Cygnus atratus (black swan): 118256933
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Entry
118256933 CDS
T09349
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118256933 (MSH4)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118256933 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
Aq_aa27
nSTAND3
ATPase_2
nSTAND_NTPase5
AAA_28
AAA_30
Motif
Other DBs
NCBI-GeneID:
118256933
NCBI-ProteinID:
XP_035420254
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All DBs
Position
8:32965011..33001734
Genome browser
AA seq
973 aa
AA seq
DB search
MRRWAAVDAIWGECGGRGLVFVTEPPPTVPDPGDAAMSKGGSETNTYGRPVVSAASGSYT
DRCSSTSGLGGRVEELPRYTLGLLQTPRGAADSTGDLSSGGARPGSSSGVGLAASSSRVK
LPVPGRGESYLGDKSSCAENGSMLNFTSSSVQGLNSTCIGKLPLSTSRSICRSHTPHMGY
SVTSSSAVSVHTAASVIVAVVEGRGLARGEVGMASIDLKNPEVILSQFADNTTYAKVITK
LKILTPLEIIMPNTACDAGNTKLFGLITEHFKNVTFTTVQRKYFNETKGLEYIEQLCASE
FSTIFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVRFQGSEKTAMIDSSSAQNLE
LVTNNRDSWNGHTLFGVLNYTKTPGGSRRLRSNILEPLVDAETINTRLDCVQELLQDEEL
FFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKTALRSC
NTPLLKAYYSSLEDRRFGIILEKITTVINDDTRYTKGCLSMRTQKCYAVKPNINEFLDIA
RRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSARGFFIQMNADCSTLPSGQLPSEFTKIT
KMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIYEHIHCLYKLSDTVSMLD
MLLSFAHVCTVSDYVRPEFTDTLAIKQGWHPILEKIAMEKPVSNNTYLTEGSNFLIITGP
NMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNASTFMKEMK
EITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATHFLELCHID
ALYPNVENYHFEVQHVGSSAIKKEKIAYTYTLSKGYTEEKNYGLKAAEVSSLPPSIILDA
KEITNHIAKQILHQQKSTPEMMKRRAVYHLAMRLVQTARNSRLDSDSLRIYLKGLKKKYK
ASFPASEQNDEQQ
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggtgggccgccgttgacgccatttggggagagtgtggtggccgcgggttggtc
tttgtcacggagcctccgcccacggtgcctgatccaggcgacgcggcgatgtcgaaagga
ggcagtgagacgaacacgtatgggcggcccgtcgtctcggccgcctcagggtcatatacg
gaccgctgctcttccacgtcagggttgggtggacgagtggaagagttgccccgctatacc
ctgggcctgctgcagacgccgcgcggtgcggcggacagcaccggcgacttgtccagcggc
ggggcgaggccgggtagctccagcggggtgggccttgctgccagtagtagcagggtgaag
ctgccggttcccgggagaggagaatcttatcttggtgacaaaagttcttgtgcagaaaat
ggtagcatgttgaatttcacaagttcttctgtgcaaggcctgaatagcacatgtatagga
aaattacccctttctactagtagatctatttgcagaagccatacccctcatatgggatat
tcagttacatcctcatctgcagtctctgttcataccgctgcatcagttattgtagctgtt
gtagaaggaagaggccttgccagaggtgaagtaggaatggccagtattgacttaaaaaat
cctgaggtgatattatcacaatttgcagacaatacaacttatgccaaggttattactaaa
ctcaaaattttaacaccactggaaataataatgccaaacactgcttgtgatgcagggaac
acaaaattgtttggtctgataacagaacatttcaagaatgtgactttcacaactgtccaa
agaaaatacttcaatgaaacaaagggattggaatatatagaacaattgtgtgcatctgaa
ttcagcaccattttcatggaggttcagtcaaagtactactgtcttgcagctgctgcagct
ttgctaaaatatgttgagtttattcaaaattctgtttatgctcctaaatcactcaaggtg
cgtttccaagggagtgagaaaacagctatgatagattcatcatcagctcaaaatcttgaa
ctagtaactaataacagagattcttggaacggtcacacactttttggtgtcctaaattat
actaaaactccaggaggaagtcgaagactcagatccaatatcctggagccactagttgat
gctgaaacaattaacacaagactggattgtgttcaggaattactccaggatgaggagctg
ttttttggtcttcaagcagttatctcaaaattcctggatacagaacaactgctttcagtt
ttggtacaaattccaaagcaggatacagttaaaactgctgaatcaaaaataactaactta
atttacctgaagcatactctagaacttgtggagcccctaaaaactgctttaagaagctgt
aacacaccactgctaaaggcctattacagttctcttgaagatagaaggtttggaattata
cttgagaagattacaactgtaattaatgatgatacaaggtacacaaaaggatgtctgagt
atgaggacacaaaaatgctatgctgttaagccaaacatcaatgaattccttgacatagct
cgtagaacatacacagaaattgttgatgacatagcaggtatgataacacaacttgcagaa
aagtacaacctaccaatgaaaacaagtttcagttctgctcgtggattttttatccagatg
aatgctgattgttcaacactgcccagtggccaacttccttcagaatttacaaagatcact
aaaatgaaaaacacgtatagcttcacttcagcagacttaataaaaatgaatgagagatgt
caggagtccctgagagaaatatatcacatgacatacttaatcgtgtgtaagctactgaac
gagatctatgaacatattcattgcctatacaagctgtctgatactgtgtcaatgctggac
atgctgctttcattcgcccatgtctgcactgtttccgactatgttcgtccagaatttaca
gatactttagcgatcaagcagggatggcatcccattcttgaaaagatagctatggagaaa
cctgtatctaacaacacatacctgacagagggtagcaactttctcattattacaggacca
aatatgagtggaaaatcaacatatctaaaacagattgcactctgtcaaattatggcccag
attggttcttacgtcccagcagagtattgttcttttcgaatcgcagagcaaatttttacc
agaataggtatggatgatgatatagaaacaaatgcctcaacattcatgaaggaaatgaaa
gagataacatacatcatacaaaacgctaatgacaaatcactcatcataattgatgaactt
ggcagaggtaccagtgctgaagaaggtattggcatttgttatgctgcctgtgaatacctg
ttgaatttgaaggcatttacattgtttgctacacatttcctggaactgtgtcatatagat
gctttatatcccaatgtggaaaattaccattttgaagtgcaacatgtgggaagcagtgct
ataaagaaggaaaaaatcgcgtacacttacacgctctctaaaggatatacagaggaaaag
aactatggattaaaagctgcagaagtttcctctctaccaccatccataattttggatgca
aaggaaatcacaaatcatattgcaaaacaaattttgcaccagcagaaaagcactcctgag
atgatgaaacgcagagctgtatatcatttagcaatgagattggttcagactgccagaaat
tcacgattagattcagacagtttgcgaatatatttgaaaggtttgaagaaaaagtataaa
gccagttttcctgcatctgaacaaaacgatgaacaacagtaa
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