaattctgtcgcttcaagcatct
cctgttcagaaaactaaanataaagagaatggaacaacatccttcagagatgaagatgac
ataaatgatgtgacttctatggctggggtcaacctgagtgaggagagcgcgtgcattctg
gcaacaaattctgaactcattggtacagtgatccgctcttgtgcagatgaaccttttctc
tcttcagaagcacttcaaaagaagatcttgaacatcggtaaaaggcatgacattatggaa
cttaactctgatgttgtgaacttgatctcccatgctacacaggagagattacgagggctc
ctagaaaaactaactgtaattgctcagcacagagtatcaacccacaaggggagcgataag
tacatcgtatctagtgataccagagcacagctgagatttctcgaaaagcttgatcacctg
gaaaagcagagaaaggacgaagaagaacgtgaaatgttactacgagcagccaagagccgt
tccaataaagaagatcccgagcatctgcgtttgaagcagaaagcaaaagagatgcaacag
ttggagttagcacaaatgcaacaaagagaagccaacctcacggctttggcagccattgga
ccgagaaagaaaaggccgttggattcatcaaacgctggatctgggctggagggtttgaat
ggcaatggaattgctcctggatcgtcaaattttagccttacaaaacagctgcttcgtcca
agaataacccgtgtctgtctcagggacttgatattctgcatggaacaagagagggagatg
aagcattctctaaccttgtaccgtgctcttctgaagtga
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