Cygnus atratus (black swan): 118257032
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Entry
118257032 CDS
T09349
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118257032 (TOPORS)
03036 Chromosome and associated proteins [BR:
cata03036
]
118257032 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cata03037
]
118257032 (TOPORS)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118257032 (TOPORS)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118257032 (TOPORS)
UBL E3 ligases
118257032 (TOPORS)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
118257032 (TOPORS)
Cilium and associated proteins [BR:
cata03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118257032 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
118257032
NCBI-ProteinID:
XP_035420468
LinkDB
All DBs
Position
Z:complement(73003146..73006954)
Genome browser
AA seq
976 aa
AA seq
DB search
MPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNKAECPLCKQPFFSIFHTV
RAEDDFEEYILRPTENGSFASPDGQRFRYRTTLTREHDASSYHQGSSSSLRTVSPPDNGI
LFEGLSSQLVQQSDGEIQQMIRRLALRRQASTEGRYVGHIPEEEMISFRRALYRTGMRVR
SIQDGGRYRDISAEFFLHNAACLHRLVPWLRRELIVLFGSHGSLATIVHHVIVRNITRYD
LESQAFADSLKPFLLNRTEHFLHEFISFARCPFNLEAYDHHANYDCPAPSYDEGSHSESS
IITISPDEVDSHGPDHRSSMTGIGQAPWDDETPGPSYSISDEVRTNMASPLETSESSDED
SAAKRTERQTQLQANADSNDSDSSLDNCVIVGYVKPLAERTPELVELSSDSEESIREEKR
EDVKKQQSVQCRSWSDSEQSRSSSPRSPVYKENVGSCRSSLSPAVEKTELKDEEKNKGKA
KALSPQDSIWSPSSERDMMCSPCNHRLSRRRKSRSPQSCSQNSQGSHDHQSRREHHSKRQ
LQKRRSRSRESSKHRSKRSRRRSRSPDTSVSQKSQRGSLSRESTTSREVSRSRSRSKGHG
KRRSRSRDSDQCHVRDSYQSRYHRGYAFYSRKTLGEGSSCRRRTQSSARCSRQSASPEYR
LQSFTEKTDPHSQKGLHERHYYYYERRRSRSRSSNRSGTPSGGADRTKSEKPGGKRKYKT
RHLESAVKESTSLERENDHKKNFSKLSDCYKNEDSLSDNQASSETKHKKKRKKMRSPSVE
IVYEGKVTDPTKHTKKKKKKHKKKHRKHHVHSSPVVITIDSDSGKEPESTECDSSVTWTG
ATRLNERENESPSSLLGMTGCEDVYRVSEETGEAAKKYSIPTGRRDFDGDIDMRNADAEP
QEAAGKSLVADTTSSNTTHTETVISCGQGAQATPSSQLSLPQSSLLECPERPPLILRLPK
RLVNRSCWSESPEKNM
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgccaacggatgcgtcccctgactccaagtgccccatttgcttggacagatttgacaat
gtcgcctatctagatcgttgcttgcacaggttctgtttccgttgcgtccaggagtggtcg
aagaacaaagcagaatgcccgctctgcaaacagcccttcttttccattttccatacggtt
cgtgctgaggatgactttgaggaatacatactcaggcctacggaaaatggctcttttgcc
agccctgatggccagaggtttcgttaccggaccaccttaacaagggaacacgacgcctcc
tcttaccaccaaggcagttcctcatctctaaggacagtgtcccctccggataatgggatt
ttgttcgaagggttgtcaagccagctggttcagcagagtgatggggagattcagcagatg
ataaggaggctggccttgaggagacaggccagcacagagggcagatatgtggggcacatt
ccggaggaggagatgatcagcttccgcagggccctgtaccgcacggggatgcgtgtccgt
