Cygnus atratus (black swan): 118256837
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Entry
118256837 CDS
T09349
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118256837 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118256837 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118256837 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF883
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
118256837
NCBI-ProteinID:
XP_050564731
EnsemblRapid:
ENSACYG00000013004
LinkDB
All DBs
Position
2:107564159..107662356
Genome browser
AA seq
3140 aa
AA seq
DB search
MRGLGAGIKAAIVLGWILKRPEGLQLSSQRNQEAQCYWGDHLGVDQETHLHERASAHESN
RDEKSQGQLLGLFPAILNLASNAHISTNATCGEKGPEMFCKLVEHVPGRPLRNAQCRVCD
RHSVNPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWVTITLDLRQVFQVAYVIIKSANAP
RPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITPRIGPPTYKRDDEVICTSYYSRLV
PLEHGEIHTSLINGRPSADDPSEKLLEFTSARYIRLRLQRIRTLNADLMTLSHHDPKELD
PIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKKLQCRCEHNTCGESCNKCCPGYHQ
KPWRPGTISAGNKCEKCNCHNKAEDCYYNQSIADQKRSMDIHGQYIGGGVCLNCTQHTTG
INCEMCADGYFRPHKVSPYDDHPCYPCGCDPFGSLSSDCVKDEHHSDSQRGMWPGQCQCR
EGYTGEKCDRCAFGYRGYPNCLRCNCSLIGSINEDPCTEPCLCKENVEGENCDLCKPGFY
NLQERNPQGCTECFCFGVSDVCDSLTWPISQISHMTGWLVTDLYNAKGVQPQQSQLDGPH
QISINNTEAVKVLKHTYYWSAPEPYLGNKLTAFGGDLKYTVSYDIPVESVDSDIVSSMDV
IIQGNGQILSTRAAGLSLQPYEEYSNSVRFVSENFVDFNTKKAIDRERLMSVLVNVTHLL
IRANYNIAKKAVYRLDSVTLDTASANVIDLSSAPDVEFCECPQGYTGISCESCLPGYYRV
DGILFGGICQPCKCNGHATECDIQGVCFACQHNTTGPFCEQCLPGFYGNPSRGTPEDCQP
CACPLSSAANNFSPTCQLREGGGIVCDKCLPGYTGFQCERCANGYYGNPLMPGQSCAPCE
CNGNVDPQEDGHCDTVTGQCLKCVGNTAGHHCEKCADGYYGDAVVEKSCRVCECHVNGSL
SSSCHHETGFCHCKSNVIGQRCDKCLNGYYGLLTGLGCIPCNCSQFGSVSEVCSHQGQCH
CLPGVAGEKCDRCAHGFYSFQNGGCTPCDCAHTQNNCNADSGQCICPPHTRGPKCEFCEE
NHWGLSPKLGCKACNCSDTGSINLQCDVLTGQCQCKAEFGGQDCSRCALGYRDYPDCVAC
DCDLSGTKAEMCDDIEGLCGCEEETGICICKENVFGLQCSECKPGTFALSANNSLGCTPC
FCFGLSLFCWEVEDHVRIPITLTPDQSILHVVAPSNLTGTAEGVFSQFSDILLDATIVRK
YLNTETFYWRLPEQFQGDQLMAYGGKLRYTVAFYALDGFGTSNFEPQILMKGGRTSKLVI
YVDIPSPENGIRSDKEVEMKEDSWKYFNSVSEKPVSRSDFMSVLSNIEYILIKAAYGQGL
QQSRIANISMEIAVKFEEMHRGRSRAHLIEQCRCPAGYTGFSCQSCAPGYYREKPTELGV
RESHTMIAPCLPCQCNNHSETCDPETGKCLDCRDNTVGDYCSACAPGYYGKVIGSVNDCS
LCACPRANPVSFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHPCR
CNPSGSVHVNCDRATGKCLCKQGVTGQLCEECEARHLLVEEECVSCDDNCTGVLLSNLDN
LNKAILSVNLTGIARVPYGILAELENATKHLKGSVVSREDPTYSLATAKENLLSLSGGFA
QLPEESSRILKKAWQLNTMTQETRNKSKELIGFIDAVHTAIKVLAEVAVSLNETLGLDLP
LPNATSQSLQDDISAQLDALRKKDFGQQHYNATSLLKAAENLLLRVQKEYLRPQQELAEL
KKNASQLLSKHNSRLQDAQDMVNEALANINETNRLFPLISSNLGELNEKKLNIKEGKEVS
TMLIKEGRILVNVAAALVQDVKNSTSNLEVHQDGLVLWSTNLRHHVDELVMQMSVRGVLD
LVYRAEDHAAQFQRLADALESGLSKIRNVTLNATAAVYTHSNVKSVIERTESLADDASRV
VNGPLDLPEESLSLPGKQALLLSSKFQNEAKNLKKKSNGLVFELNGLNKKVEKIQESAIK
