Cygnus atratus (black swan): 118257001
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Entry
118257001 CDS
T09349
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X2
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118257001 (RNF20)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118257001 (RNF20)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
118257001 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
BRE1
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
118257001
NCBI-ProteinID:
XP_035420408
LinkDB
All DBs
Position
Z:75041461..75064299
Genome browser
AA seq
984 aa
AA seq
DB search
MSGIGNKRAAGDPGPSAPPEKKAGVEDSGTTVETIKLGGVSSTEEMDIRTLQTKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIINRYWNQFDENIRIILKRFDLDQGLGDL
LSERKALVVPEPEPDSDSNQERKDERERGEGLEPAFSFLATLASSTSEEIESQLQERVES
SRRAVAQIVTMYDKLQEKVDVLSHKLNSGDITLMEEAVLELNSYLSHENGRLQELADLLQ
EKHRIMSQEFSKLQERVETAESRVSVLETMIDDLQWNIDKIRKREQRLNRHLADVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAGNRLNELEELRQDLAEVTTQN
EKLKVELRRAVEEAVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRTTHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLSKIRSRSGSTILQSQSSTEDTKEEPPEIKQEP
DDPSAQVPVPKAASEDASEVKARRDEEERERERREREREREKEKEKEREREKEKEKEKER
EREKQKQKESEKERESKEKEKGKHEDGRKKEAEVIKQLKAELKKAQESQKEMKLLLDMYR
SAPKEQRDKVQLMAAEKKAKAELEELRQRVKELEDKEKKESKKMADEDALRKIRAVEEQI
EYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSN
QIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSSIGTGEKELGLRTQALE
MNKRKAMDAAQLADDLKTQLELAQKKLHDFQDEIVENRVTREKEMFNFKRAEEDISRLRR
KLETTKKPDMVPNCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYD
TRQRKCPKCNAAFGANDFHRIYIG
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaattggcaataaaagggcagctggagaccctggcccttctgcacctccagag
aagaaggctggggttgaagactcgggaaccacagtggagactattaaactcggtggcgtt
tcttcaacggaggagatggacattcggacgctgcagacgaagaaccggaaactagcagag
atgcttgaccagcggcaagccattgaggatgagctgcgggagcacatagagaagctggag
cgtcggcaggccactgatgatgcctctttgctgatcatcaatcgttactggaatcagttt
gatgaaaacatccgcattatccttaaacgctttgacctggaccaaggtcttggagatctc
ctgtctgaaagaaaagcactggtggtaccagaacctgaaccagactcagacagtaatcag
gagcgcaaagatgagagagagcgaggtgaaggactggagccagcgttctccttcctagcc
accctagccagcagcactagtgaggagatagagtctcagctgcaagaacgtgtagagtcc
tcccggcgtgctgttgcccagatcgtcacaatgtatgacaagctgcaggaaaaagtggat
gtgctgtcccacaagctgaatagtggagatattacactgatggaagaagcagtcctggag
cttaattcctacctgtcacatgaaaatggacggctgcaggagctggctgatcttcttcag
gaaaaacatcgaatcatgtctcaggagttctccaagctgcaagagagagtggagacagca
gagtctcgtgtgtctgttctggagactatgattgatgaccttcaatggaatattgacaag
atccgcaagagagagcagcgtcttaaccggcacttagcagatgttctcgaacgggtaaat
tccaaaggctacaaggtgtatggagctgggagcagtctctatgggggcacaatcactatt
aatgcccgcaagtttgaggagatgaatgcagaactggaagagaataaagagcttgctggg
aaccgcctcaatgagttggaggaactgcgccaggatcttgcggaagtaacaacgcagaat
gaaaaacttaaggttgagctgcgacgagcagtggaggaggctgtgaaggagactccagaa
taccgctgcatgcagtcccaattttctgttttgtataatgagagtctccagctgaaggca
catcttgatgaggcccgcactctgcttcatggcacccgcaccacacaccagcgccaggtg
gaactgatcgagagggatgaggtcagccttcacaagaaactacgcacagaagttattcag
ctagaggacacgctagcacaagtccgcaaagagtatgagatgttgaggattgagtttgaa
cagacgcttgctgccaatgaacaagcaggtccaattaatcgagagatgcgtcatctcatc
agcagcctccaaaatcacaaccaccagctgaagggagaggtgttgagatacaagcgcaaa
ctgagagaggcccaatctgacttgagcaagatccgctctcgcagtggtagtactatctta
cagtcccagtccagcactgaagacacaaaggaggagcctccagagatcaaacaggagcca
gatgatccttctgcccaagtacctgtgcccaaggctgcttctgaagatgcgagtgaagtt
aaggccaggcgagatgaagaggaacgggagcgggaaagacgtgagagggagagggaacga
gagaaggaaaaggagaaagagagggagcgagagaaagagaaggaaaaggaaaaggagcgg
gagcgggaaaaacagaagcagaaggaatctgagaaggaaagagagtccaaagagaaggag
aaagggaaacatgaagatggaagaaagaaagaggctgaagtgatcaagcagctgaaggct
gagctcaagaaggcccaggagagccagaaggagatgaagctgttgttagatatgtaccgc
tctgcccccaaagaacagagagacaaagtgcagctgatggcagctgagaagaaagcaaaa
gctgagctggaagaactaaggcaaagggtgaaagaattggaagacaaggagaaaaaggag
agtaaaaagatggctgatgaggatgccctccgcaagattcgagcagtagaggaacagatt
gagtatttacagaagaaactagcgatggctaaacaggaggaggaggctctgctgtcagaa
atggatgtcacaggccaagcctttgaagacatgcaggaacagaacatccgcctgatgcag
cagctgcgggagaaggatgatgccaacttcaagctgatgtcagaacgcatcaagtccaac
cagatccacaagctgctgaaagaggagaaggaggagctggcagaccaagttttaacactg
aagacacaggtggatgcccagctgcaagttgtacgtaaactggaggagaaggaacactta
ctgcaaagcagtattggaacaggggagaaggagctaggcctccgaacacaggccctggaa
atgaacaaacgcaaggccatggatgcagcccagcttgcagatgacctgaaaacccagcta
gagctggctcagaagaagctacatgacttccaggatgagatagtggaaaacagagtaact
agagagaaagagatgttcaacttcaaaagggctgaggaagacatttctaggttacgcagg
aagctggagaccactaagaagcctgacatggttcccaactgtgatgagatattgatggaa
gaaatcaaggattacaaggcccgcctgacctgcccgtgctgtaacatgcgcaaaaaggat
gctgtcctcacaaagtgttttcatgtcttctgctttgagtgtgtgaaaacacgctatgac
acccggcagcgtaagtgccccaagtgcaatgctgcctttggagccaatgacttccacagg
atctacatcggttga
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