agcattcaggacggcggccgctaccgagacatttcagcagagtttttcctccacaacgcc
gcttgccttcacaggttggttccctggctgaggcgagagcttatagtcttgttcggttcc
cacgggtctctggctaccatcgtgcaccatgtcattgtcaggaatatcaccaggtacgat
ctggagagtcaggccttcgctgatagtttgaagccatttttgctgaatcggaccgaacac
ttcctccatgaattcatcagttttgcccgttgtccatttaacttagaagcatacgatcac
catgccaattatgactgtcctgcaccgtcatatgatgaaggaagccactcagagtcgtca
atcattactatatctcccgatgaggtagattctcacgggccagaccaccgttcatccatg
actggtattggccaggccccctgggatgatgaaactccagggccttcctattccatttca
gatgaggtccgtacaaacatggcttctcctctggagacatcagaaagttctgatgaagac
tctgctgcaaagagaaccgaacgacagactcagttacaggcaaatgctgactcaaatgac
agtgactcttctttggacaattgtgttattgttgggtatgttaagccactagctgagagg
acaccagaactggttgagctgtcctcagactctgaggagtccatcagggaggagaaaagg
gaggatgtgaaaaaacagcagtcagtccagtgtcgtagctggagtgacagcgaacaaagc
aggagctcatcaccacgctcccctgtgtataaagagaatgtaggaagctgtaggagctcc
ttatcccctgcagtcgagaaaacagagttgaaggatgaggagaaaaacaaaggtaaagca
aaagctctgtctccacaggactcgatctggagcccctcttcggagagggacatgatgtgc
tccccttgcaatcacagattgtccagaaggagaaagtccaggagtccgcagtcctgttca
cagaacagtcaaggcagtcatgaccatcagtctaggagggagcatcacagcaaacgccag
cttcaaaagaggcgatcaagaagcagagagagcagcaaacataggagcaaaagaagcagg
aggaggtcgagatctcctgacactagtgtctcccaaaaaagccagagaggctcccttagt
cgtgagagcactacatccagggaagtaagcagatcacgatcgcgtagcaaaggccatggc
aaaaggagatcgaggagcagagacagtgaccaatgtcatgtaagagacagttaccaaagt
agataccaccggggttatgctttctatagtcgaaagacacttggagagggctcctcctgc
aggaggaggactcagtccagtgctcgctgttcaaggcagtctgctagtccggagtacagg
ttacagtcttttactgaaaagacagatccgcacagccagaagggactacatgagagacat
tattactattatgaacgacgcagatcaaggagtcgatcaagcaataggtcagggaccccg
tctggaggggctgacagaacgaaaagcgaaaagcccggtgggaaaaggaagtacaaaact
cggcacttggagagtgcagtgaaggagagcacaagtctagagagagaaaatgaccacaag
aaaaatttctcgaaactcagcgactgctacaaaaacgaagatagcctttcagacaatcaa
gcaagtagtgagacaaagcataagaaaaagaggaagaaaatgagaagcccaagtgtggag
atagtctatgaaggaaaagtgacagacccgacaaagcacacgaaaaagaagaagaaaaag
cataagaagaaacaccggaaacatcacgtacattcctctccagtggtgattacaattgat
agtgacagtggcaaggagccagaaagtactgaatgtgacagcagcgttacttggacaggc
gcaaccaggttaaacgagagggaaaatgagtctccatcatctcttctgggaatgacaggt
tgtgaagatgtttacagagtgagcgaggaaactggagaagcagccaaaaaatacagtatt
cctactggaagaagagacttcgatggtgacattgacatgagaaatgctgatgctgagcct
caagaagcagctgggaagagtctggtagcagatacgacaagcagcaacaccactcacaca
gaaactgtaattagctgtggtcaaggagcacaagcaacaccttccagtcaactgtcttta
ccccagtcttccttactagagtgtccagagagaccaccgttgatactacggctgccaaag
agacttgtcaacagatcctgttggtctgagtccccagaaaaaaacatgtag
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