IVNQLNDSLLTLKALPNDTRKYVLEVKELVVSANTSTMVGLSHFGDFNQKLLNTSSTLSR
VNDTLRKTSELITDSSKAAITAEKQVKEVKAQASLLLNKLKPLKMLEENLSRNLSEIKEL
ISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLTLNVKTTEPDNLLFYLGSNGKTD
FLAVEMRRGKVALLWDLGSGSTRVEYPDLQIDNNKWHRIHATRFGKTGALSIEEVNSNQK
SSSKSATSPGTASILDVNKSTLMFIGGLGGQIKKSPAVKVTHFKGCMGEASLNGKSIGLW
NYMEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALRSTVTQIIIFFSTFSPNGLLLYL
TSNGTRDFLSLELVDGKVRLTVDLGSGPLALTTENRYNNGTWYKISFSRNKKQGMLAVMD
AYNLNYKETKQGESPGVASDLNRSDKDPIFIGGLPRSRAVRKGLNSRTYVGCIKNLEISR
STFDLLRNSYGVRKGCVLEPIRTVNILNNGYIELEPKSLSPESELMTTFATKNSNGIILA
GLSRRTEKRQRRQAHLPFFSIMLVDGHLAVHINAGDRASTKKVILQSANGTYSDGQEHSL
ILIRNKRIITVQVDESTPSELRLGSSAEMSPMNISNFYAGGIPPGEGFLGLKMTGSFRGC
ISNLIFNKELLDFTTSMKYEYVDMDSCFLSEKPKPAIKLEDVDIQPEVQALPVPLRPLTD
SKKLVCAKDELPDHVQGARQFGLAKGSHLTLLFNQSTVRKKLSVQLNLRTFASSGLIYYM
AHQNQVDYAALQLHGGQLYFSFDLGRGKAVAFHPAVVNDGKWHTIKTEYAKRKGIIIVDG
HELVAVSALGDGSTLDVEGKLYVGGLPLDYVAKNLGNVTHSIPACIGSMTINSKQLDKES
PVSIFAVNKCYVTVQEGTFFDGSGFAALYREGYKVRSDVNITLEFRTTAMNGVLLGVSSA
KVDAIGLEIVNGKVLFHVNNGAGRITATYEPGVTNGLCDGKWHRLQANKSKHRISLIIDG
NLVQTDNPYVQSTSADTNNPVYVGGYPGDVKQNCLTSKSSFHGCLRNLVMNKGQQTELFD
FSKAFDLRGVFPHSCPGAEH
NT seq
9423 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttgggagcaggtatcaaagcagccatagttctaggatggatactgaagaga
ccagagggtctgcaattgagcagccagaggaaccaggaggcccagtgctactggggagac
catctaggcgttgaccaggagacccatcttcatgaacgtgcatctgcgcatgagtcaaat
agagatgagaagagccagggccagcttctaggcctgttccctgccattttgaacctggcc
agcaatgctcacatctccaccaacgccacctgtggggaaaaaggaccagagatgttctgc
aaacttgttgagcatgtcccaggccgacccctgcgcaacgcccagtgccgggtctgtgac
cgtcacagtgtcaatcccaaagagcagcacccaatttctagtgcaattgatggtaccaat
aattggtggcaaagtcccagcattcagaatgggaggcagtaccactgggtcaccatcacc
ttggatctaaggcaggtctttcaagttgcatatgtcatcatcaaatctgctaatgctcca
cgacctggaaactggattttggaacgctccatagatggcacagagttcagaccatggcag
tactatgcaattagtgacacagaatgtttaacccgttataatatcacaccaagaattggg
ccaccaacgtacaagagagatgatgaagtgatctgcacctcctattattccagactagtt
cccctggaacatggagagattcacacgtcactgatcaatggcaggcctagtgctgatgat
ccttcagaaaagcttttggagtttacctctgcacgatacattcgcctacgactgcagcgt
attagaactcttaatgctgacctcatgactctcagccatcatgatcctaaagaactagat
cccattgttaccagaaggtactactactcaataaaggacatctctgttggtggcatgtgt
atttgttatggccatgctcgaagctgccccttggatgaaatcacaaagaaattgcagtgc
cggtgtgagcacaacacatgtggagagagctgtaacaagtgctgtcctgggtaccatcag
aaaccatggagaccaggaaccatttctgctgggaacaaatgtgagaagtgcaactgtcat
aacaaagcagaagattgttattacaaccagagtattgcagatcagaaaaggagcatggat
attcatggccagtatataggaggtggtgtctgtttaaactgtactcaacatactactggg
atcaactgtgaaatgtgtgctgatggatattttagaccacacaaagtttctccctatgat
gatcacccctgctatccctgtggctgtgacccatttggatctttgagttctgactgtgtt
aaagacgagcaccattctgactcacagcgtgggatgtggccaggtcaatgtcaatgcaga
gaaggttacacaggagaaaaatgtgaccgttgtgcatttgggtatcgaggctatccaaac
tgcctgcgttgtaactgcagcctaattggcagcattaatgaagatccatgcacagaacct
tgtctttgcaaagaaaatgtagaaggtgaaaactgtgacctctgtaaacctggattctac
aacctgcaagaaagaaatcctcagggctgcacagagtgtttctgctttggagtttctgat
gtctgtgacagcctaacatggcccatcagtcagatatcacacatgactggatggcttgtt
actgatctatataacgcaaagggtgtgcaacctcagcaaagtcaattggatggcccccat
caaataagcatcaacaacactgaggctgtgaaagtgctgaaacatacttactactggtca
gcacctgagccatatttaggaaataaactcacagcttttggtggagacttgaagtatacg
gtgtcttacgacattccagtggagagtgtggacagtgatatagtatctagcatggatgtc
atcattcagggcaatgggcagattttgagcacaagagcagcaggcttgtcattacagcca
tatgaggagtactctaattcagtgagattcgtgtcggagaattttgtagacttcaataca
aaaaaagctatagaccgggaaagactgatgagtgttctagtaaatgtgactcatcttctg
attagggccaactacaacattgccaaaaaagctgtgtacaggctggactctgtaaccctg
gatactgcaagcgcaaatgttatagatctttcttcagcaccagatgtggaattctgtgaa
tgtcctcaaggttacacaggaatatcctgtgagtcctgtctccctgggtattaccgtgtg
gatggaatactatttgggggtatctgtcaaccatgcaaatgcaatgggcatgcaactgaa
tgtgatattcaaggtgtttgctttgcttgtcaacataacacgacaggacctttttgtgaa
cagtgcttgcctggcttctatggaaatccatcccgaggaactcctgaggactgccagccc
tgtgcctgtcctctgagctctgctgcaaacaatttcagtcccacttgccagctgagggaa
ggaggtggaattgtctgtgacaaatgtcttccaggctatactggtttccagtgtgaaagg
tgtgctaatgggtactatggaaatccactcatgcctggacagtcgtgtgctccttgtgaa
tgcaatggcaatgtagaccctcaggaagatggtcactgtgatactgtcacaggacagtgc
ctgaaatgtgtggggaacacagcaggtcaccactgtgaaaagtgtgctgatgggtattat
ggggatgcagtggttgagaaaagttgtcgtgtctgtgagtgccacgtgaatggttccctt
tccagtagttgtcatcacgagacaggcttctgtcactgcaagtcaaatgtgattggacaa
agatgtgataagtgcttgaatggctattatggcttgcttactggacttggctgtattccc
tgcaactgcagtcaatttggctcagtctccgaggtctgcagtcatcaggggcagtgtcac
tgtttaccaggcgtggctggagaaaagtgtgatcgctgtgctcatggcttttattcattc
cagaatggtggctgtacaccctgtgactgtgctcatactcagaacaactgtaacgcagat
tctggtcagtgcatttgtccccctcacactcggggaccaaaatgtgaattctgtgaagaa
aatcactggggactctctcctaaacttggctgcaaggcttgcaactgtagcgacactggt
tcaatcaatctccagtgtgatgtattgactggtcaatgccagtgcaaagctgaatttgga
ggacaagactgttccagatgtgcattaggctacagggactatccagactgtgttgcctgt
gactgtgacttaagtggaaccaaagcagaaatgtgtgatgatattgaaggactttgtggg
tgtgaagaagaaactggcatctgtatctgcaaggaaaatgtatttgggctgcagtgcagt
gagtgtaaacctggaacttttgctctgtctgctaacaattcactgggttgtactccatgt
ttctgctttggcctgtccttgttttgttgggaagtagaagatcatgtgagaattcccata
accctaactcctgaccagtccattctgcatgtagtagctccaagtaacctgactggaaca
gcggaaggagtattttcacaattttctgacattttactggatgctaccattgtcagaaaa
tacttaaatacagaaacattttactggaggttaccagagcagtttcagggagaccagctc
atggcatatggaggcaagctgagatatactgttgctttttatgctttggatggctttgga
acctcaaattttgagccccaaattctaatgaaagggggtcgtaccagcaaattggtcatc
tacgtagacatcccttccccagaaaatggaataagaagtgacaaggaggtggaaatgaag
gaggattcttggaagtattttaattctgtgtctgaaaagcctgtctcacgttctgacttc
atgtctgtgctaagcaatattgaatacatccttatcaaggcagcctatggccaaggatta
cagcaaagcagaattgcaaatatctcaatggaaattgcagtgaagtttgaagagatgcat
agaggcagatctagagctcaccttatagagcaatgtagatgtcctgctggttatactgga
ttctcctgtcagagctgtgctccaggatactacagggagaagcctacagaacttggtgta
agagagtctcatactatgatagcaccttgtttgccgtgtcagtgcaacaatcacagtgaa
acctgtgatcctgaaactggaaagtgcttggactgcagagataatacagttggtgattac
tgcagtgcttgtgccccaggatactatggtaaagtaattggatctgtcaacgactgctct
ctttgtgcctgtcccagagccaaccctgttagttttagtccaacttgtgttctaaaaggt
gtccaagattaccactgtgatgcttgtctcccaggatatgaaggacaatattgtgaaaag
tgttccctcggctattacggtgatcctcagctgcctggaggcagctgccatccatgtcga
tgcaatccaagtggctctgttcacgttaattgtgatcgtgctactggcaagtgcctctgt
aagcagggagtcacaggacagctctgtgaggagtgtgaagcgaggcatcttcttgtggaa
gaagaatgtgtttcttgtgatgacaactgcacaggagttttgctaagtaatttggataat
ctcaacaaagccatactttcagtgaacctcactggtattgcccgtgtgccctatgggata
ttggcagagctggagaatgcaacaaaacatctgaaggggtctgttgtttctagagaagat
ccaacttactcattagctacagcaaaagaaaatcttctgagtttatcgggaggttttgct
cagttgcctgaagagtcatctagaattttgaaaaaagcttggcagcttaacacaatgact
caggaaaccaggaataaaagtaaagaactgattgggtttattgacgcggtacatacagcc
atcaaagtacttgctgaagttgcagtgtcgctaaatgaaacactgggcttggatctccca
ctgccaaatgctacatctcagagccttcaggatgatatttctgcccagctggatgcgttg
cgcaagaaagattttggtcaacagcactacaatgctacaagtctcctgaaagctgcagaa
aacttgttgctccgggttcaaaaagagtatcttagaccccagcaagagcttgctgagctg
aaaaagaatgcaagccagctcttatcaaagcacaacagcagactgcaagatgcccaggat
atggtgaatgaggcactggctaacatcaatgagaccaatcgcttgtttcctcttatctcc
agcaacctgggagaattaaatgaaaaaaagctgaatataaaggaaggtaaagaagtctca
accatgcttattaaagaaggaaggatcctagtgaatgttgctgctgctcttgtccaagat
gtaaagaactctacctctaacctggaggtccaccaggatgggctagttctatggagtacc
aacttgcgacaccatgtggatgagctggtgatgcagatgtccgtgagaggagtgcttgac
ctggtatacagagctgaggatcatgctgcccagttccaaagacttgcagatgcactagaa
agtggcctctctaaaataaggaatgtgactctgaatgcaactgctgctgtctacacccac
tccaatgttaaaagtgtgattgaaagaacagagagtctggcagatgatgcctctagagtt
gtgaatggccccttggatttgccagaggagtctctcagtcttcctggaaaacaagctcta
ctgcttagctccaaatttcaaaatgaagcaaaaaatctgaagaaaaaaagtaatggcctt
gtatttgaattgaatgggttgaacaaaaaggtagaaaagattcaggaaagtgctattaaa
attgtcaaccagcttaatgattccctgttgacactaaaagcattgcctaatgatacaagg
aaatacgtgcttgaggtgaaagagctagttgtgtctgcaaacaccagcaccatggtgggt
ttaagccactttggggatttcaatcaaaagctcctgaatacttcgtctacattgtcccga
gttaatgacacgttgaggaaaactagtgaacttataactgattcatcaaaagctgcaatc
acagctgaaaaacaagttaaagaggtcaaagcacaagcaagtcttttacttaataagctg
aaacctctgaaaatgctagaagagaacctcagcagaaatttgtctgaaattaaagagctc
atcagccaagcccgcaagcaggcagcatctattaaagttgcagtatcagcagacagagat
tgtattcgtgcctaccaaccccagatttcatctacaaattacaacaccctaacccttaat
gtgaaaactactgaaccagataacctccttttctacctgggtagtaatggaaagacagac
ttccttgcagtggagatgcgacgtggtaaggtagctcttctttgggatttgggctctgga
tcaacaagagtggaataccctgatcttcaaattgacaacaacaaatggcacagaatacat
gcaaccaggtttggaaaaacaggtgcactcagcatagaggaagtgaactccaatcagaag
tcttcgtctaaatctgcaacctctcctgggacagccagcatactagatgttaacaaatca
acactgatgtttattggaggacttggggggcaaatcaagaaatcacctgctgttaaggtg
acacattttaaagggtgcatgggagaagcatccctgaatggcaaatctatcggtctttgg
aactacatggaaagagagggcaagtgcaatgggtgttttggaagcccacaggatgaagac
acttcattccattttgatggcagtggatactcagttgtggagaaggctcttcgctcaaca
gtgactcagataataatatttttcagcaccttttcacctaatgggcttcttctgtatctt
acttcaaatggcactagagatttcttgtcccttgagcttgttgatggcaaagtgagactg
actgttgatctaggttcaggacctcttgctcttacaacagaaaatcgttacaataatgga
acatggtataaaatttcgttcagtcggaacaagaaacaaggaatgctggcagttatggat
gcatataaccttaattataaagaaaccaagcaaggagaatctcctggagttgcctcagac
ctgaaccgctctgataaggacccaattttcattggtgggctgccaagatcaagggctgtg
aggaaaggtctgaatagtagaacatatgtgggatgcatcaagaatctggaaatatcccgt
tcaacctttgacttgcttagaaattcatatggagtaagaaaaggctgtgtattggagcct
attcgtactgtgaacatcttgaacaatggatatattgagttggaacctaagtctttaagt
ccagaatcagaactgatgacaacttttgctacaaagaacagcaatggcatcatccttgct
ggactcagcaggagaacggagaagcgacaacgcagacaagcgcatttgcccttcttttcc
atcatgctggttgatggtcatcttgcagtgcatattaatgctggagatagagcaagtact
aaaaaagtaattcttcagtctgctaatggaacgtacagtgatggacaagaacactctctc
atcctaattcggaataagaggatcataactgtacaagtggacgaaagtaccccttcagaa
ctgaggcttggttcgtcagcagaaatgagtcccatgaatatttccaacttctacgctggt
ggcattccaccaggcgagggcttcttagggctaaaaatgactggctcctttcgtggctgt
atcagcaatcttatttttaacaaggaacttttggatttcaccacttccatgaagtatgaa
tatgtggatatggacagctgctttttgtcagagaagcctaaaccagccataaagctagaa
gacgttgatattcaacctgaagttcaggctttaccagttcccctgaggcctcttacagat
tcaaaaaaactagtatgtgcaaaagatgagctgcctgatcatgttcaaggtgcccgtcag
tttggacttgccaaaggcagccacttgacactgctcttcaatcagtctactgtcaggaag
aaactttctgtccagctgaatctcagaacctttgcctccagtggcctgatttactacatg
gctcaccagaaccaggttgattatgcagccctacagcttcatgggggacagctctatttc
tcatttgatctaggcagaggaaaagcagtagcatttcaccctgctgttgtcaatgatgga
aaatggcatacgataaagacagaatacgctaaaagaaaaggtatcatcattgtggatgga
catgaattggtagcagtcagtgccctgggagatggcagcactttggatgtggagggaaag
ctctacgtgggaggactccccttagactatgtggcgaagaatcttgggaatgtgactcac
agtattcctgcctgcattggcagtatgaccatcaacagtaagcaattggacaaggagagc
cctgtctctatctttgctgtgaataaatgctacgtcacagtgcaggaagggactttcttt
gatggaagtggttttgctgctctttatagagaaggttacaaagtccggtctgatgtgaac
atcacacttgagtttcgtacaacagccatgaatggtgttctccttggggtcagcagtgct
aaggttgatgccattggactggagattgtaaatggcaaggttttattccatgtcaacaat
ggagctggcagaataacagctacgtatgaaccaggagtcacaaatggtttatgtgatgga
aaatggcacaggcttcaagcaaacaaaagcaaacatcgtatttcactgataattgatggg
aatttggttcaaactgataatccctacgttcagtcaacatctgcagacacaaacaatccc
gtttatgttggaggttatcctggtgatgtgaagcaaaactgtctcacgagcaagagctca
ttccatggctgtttgaggaacctcgtgatgaacaagggccaacagacagaattgtttgac
ttcagcaaagcttttgacctgcgtggagtctttcctcattcctgccctggggctgagcac
tga
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